RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 GJA8P48165 433 aa9.35□□□□□ -0.91
CSTF3-201ENST00000323959 PTCH2Q9Y6C5 1203 aa9.35□□□□□ -0.91
CSTF3-201ENST00000323959 PTCD1O75127 700 aaKnown RBP9.35□□□□□ -0.91
CSTF3-201ENST00000323959 DNAJC10Q8IXB1 793 aa9.34□□□□□ -0.91
CSTF3-201ENST00000323959 COL26A1Q96A83 441 aa9.34□□□□□ -0.91
CSTF3-201ENST00000323959 RGS20O76081 388 aa9.34□□□□□ -0.91
CSTF3-201ENST00000323959 SP3Q02447 781 aa9.34□□□□□ -0.91
CSTF3-201ENST00000323959 ATXN2LQ8WWM7 1075 aaKnown RBP9.34□□□□□ -0.91
CSTF3-201ENST00000323959 CDX2Q99626 313 aaPredicted RBP9.34□□□□□ -0.91
CSTF3-201ENST00000323959 LRFN3Q9BTN0 628 aa9.34□□□□□ -0.91
CSTF3-201ENST00000323959 RIC1Q4ADV7 1423 aa9.34□□□□□ -0.91
CSTF3-201ENST00000323959 SZT2Q5T011 3432 aa9.34□□□□□ -0.92
CSTF3-201ENST00000323959 A0A0C4DFX4 3053 aa9.33□□□□□ -0.92
CSTF3-201ENST00000323959 PPIP5K2O43314 1243 aa9.33□□□□□ -0.92
CSTF3-201ENST00000323959 GJB1P08034 283 aa9.33□□□□□ -0.92
CSTF3-201ENST00000323959 PIEZO1Q92508 2521 aa9.33□□□□□ -0.92
CSTF3-201ENST00000323959 GNRH1P01148 92 aa9.33□□□□□ -0.92
CSTF3-201ENST00000323959 EIF5P55010 431 aaKnown RBP9.33□□□□□ -0.92
CSTF3-201ENST00000323959 OLFM4Q6UX06 510 aa9.33□□□□□ -0.92
CSTF3-201ENST00000323959 IFNL1Q8IU54 200 aa9.33□□□□□ -0.92
CSTF3-201ENST00000323959 NECTIN2Q92692 538 aa9.33□□□□□ -0.92
CSTF3-201ENST00000323959 POLR2AP24928 1970 aaKnown RBP9.33□□□□□ -0.92
CSTF3-201ENST00000323959 RGL2O15211 777 aa9.32□□□□□ -0.92
CSTF3-201ENST00000323959 RPS12P25398 132 aaKnown RBP9.32□□□□□ -0.92
CSTF3-201ENST00000323959 TCIRG1Q13488 830 aa9.32□□□□□ -0.92
CSTF3-201ENST00000323959 PPARGC1BQ86YN6 1023 aaKnown RBP9.32□□□□□ -0.92
CSTF3-201ENST00000323959 MICALL2Q8IY33 904 aa9.32□□□□□ -0.92
CSTF3-201ENST00000323959 ZBTB1Q9Y2K1 713 aa9.32□□□□□ -0.92
CSTF3-201ENST00000323959 DDX60Q8IY21 1712 aaKnown RBP9.32□□□□□ -0.92
CSTF3-201ENST00000323959 KCNH6Q9H252 994 aa9.32□□□□□ -0.92
CSTF3-201ENST00000323959 ALPK3Q96L96 1907 aa9.32□□□□□ -0.92
CSTF3-201ENST00000323959 OTUD7BQ6GQQ9 843 aa9.31□□□□□ -0.92
CSTF3-201ENST00000323959 VSIG10Q8N0Z9 540 aa9.31□□□□□ -0.92
CSTF3-201ENST00000323959 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
CSTF3-201ENST00000323959 TMEM31Q5JXX7 168 aa9.3□□□□□ -0.92
CSTF3-201ENST00000323959 DLK2Q6UY11 383 aa9.3□□□□□ -0.92
CSTF3-201ENST00000323959 UHRF1Q96T88 793 aaPredicted RBP9.3□□□□□ -0.92
CSTF3-201ENST00000323959 RTFDC1Q9BY42 306 aaPredicted RBP9.3□□□□□ -0.92
CSTF3-201ENST00000323959 UBE2OQ9C0C9 1292 aaKnown RBP9.3□□□□□ -0.92
CSTF3-201ENST00000323959 SPRYD7Q5W111 196 aa9.29□□□□□ -0.92
CSTF3-201ENST00000323959 PUS7Q96PZ0 661 aaKnown RBP9.29□□□□□ -0.92
CSTF3-201ENST00000323959 MAGEA10P43363 369 aaPredicted RBP9.28□□□□□ -0.92
CSTF3-201ENST00000323959 MAP3K11Q16584 847 aa9.28□□□□□ -0.92
CSTF3-201ENST00000323959 HSP90AB2PQ58FF8 381 aa9.28□□□□□ -0.92
CSTF3-201ENST00000323959 NBPF5PQ86XG9 351 aaPredicted RBP9.28□□□□□ -0.92
CSTF3-201ENST00000323959 TTC28Q96AY4 2481 aa9.28□□□□□ -0.92
CSTF3-201ENST00000323959 UBR2Q8IWV8 1755 aa9.28□□□□□ -0.92
CSTF3-201ENST00000323959 ZBTB48P10074 688 aaPredicted RBP9.28□□□□□ -0.92
CSTF3-201ENST00000323959 FOSL2P15408 326 aa9.28□□□□□ -0.92
CSTF3-201ENST00000323959 HOXA10P31260 410 aaPredicted RBP9.28□□□□□ -0.92
CSTF3-201ENST00000323959 UBE2Q2LH0YL09 131 aa9.27□□□□□ -0.93
CSTF3-201ENST00000323959 CRY2Q49AN0 593 aa9.27□□□□□ -0.93
CSTF3-201ENST00000323959 ASB2Q96Q27 587 aa9.27□□□□□ -0.93
CSTF3-201ENST00000323959 GGA3Q9NZ52 723 aa9.27□□□□□ -0.93
CSTF3-201ENST00000323959 UNCXA6NJT0 531 aa9.27□□□□□ -0.93
CSTF3-201ENST00000323959 GPR37L1O60883 481 aa9.27□□□□□ -0.93
CSTF3-201ENST00000323959 RRS1Q15050 365 aaKnown RBP9.27□□□□□ -0.93
CSTF3-201ENST00000323959 AOC3Q16853 763 aa9.27□□□□□ -0.93
CSTF3-201ENST00000323959 SEMA6BQ9H3T3 888 aa9.27□□□□□ -0.93
CSTF3-201ENST00000323959 CRHR2Q13324 411 aa9.26□□□□□ -0.93
CSTF3-201ENST00000323959 KIF4BQ2VIQ3 1234 aa9.26□□□□□ -0.93
CSTF3-201ENST00000323959 TBC1D10BQ4KMP7 808 aaPredicted RBP9.26□□□□□ -0.93
CSTF3-201ENST00000323959 SH3TC2Q8TF17 1288 aa9.26□□□□□ -0.93
CSTF3-201ENST00000323959 TMX4Q9H1E5 349 aaPredicted RBP9.26□□□□□ -0.93
CSTF3-201ENST00000323959 TIMELESSQ9UNS1 1208 aa9.26□□□□□ -0.93
CSTF3-201ENST00000323959 ST18O60284 1047 aa9.26□□□□□ -0.93
CSTF3-201ENST00000323959 NF2P35240 595 aa9.26□□□□□ -0.93
CSTF3-201ENST00000323959 CLEC4GQ6UXB4 293 aa9.26□□□□□ -0.93
CSTF3-201ENST00000323959 IL27Q8NEV9 243 aa9.26□□□□□ -0.93
CSTF3-201ENST00000323959 PRAMEF22A3QJZ6 481 aa9.25□□□□□ -0.93
CSTF3-201ENST00000323959 CAMTA2O94983 1202 aa9.25□□□□□ -0.93
CSTF3-201ENST00000323959 STARD3NLO95772 234 aa9.25□□□□□ -0.93
CSTF3-201ENST00000323959 KIAA2012Q0VF49 1180 aa9.25□□□□□ -0.93
CSTF3-201ENST00000323959 PLEKHO1Q53GL0 409 aaPredicted RBP9.25□□□□□ -0.93
CSTF3-201ENST00000323959 TPTE2Q6XPS3 522 aa9.25□□□□□ -0.93
CSTF3-201ENST00000323959 CRAMP1Q96RY5 1269 aa9.25□□□□□ -0.93
CSTF3-201ENST00000323959 CCL5P13501 91 aa9.25□□□□□ -0.93
CSTF3-201ENST00000323959 IL6STP40189 918 aaPredicted RBP9.25□□□□□ -0.93
CSTF3-201ENST00000323959 AMOTQ4VCS5 1084 aa9.25□□□□□ -0.93
CSTF3-201ENST00000323959 ARMC9Q7Z3E5 817 aa9.25□□□□□ -0.93
CSTF3-201ENST00000323959 THEGQ9P2T0 379 aa9.25□□□□□ -0.93
CSTF3-201ENST00000323959 UBXN2AP68543 259 aa9.24□□□□□ -0.93
CSTF3-201ENST00000323959 MRPS5P82675 430 aaKnown RBP9.24□□□□□ -0.93
CSTF3-201ENST00000323959 MYLIPQ8WY64 445 aa9.24□□□□□ -0.93
CSTF3-201ENST00000323959 KIF20BQ96Q89 1820 aa9.24□□□□□ -0.93
CSTF3-201ENST00000323959 SHTN1A0MZ66 631 aa9.24□□□□□ -0.93
CSTF3-201ENST00000323959 KIF22Q14807 665 aa9.24□□□□□ -0.93
CSTF3-201ENST00000323959 ZNF652Q9Y2D9 606 aa9.24□□□□□ -0.93
CSTF3-201ENST00000323959 TAF1P21675 1872 aa9.24□□□□□ -0.93
CSTF3-201ENST00000323959 TESPA1A2RU30 521 aaPredicted RBP9.24□□□□□ -0.93
CSTF3-201ENST00000323959 IGF2BP3O00425 579 aaKnown RBP eCLIP9.24□□□□□ -0.93
CSTF3-201ENST00000323959 RAD17O75943 681 aa9.24□□□□□ -0.93
CSTF3-201ENST00000323959 CANXP27824 592 aaKnown RBP9.24□□□□□ -0.93
CSTF3-201ENST00000323959 LDLRAD1Q5T700 205 aa9.24□□□□□ -0.93
CSTF3-201ENST00000323959 C7orf61Q8IZ16 206 aa9.24□□□□□ -0.93
CSTF3-201ENST00000323959 SPTBN5Q9NRC6 3674 aaKnown RBP9.23□□□□□ -0.93
CSTF3-201ENST00000323959 U2AF1L4Q8WU68 220 aaKnown RBP9.23□□□□□ -0.93
CSTF3-201ENST00000323959 SGPL1O95470 568 aa9.23□□□□□ -0.93
CSTF3-201ENST00000323959 MTFR1Q15390 333 aa9.23□□□□□ -0.93
CSTF3-201ENST00000323959 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms