RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 TTC22Q5TAA0 569 aa20.5■□□□□ 0.87
PXN-203ENST00000323871 RBM27Q9P2N5 1060 aaKnown RBP20.5■□□□□ 0.87
PXN-203ENST00000323871 USO1O60763 962 aaKnown RBP20.5■□□□□ 0.87
PXN-203ENST00000323871 GUCY1B3Q02153 619 aa20.5■□□□□ 0.87
PXN-203ENST00000323871 KIAA0556O60303 1618 aa20.49■□□□□ 0.87
PXN-203ENST00000323871 SYCP3Q8IZU3 236 aa20.49■□□□□ 0.87
PXN-203ENST00000323871 FAM177A1Q8N128 213 aaPredicted RBP20.49■□□□□ 0.87
PXN-203ENST00000323871 YEATS4O95619 227 aa20.49■□□□□ 0.87
PXN-203ENST00000323871 IFIT1BQ5T764 474 aaKnown RBP20.49■□□□□ 0.87
PXN-203ENST00000323871 LIG1P18858 919 aa20.49■□□□□ 0.87
PXN-203ENST00000323871 CAMK4Q16566 473 aa20.49■□□□□ 0.87
PXN-203ENST00000323871 SLC26A6Q9BXS9 759 aa20.49■□□□□ 0.87
PXN-203ENST00000323871 TNNI2P48788 182 aa20.49■□□□□ 0.87
PXN-203ENST00000323871 ESPNB1AK53 854 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 CCDC40Q4G0X9 1142 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 MICU3Q86XE3 530 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 GBP3Q9H0R5 595 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 TSPYL1Q9H0U9 437 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 STX8Q9UNK0 236 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 ADAMTS12P58397 1594 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 RMND1Q9NWS8 449 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 C11orf95C9JLR9 678 aaPredicted RBP20.48■□□□□ 0.87
PXN-203ENST00000323871 CALM1P0DP23 149 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 CALM2P0DP24 149 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 CALM3P0DP25 149 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 PRDM10Q9NQV6 1147 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
PXN-203ENST00000323871 TRAPPC3LQ5T215 181 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 TRAPPC8Q9Y2L5 1435 aa20.48■□□□□ 0.87
PXN-203ENST00000323871 SLC39A6Q13433 755 aa20.47■□□□□ 0.87
PXN-203ENST00000323871 LMBR1LQ6UX01 489 aa20.47■□□□□ 0.87
PXN-203ENST00000323871 MAGEB6P1A0A0J9YX57 407 aa20.47■□□□□ 0.87
PXN-203ENST00000323871 MTIF2P46199 727 aaKnown RBP20.47■□□□□ 0.87
PXN-203ENST00000323871 FSIP1Q8NA03 581 aa20.47■□□□□ 0.87
PXN-203ENST00000323871 LINS1Q8NG48 757 aa20.47■□□□□ 0.87
PXN-203ENST00000323871 GCP02774 474 aa20.47■□□□□ 0.87
PXN-203ENST00000323871 HAND2P61296 217 aa20.47■□□□□ 0.87
PXN-203ENST00000323871 KIF5CO60282 957 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 ZSCAN16Q9H4T2 348 aaPredicted RBP20.46■□□□□ 0.87
PXN-203ENST00000323871 CTTNBP2Q8WZ74 1663 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 CCDC174Q6PII3 467 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 TAX1BP1Q86VP1 789 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 RTL9Q8NET4 1388 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 GJB2P29033 226 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 IP6K1Q92551 441 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 SHANK2Q9UPX8 1470 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 ABCC2Q92887 1545 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 ZBTB43O43298 467 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 CCDC172P0C7W6 258 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 MCMDC2Q4G0Z9 681 aa20.46■□□□□ 0.87
PXN-203ENST00000323871 ATP8B2P98198 1209 aa20.45■□□□□ 0.86
PXN-203ENST00000323871 CCDC91Q7Z6B0 441 aa20.45■□□□□ 0.86
PXN-203ENST00000323871 FERMT1Q9BQL6 677 aa20.45■□□□□ 0.86
PXN-203ENST00000323871 IDEP14735 1019 aa20.45■□□□□ 0.86
PXN-203ENST00000323871 MCM3P25205 808 aa20.45■□□□□ 0.86
PXN-203ENST00000323871 BICD1Q96G01 975 aa20.45■□□□□ 0.86
PXN-203ENST00000323871 PRAG1Q86YV5 1406 aa20.45■□□□□ 0.86
PXN-203ENST00000323871 IRS4O14654 1257 aaPredicted RBP20.45■□□□□ 0.86
PXN-203ENST00000323871 ANXA1P04083 346 aa20.45■□□□□ 0.86
PXN-203ENST00000323871 CCDC97Q96F63 343 aaPredicted RBP20.45■□□□□ 0.86
PXN-203ENST00000323871 F8W031 263 aaPredicted RBP20.44■□□□□ 0.86
PXN-203ENST00000323871 PICALMQ13492 652 aa20.44■□□□□ 0.86
PXN-203ENST00000323871 RTN1Q16799 776 aa20.44■□□□□ 0.86
PXN-203ENST00000323871 CCDC144CPQ8IYA2 1237 aa20.44■□□□□ 0.86
PXN-203ENST00000323871 NUP88Q99567 741 aaPredicted RBP20.44■□□□□ 0.86
PXN-203ENST00000323871 HDAC1Q13547 482 aaPredicted RBP20.44■□□□□ 0.86
PXN-203ENST00000323871 SMARCC2Q8TAQ2 1214 aa20.44■□□□□ 0.86
PXN-203ENST00000323871 CABLES1Q8TDN4 633 aa20.44■□□□□ 0.86
PXN-203ENST00000323871 CENPHQ9H3R5 247 aa20.44■□□□□ 0.86
PXN-203ENST00000323871 YTHDC2Q9H6S0 1430 aaKnown RBP20.44■□□□□ 0.86
PXN-203ENST00000323871 KIAA0754O94854 1291 aa20.43■□□□□ 0.86
PXN-203ENST00000323871 PARP10Q53GL7 1025 aa20.43■□□□□ 0.86
PXN-203ENST00000323871 ATP10AO60312 1499 aa20.43■□□□□ 0.86
PXN-203ENST00000323871 RBM25P49756 843 aaKnown RBP20.43■□□□□ 0.86
PXN-203ENST00000323871 JARID2Q92833 1246 aaPredicted RBP20.43■□□□□ 0.86
PXN-203ENST00000323871 HSPA2P54652 639 aa20.43■□□□□ 0.86
PXN-203ENST00000323871 MTHFSDQ2M296 383 aaKnown RBP20.43■□□□□ 0.86
PXN-203ENST00000323871 SH2D4AQ9H788 454 aa20.43■□□□□ 0.86
PXN-203ENST00000323871 VEZTQ9HBM0 779 aa20.43■□□□□ 0.86
PXN-203ENST00000323871 POLR3AO14802 1390 aaPredicted RBP20.43■□□□□ 0.86
PXN-203ENST00000323871 TDRD12Q587J7 1177 aaKnown RBP20.43■□□□□ 0.86
PXN-203ENST00000323871 CKAP2LQ8IYA6 745 aa20.43■□□□□ 0.86
PXN-203ENST00000323871 NFATC2IPQ8NCF5 419 aa20.43■□□□□ 0.86
PXN-203ENST00000323871 SYCE3A1L190 88 aa20.43■□□□□ 0.86
PXN-203ENST00000323871 EXOC1Q9NV70 894 aa20.43■□□□□ 0.86
PXN-203ENST00000323871 KLF18A0A0U1RQI7 1052 aa20.42■□□□□ 0.86
PXN-203ENST00000323871 STX1AQ16623 288 aa20.42■□□□□ 0.86
PXN-203ENST00000323871 STX6O43752 255 aa20.42■□□□□ 0.86
PXN-203ENST00000323871 TCERG1LQ5VWI1 586 aa20.42■□□□□ 0.86
PXN-203ENST00000323871 TBC1D9Q6ZT07 1266 aa20.42■□□□□ 0.86
PXN-203ENST00000323871 BTG4Q9NY30 223 aa20.42■□□□□ 0.86
PXN-203ENST00000323871 CCDC102BQ68D86 513 aa20.42■□□□□ 0.86
PXN-203ENST00000323871 TTC41PQ6P2S7 1318 aa20.42■□□□□ 0.86
PXN-203ENST00000323871 MRPL50Q8N5N7 158 aaKnown RBP20.42■□□□□ 0.86
PXN-203ENST00000323871 SLC9C2Q5TAH2 1124 aa20.41■□□□□ 0.86
PXN-203ENST00000323871 C6orf50Q9HD87 102 aa20.41■□□□□ 0.86
PXN-203ENST00000323871 RNMTO43148 476 aaKnown RBP20.41■□□□□ 0.86
PXN-203ENST00000323871 KCNA6P17658 529 aa20.41■□□□□ 0.86
PXN-203ENST00000323871 HOXC9P31274 260 aa20.41■□□□□ 0.86
PXN-203ENST00000323871 C20orf194Q5TEA3 1177 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms