RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 WTAPQ15007 396 aa10.37□□□□□ -0.75
CD28-201ENST00000324106 CCDC82Q8N4S0 544 aa10.37□□□□□ -0.75
CD28-201ENST00000324106 SMARCA5O60264 1052 aaPredicted RBP10.37□□□□□ -0.75
CD28-201ENST00000324106 TRAK2O60296 914 aa10.37□□□□□ -0.75
CD28-201ENST00000324106 ORAI2Q96SN7 254 aa10.37□□□□□ -0.75
CD28-201ENST00000324106 UBA5Q9GZZ9 404 aa10.37□□□□□ -0.75
CD28-201ENST00000324106 MTHFSDQ2M296 383 aaKnown RBP10.37□□□□□ -0.75
CD28-201ENST00000324106 VAT1LQ9HCJ6 419 aa10.37□□□□□ -0.75
CD28-201ENST00000324106 USP16Q9Y5T5 823 aa10.37□□□□□ -0.75
CD28-201ENST00000324106 NCBP1Q09161 790 aaKnown RBP10.37□□□□□ -0.75
CD28-201ENST00000324106 BRDTQ58F21 947 aaPredicted RBP10.37□□□□□ -0.75
CD28-201ENST00000324106 RBM26Q5T8P6 1007 aaKnown RBP10.37□□□□□ -0.75
CD28-201ENST00000324106 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.36□□□□□ -0.75
CD28-201ENST00000324106 SBNO1A3KN83 1393 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 METAP2P50579 478 aaKnown RBP eCLIP10.36□□□□□ -0.75
CD28-201ENST00000324106 JAKMIP3Q5VZ66 844 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 SLC4A4Q9Y6R1 1079 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 CALM1P0DP23 149 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 CALM2P0DP24 149 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 CALM3P0DP25 149 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 NEFHP12036 1026 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 DENND2AQ9ULE3 1009 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 PRAG1Q86YV5 1406 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 ASXL1Q8IXJ9 1541 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 IQCEQ6IPM2 695 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 CKAP2LQ8IYA6 745 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
CD28-201ENST00000324106 ALDH1B1P30837 517 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 LARGE2Q8N3Y3 721 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 TAF4BQ92750 862 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 NEK1Q96PY6 1258 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 BIN2Q9UBW5 565 aaPredicted RBP10.35□□□□□ -0.75
CD28-201ENST00000324106 ADCY10Q96PN6 1610 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 SLC9C2Q5TAH2 1124 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 FERMT2Q96AC1 680 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 GJA3Q9Y6H8 435 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 POLR3AO14802 1390 aaPredicted RBP10.35□□□□□ -0.75
CD28-201ENST00000324106 YEATS2Q9ULM3 1422 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 MAGEB6P1A0A0J9YX57 407 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 PICALMQ13492 652 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 IFIT1BQ5T764 474 aaKnown RBP10.35□□□□□ -0.75
CD28-201ENST00000324106 GGA1Q9UJY5 639 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 EIF2AK4Q9P2K8 1649 aaKnown RBP10.35□□□□□ -0.75
CD28-201ENST00000324106 KIF4AO95239 1232 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 MICU3Q86XE3 530 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 PICK1Q9NRD5 415 aa10.35□□□□□ -0.75
CD28-201ENST00000324106 ORC3Q9UBD5 711 aaPredicted RBP10.35□□□□□ -0.75
CD28-201ENST00000324106 CTAGE5O15320 804 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 TBCAO75347 108 aaKnown RBP10.34□□□□□ -0.75
CD28-201ENST00000324106 GPR162Q16538 588 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 DPY19L2Q6NUT2 758 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 KANK3Q6NY19 840 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 ZNF790Q6PG37 636 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 C6orf50Q9HD87 102 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 EDC4Q6P2E9 1401 aaKnown RBP10.34□□□□□ -0.75
CD28-201ENST00000324106 SSR1P43307 286 aaKnown RBP10.34□□□□□ -0.75
CD28-201ENST00000324106 SEPT7Q16181 437 aaKnown RBP10.34□□□□□ -0.75
CD28-201ENST00000324106 PRIM1P49642 420 aaKnown RBP10.34□□□□□ -0.75
CD28-201ENST00000324106 MAP3K11Q16584 847 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 CCDC174Q6PII3 467 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 CCDC191Q8NCU4 936 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 SMARCC2Q8TAQ2 1214 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 IQSEC3Q9UPP2 1182 aaPredicted RBP10.34□□□□□ -0.75
CD28-201ENST00000324106 ZFYVE16Q7Z3T8 1539 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 ATP7AQ04656 1500 aa10.34□□□□□ -0.75
CD28-201ENST00000324106 ZBTB43O43298 467 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 UFL1O94874 794 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 DPP8Q6V1X1 898 aaPredicted RBP10.33□□□□□ -0.76
CD28-201ENST00000324106 CACNA2D4Q7Z3S7 1137 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 PLBD2Q8NHP8 589 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 ARID3AQ99856 593 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 EPB41L2O43491 1005 aaKnown RBP10.33□□□□□ -0.76
CD28-201ENST00000324106 IDEP14735 1019 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 CALML3P27482 149 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 ATP8B2P98198 1209 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 BMP2KLQ5H9B9 411 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 NIM1KQ8IY84 436 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 TNPO1Q92973 898 aaKnown RBP10.33□□□□□ -0.76
CD28-201ENST00000324106 PLEKHG3A1L390 1219 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 RIMBP2O15034 1052 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 SYCP3Q8IZU3 236 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 ANO10Q9NW15 660 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 IVNS1ABPQ9Y6Y0 642 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 MCMDC2Q4G0Z9 681 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 FERMT3Q86UX7 667 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 WDR66Q8TBY9 1149 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 BACH2Q9BYV9 841 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 TMOD4Q9NZQ9 345 aa10.33□□□□□ -0.76
CD28-201ENST00000324106 SPDYE3A6NKU9 549 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 ERVV-2B6SEH9 535 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 FBLN1P23142 703 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 HAND2P61296 217 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 MAP3K9P80192 1104 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 JARID2Q92833 1246 aaPredicted RBP10.32□□□□□ -0.76
CD28-201ENST00000324106 MCM9Q9NXL9 1143 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 GOLGA6L10A6NI86 522 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 PDE8AO60658 829 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 ANKRD44Q8N8A2 993 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 H7C1D1 291 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms