RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 KIAA0753Q2KHM9 967 aa17.66■□□□□ 0.42
PTPN21-201ENST00000328736 DDX23Q9BUQ8 820 aaKnown RBP17.66■□□□□ 0.42
PTPN21-201ENST00000328736 PIK3R4Q99570 1358 aa17.66■□□□□ 0.42
PTPN21-201ENST00000328736 WASLO00401 505 aaPredicted RBP17.65■□□□□ 0.42
PTPN21-201ENST00000328736 NEK1Q96PY6 1258 aa17.65■□□□□ 0.42
PTPN21-201ENST00000328736 ORC3Q9UBD5 711 aaPredicted RBP17.65■□□□□ 0.42
PTPN21-201ENST00000328736 CKAP2LQ8IYA6 745 aa17.65■□□□□ 0.42
PTPN21-201ENST00000328736 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
PTPN21-201ENST00000328736 KRT13P13646 458 aa17.65■□□□□ 0.42
PTPN21-201ENST00000328736 CCDC155Q8N6L0 562 aa17.65■□□□□ 0.42
PTPN21-201ENST00000328736 TNPO1Q92973 898 aaKnown RBP17.65■□□□□ 0.42
PTPN21-201ENST00000328736 TRIM47Q96LD4 638 aa17.65■□□□□ 0.42
PTPN21-201ENST00000328736 RBM27Q9P2N5 1060 aaKnown RBP17.65■□□□□ 0.42
PTPN21-201ENST00000328736 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.65■□□□□ 0.42
PTPN21-201ENST00000328736 CKAP4Q07065 602 aaKnown RBP17.64■□□□□ 0.42
PTPN21-201ENST00000328736 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.64■□□□□ 0.42
PTPN21-201ENST00000328736 RRP9O43818 475 aaKnown RBP17.64■□□□□ 0.41
PTPN21-201ENST00000328736 CAVIN2O95810 425 aa17.64■□□□□ 0.41
PTPN21-201ENST00000328736 TSPY3P0CV98 308 aa17.64■□□□□ 0.41
PTPN21-201ENST00000328736 TSPY8P0CW00 308 aa17.64■□□□□ 0.41
PTPN21-201ENST00000328736 FLIIQ13045 1269 aa17.64■□□□□ 0.41
PTPN21-201ENST00000328736 IDI1Q13907 227 aa17.64■□□□□ 0.41
PTPN21-201ENST00000328736 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
PTPN21-201ENST00000328736 B4DLN1 442 aa17.64■□□□□ 0.41
PTPN21-201ENST00000328736 MRPL12P52815 198 aaKnown RBP17.64■□□□□ 0.41
PTPN21-201ENST00000328736 PRPHP41219 470 aa17.64■□□□□ 0.41
PTPN21-201ENST00000328736 TBC1D9Q6ZT07 1266 aa17.64■□□□□ 0.41
PTPN21-201ENST00000328736 ZNF354CQ86Y25 554 aa17.64■□□□□ 0.41
PTPN21-201ENST00000328736 TRMT1LQ7Z2T5 733 aaKnown RBP17.63■□□□□ 0.41
PTPN21-201ENST00000328736 CTAGE1Q96RT6 745 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 ZSCAN16Q9H4T2 348 aaPredicted RBP17.63■□□□□ 0.41
PTPN21-201ENST00000328736 JADE2Q9NQC1 790 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 PHACTR2O75167 634 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 KRT28Q7Z3Y7 464 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 MICU3Q86XE3 530 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 TMTC2Q8N394 836 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 SNRKQ9NRH2 765 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 RASAL2Q9UJF2 1139 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 NCOA1Q15788 1441 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 CUL7Q14999 1698 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 MCM5P33992 734 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 HSF2BPO75031 334 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 MAP3K9P80192 1104 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 WTAPQ15007 396 aa17.63■□□□□ 0.41
PTPN21-201ENST00000328736 NBPF6Q5VWK0 638 aa17.62■□□□□ 0.41
PTPN21-201ENST00000328736 NBPF5PQ86XG9 351 aaPredicted RBP17.62■□□□□ 0.41
PTPN21-201ENST00000328736 NBPF4Q96M43 638 aa17.62■□□□□ 0.41
PTPN21-201ENST00000328736 CNNM2Q9H8M5 875 aa17.62■□□□□ 0.41
PTPN21-201ENST00000328736 NSD2O96028 1365 aa17.62■□□□□ 0.41
PTPN21-201ENST00000328736 DHX29Q7Z478 1369 aaKnown RBP17.62■□□□□ 0.41
PTPN21-201ENST00000328736 TRMT1Q9NXH9 659 aaKnown RBP17.62■□□□□ 0.41
PTPN21-201ENST00000328736 A0A1W2PRG0 241 aa17.62■□□□□ 0.41
PTPN21-201ENST00000328736 RAB3IL1Q8TBN0 382 aa17.62■□□□□ 0.41
PTPN21-201ENST00000328736 GNAQP50148 359 aa17.62■□□□□ 0.41
PTPN21-201ENST00000328736 SNW1Q13573 536 aaKnown RBP17.62■□□□□ 0.41
PTPN21-201ENST00000328736 MMRN2Q9H8L6 949 aa17.62■□□□□ 0.41
PTPN21-201ENST00000328736 BIN1O00499 593 aa17.61■□□□□ 0.41
PTPN21-201ENST00000328736 ZFYP08048 801 aaPredicted RBP17.61■□□□□ 0.41
PTPN21-201ENST00000328736 HAND2P61296 217 aa17.61■□□□□ 0.41
PTPN21-201ENST00000328736 SNRPA1P09661 255 aaKnown RBP17.61■□□□□ 0.41
PTPN21-201ENST00000328736 NCBP1Q09161 790 aaKnown RBP17.61■□□□□ 0.41
PTPN21-201ENST00000328736 ISM2Q6H9L7 571 aa17.61■□□□□ 0.41
PTPN21-201ENST00000328736 SELENOOQ9BVL4 669 aa17.61■□□□□ 0.41
PTPN21-201ENST00000328736 KIF4AO95239 1232 aa17.61■□□□□ 0.41
PTPN21-201ENST00000328736 TICAM2Q86XR7 235 aa17.61■□□□□ 0.41
PTPN21-201ENST00000328736 VTI1AQ96AJ9 217 aa17.61■□□□□ 0.41
PTPN21-201ENST00000328736 IQCGQ9H095 443 aaKnown RBP17.61■□□□□ 0.41
PTPN21-201ENST00000328736 TFIP11Q9UBB9 837 aaKnown RBP17.61■□□□□ 0.41
PTPN21-201ENST00000328736 STAT6P42226 847 aa17.6■□□□□ 0.41
PTPN21-201ENST00000328736 IFIT1BQ5T764 474 aaKnown RBP17.6■□□□□ 0.41
PTPN21-201ENST00000328736 N4BP3O15049 544 aa17.6■□□□□ 0.41
PTPN21-201ENST00000328736 CYLC1P35663 651 aaPredicted RBP17.6■□□□□ 0.41
PTPN21-201ENST00000328736 IMPG2Q9BZV3 1241 aa17.6■□□□□ 0.41
PTPN21-201ENST00000328736 UVSSAQ2YD98 709 aa17.6■□□□□ 0.41
PTPN21-201ENST00000328736 RRAGBQ5VZM2 374 aa17.6■□□□□ 0.41
PTPN21-201ENST00000328736 NSRP1Q9H0G5 558 aaKnown RBP17.6■□□□□ 0.41
PTPN21-201ENST00000328736 AKR1B10O60218 316 aa17.59■□□□□ 0.41
PTPN21-201ENST00000328736 SCAF11Q99590 1463 aaKnown RBP17.59■□□□□ 0.41
PTPN21-201ENST00000328736 SPAG5Q96R06 1193 aa17.59■□□□□ 0.41
PTPN21-201ENST00000328736 CALCOCO1Q9P1Z2 691 aa17.59■□□□□ 0.41
PTPN21-201ENST00000328736 USP25Q9UHP3 1055 aa17.59■□□□□ 0.41
PTPN21-201ENST00000328736 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
PTPN21-201ENST00000328736 ESR2Q92731 530 aa17.59■□□□□ 0.41
PTPN21-201ENST00000328736 POLR3GO15318 223 aaPredicted RBP17.59■□□□□ 0.41
PTPN21-201ENST00000328736 RBM25P49756 843 aaKnown RBP17.59■□□□□ 0.41
PTPN21-201ENST00000328736 CHRNA2Q15822 529 aa17.59■□□□□ 0.41
PTPN21-201ENST00000328736 UBE2HP62256 183 aa17.58■□□□□ 0.4
PTPN21-201ENST00000328736 STX8Q9UNK0 236 aa17.58■□□□□ 0.4
PTPN21-201ENST00000328736 PANK2Q9BZ23 570 aa17.58■□□□□ 0.4
PTPN21-201ENST00000328736 TNNQ9UQP3 1299 aa17.58■□□□□ 0.4
PTPN21-201ENST00000328736 SYKP43405 635 aa17.58■□□□□ 0.4
PTPN21-201ENST00000328736 OGFOD1Q8N543 542 aa17.58■□□□□ 0.4
PTPN21-201ENST00000328736 OTUD6BQ8N6M0 293 aa17.58■□□□□ 0.4
PTPN21-201ENST00000328736 CCDC77Q9BR77 488 aa17.58■□□□□ 0.4
PTPN21-201ENST00000328736 STMN4Q9H169 189 aaPredicted RBP17.58■□□□□ 0.4
PTPN21-201ENST00000328736 SPAG1Q07617 926 aa17.57■□□□□ 0.4
PTPN21-201ENST00000328736 ZNF804AQ7Z570 1209 aa17.57■□□□□ 0.4
PTPN21-201ENST00000328736 SMARCC2Q8TAQ2 1214 aa17.57■□□□□ 0.4
PTPN21-201ENST00000328736 C16orf45Q96MC5 204 aaPredicted RBP17.57■□□□□ 0.4
PTPN21-201ENST00000328736 LRSAM1Q6UWE0 723 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms