RNA–Protein interactions for RNA: ENST00000323929.7

MRE11-201, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRE11, Length 6,897 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-201ENST00000323929 EYA3Q99504 573 aa8.77□□□□□ -1.01
MRE11-201ENST00000323929 PAG1Q9NWQ8 432 aa8.77□□□□□ -1.01
MRE11-201ENST00000323929 METP08581 1390 aa8.77□□□□□ -1.01
MRE11-201ENST00000323929 RTL9Q8NET4 1388 aa8.77□□□□□ -1.01
MRE11-201ENST00000323929 RNF113AO15541 343 aaKnown RBP8.77□□□□□ -1.01
MRE11-201ENST00000323929 NLRP5P59047 1200 aa8.77□□□□□ -1.01
MRE11-201ENST00000323929 ERCC4Q92889 916 aaPredicted RBP8.77□□□□□ -1.01
MRE11-201ENST00000323929 TSG101Q99816 390 aa8.77□□□□□ -1.01
MRE11-201ENST00000323929 CHL1O00533 1208 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 METAP2P50579 478 aaKnown RBP eCLIP8.76□□□□□ -1.01
MRE11-201ENST00000323929 NBPF14Q5TI25 921 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 TSPYL6Q8N831 410 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 PLCG2P16885 1265 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 GJB2P29033 226 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 TRAPPC3LQ5T215 181 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 CNKSR2Q8WXI2 1034 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 UPF3BQ9BZI7 483 aaKnown RBP8.76□□□□□ -1.01
MRE11-201ENST00000323929 DNAI2Q9GZS0 605 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 ZHX3Q9H4I2 956 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 LAMC1P11047 1609 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 CYP7A1P22680 504 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 RUFY1Q96T51 708 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 TANGO6Q9C0B7 1094 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 ZBTB40Q9NUA8 1239 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 TRPM1Q7Z4N2 1603 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 POLD1P28340 1107 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 SLC4A4Q9Y6R1 1079 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 CCDC194A0A1B0GVG4 234 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 TSPY2A6NKD2 308 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 GRPEL1Q9HAV7 217 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 LMTK2Q8IWU2 1503 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 MAGEB6P1A0A0J9YX57 407 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 PPP4R3AQ6IN85 833 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 CCDC191Q8NCU4 936 aa8.76□□□□□ -1.01
MRE11-201ENST00000323929 KIF20AO95235 890 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 IARSP41252 1262 aaKnown RBP8.75□□□□□ -1.01
MRE11-201ENST00000323929 TEX35Q5T0J7 233 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 ANO10Q9NW15 660 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 NAA16Q6N069 864 aaPredicted RBP8.75□□□□□ -1.01
MRE11-201ENST00000323929 MPHOSPH6Q99547 160 aaKnown RBP8.75□□□□□ -1.01
MRE11-201ENST00000323929 TRIM35Q9UPQ4 493 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 PCDHB15Q9Y5E8 787 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 CAMSAP1Q5T5Y3 1602 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 FGFR1OPO95684 399 aaKnown RBP8.75□□□□□ -1.01
MRE11-201ENST00000323929 BRPF1P55201 1214 aaPredicted RBP8.75□□□□□ -1.01
MRE11-201ENST00000323929 PIBF1Q8WXW3 757 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 ESR2Q92731 530 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 JARID2Q92833 1246 aaPredicted RBP8.75□□□□□ -1.01
MRE11-201ENST00000323929 ZSCAN16Q9H4T2 348 aaPredicted RBP8.75□□□□□ -1.01
MRE11-201ENST00000323929 BICC1Q9H694 974 aaKnown RBP8.75□□□□□ -1.01
MRE11-201ENST00000323929 SNRKQ9NRH2 765 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 HELLSQ9NRZ9 838 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 USP16Q9Y5T5 823 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 RNF17Q9BXT8 1623 aaKnown RBP8.75□□□□□ -1.01
MRE11-201ENST00000323929 CDC42BPBQ9Y5S2 1711 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 PPP1R12BO60237 982 aaPredicted RBP8.75□□□□□ -1.01
MRE11-201ENST00000323929 CALM1P0DP23 149 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 CALM2P0DP24 149 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 CALM3P0DP25 149 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 LRRC27Q9C0I9 530 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 CCDC87Q9NVE4 849 aa8.75□□□□□ -1.01
MRE11-201ENST00000323929 USP6P35125 1406 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 WTAPQ15007 396 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 TBC1D2Q9BYX2 928 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 DDX19AQ9NUU7 478 aaKnown RBP8.74□□□□□ -1.01
MRE11-201ENST00000323929 TFCP2Q12800 502 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 DENND2AQ9ULE3 1009 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 BMP15O95972 392 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 SSBP05455 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
MRE11-201ENST00000323929 GNAQP50148 359 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 NMIQ13287 307 aaPredicted RBP8.74□□□□□ -1.01
MRE11-201ENST00000323929 ZNF219Q9P2Y4 722 aaPredicted RBP8.74□□□□□ -1.01
MRE11-201ENST00000323929 TSPY3P0CV98 308 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 TSPY8P0CW00 308 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 DEF6Q9H4E7 631 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 TFCP2L1Q9NZI6 479 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 CCNL1Q9UK58 526 aaPredicted RBP8.74□□□□□ -1.01
MRE11-201ENST00000323929 A2ML1A8K2U0 1454 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 STX6O43752 255 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 PDE8AO60658 829 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 TRIM21P19474 475 aaKnown RBP8.74□□□□□ -1.01
MRE11-201ENST00000323929 CCDC148Q8NFR7 591 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 TMEM94Q12767 1356 aa8.74□□□□□ -1.01
MRE11-201ENST00000323929 CWF19L2Q2TBE0 894 aaKnown RBP8.73□□□□□ -1.01
MRE11-201ENST00000323929 KANK3Q6NY19 840 aa8.73□□□□□ -1.01
MRE11-201ENST00000323929 GNPATO15228 680 aa8.73□□□□□ -1.01
MRE11-201ENST00000323929 CERS3Q8IU89 383 aa8.73□□□□□ -1.01
MRE11-201ENST00000323929 ZNF397Q8NF99 534 aaPredicted RBP8.73□□□□□ -1.01
MRE11-201ENST00000323929 SNX21Q969T3 373 aa8.73□□□□□ -1.01
MRE11-201ENST00000323929 RBM8AQ9Y5S9 174 aaKnown RBP8.73□□□□□ -1.01
MRE11-201ENST00000323929 ZC3H13Q5T200 1668 aaKnown RBP8.73□□□□□ -1.01
MRE11-201ENST00000323929 GLI2P10070 1586 aa8.73□□□□□ -1.01
MRE11-201ENST00000323929 AMPD3Q01432 767 aa8.73□□□□□ -1.01
MRE11-201ENST00000323929 STK32BQ9NY57 414 aa8.73□□□□□ -1.01
MRE11-201ENST00000323929 RBM27Q9P2N5 1060 aaKnown RBP8.73□□□□□ -1.01
MRE11-201ENST00000323929 CDK12Q9NYV4 1490 aaPredicted RBP8.73□□□□□ -1.01
MRE11-201ENST00000323929 ZBTB7BO15156 539 aaPredicted RBP8.73□□□□□ -1.01
MRE11-201ENST00000323929 MATR3P43243 847 aaKnown RBP eCLIP8.73□□□□□ -1.012e-7■■■□□ 14.9
MRE11-201ENST00000323929 IFIT1BQ5T764 474 aaKnown RBP8.73□□□□□ -1.01
MRE11-201ENST00000323929 KDRP35968 1356 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms