RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 PRIM1P49642 420 aaKnown RBP18.94■□□□□ 0.62
SMARCD2-202ENST00000323347 RNF20Q5VTR2 975 aa18.94■□□□□ 0.62
SMARCD2-202ENST00000323347 SMC3Q9UQE7 1217 aa18.94■□□□□ 0.62
SMARCD2-202ENST00000323347 PIP4K2AP48426 406 aaPredicted RBP18.94■□□□□ 0.62
SMARCD2-202ENST00000323347 RBSNQ9H1K0 784 aa18.94■□□□□ 0.62
SMARCD2-202ENST00000323347 ABCA3Q99758 1704 aa18.93■□□□□ 0.62
SMARCD2-202ENST00000323347 SHANK3Q9BYB0 1731 aa18.93■□□□□ 0.62
SMARCD2-202ENST00000323347 ATP5J2-PTCD1G3V325 749 aa18.93■□□□□ 0.62
SMARCD2-202ENST00000323347 PTCD1O75127 700 aaKnown RBP18.93■□□□□ 0.62
SMARCD2-202ENST00000323347 LARGE1O95461 756 aa18.93■□□□□ 0.62
SMARCD2-202ENST00000323347 IL2RBP14784 551 aa18.93■□□□□ 0.62
SMARCD2-202ENST00000323347 CPA1P15085 419 aa18.93■□□□□ 0.62
SMARCD2-202ENST00000323347 TOM1L2Q6ZVM7 507 aa18.93■□□□□ 0.62
SMARCD2-202ENST00000323347 HAUS7Q99871 368 aa18.93■□□□□ 0.62
SMARCD2-202ENST00000323347 TAF5LO75529 589 aa18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 SYAP1Q96A49 352 aaPredicted RBP18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 ATG3Q9NT62 314 aa18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 CWC25Q9NXE8 425 aaPredicted RBP18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 SLAIN2Q9P270 581 aa18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 ESPNB1AK53 854 aa18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 TJP1Q07157 1748 aa18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 ST3GAL1Q11201 340 aa18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 ANKRD1Q15327 319 aa18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 USP48Q86UV5 1035 aa18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 CCDC191Q8NCU4 936 aa18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 ANP32BQ92688 251 aaKnown RBP18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 PDLIM2Q96JY6 352 aa18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 ATP6V1DQ9Y5K8 247 aa18.92■□□□□ 0.62
SMARCD2-202ENST00000323347 F13A1P00488 732 aa18.91■□□□□ 0.62
SMARCD2-202ENST00000323347 LMBR1LQ6UX01 489 aa18.91■□□□□ 0.62
SMARCD2-202ENST00000323347 ME3Q16798 604 aa18.9■□□□□ 0.62
SMARCD2-202ENST00000323347 HS1BP3Q53T59 392 aa18.9■□□□□ 0.62
SMARCD2-202ENST00000323347 TTLL7Q6ZT98 887 aa18.9■□□□□ 0.62
SMARCD2-202ENST00000323347 ATG9AQ7Z3C6 839 aa18.9■□□□□ 0.62
SMARCD2-202ENST00000323347 JARID2Q92833 1246 aaPredicted RBP18.9■□□□□ 0.62
SMARCD2-202ENST00000323347 TRIM44Q96DX7 344 aaPredicted RBP18.9■□□□□ 0.62
SMARCD2-202ENST00000323347 RPS6KB1P23443 525 aa18.9■□□□□ 0.62
SMARCD2-202ENST00000323347 KCNJ4P48050 445 aa18.9■□□□□ 0.62
SMARCD2-202ENST00000323347 ZNF589Q86UQ0 364 aaPredicted RBP18.9■□□□□ 0.62
SMARCD2-202ENST00000323347 GJB2P29033 226 aa18.89■□□□□ 0.61
SMARCD2-202ENST00000323347 KRT32Q14532 448 aa18.89■□□□□ 0.61
SMARCD2-202ENST00000323347 CCDC83Q8IWF9 413 aa18.89■□□□□ 0.61
SMARCD2-202ENST00000323347 DBNDD2Q9BQY9 259 aa18.89■□□□□ 0.61
SMARCD2-202ENST00000323347 MTMR6Q9Y217 621 aa18.89■□□□□ 0.61
SMARCD2-202ENST00000323347 SYCE3A1L190 88 aa18.88■□□□□ 0.61
SMARCD2-202ENST00000323347 CIAO1O76071 339 aa18.88■□□□□ 0.61
SMARCD2-202ENST00000323347 IL15P40933 162 aaPredicted RBP18.88■□□□□ 0.61
SMARCD2-202ENST00000323347 BLOC1S2Q6QNY1 142 aa18.88■□□□□ 0.61
SMARCD2-202ENST00000323347 TPCN1Q9ULQ1 816 aa18.88■□□□□ 0.61
SMARCD2-202ENST00000323347 PALLDQ8WX93 1383 aa18.88■□□□□ 0.61
SMARCD2-202ENST00000323347 GADD45BO75293 160 aaPredicted RBP18.88■□□□□ 0.61
SMARCD2-202ENST00000323347 TRIM28Q13263 835 aaKnown RBP18.88■□□□□ 0.61
SMARCD2-202ENST00000323347 LARP6Q9BRS8 491 aaKnown RBP18.88■□□□□ 0.61
SMARCD2-202ENST00000323347 ISCA1Q9BUE6 129 aa18.88■□□□□ 0.61
SMARCD2-202ENST00000323347 PHF14O94880 888 aa18.87■□□□□ 0.61
SMARCD2-202ENST00000323347 A1BGP04217 495 aa18.87■□□□□ 0.61
SMARCD2-202ENST00000323347 KBTBD3Q8NAB2 608 aa18.87■□□□□ 0.61
SMARCD2-202ENST00000323347 U3KPZ7 1027 aaPredicted RBP18.87■□□□□ 0.61
SMARCD2-202ENST00000323347 SH3TC1Q8TE82 1336 aa18.87■□□□□ 0.61
SMARCD2-202ENST00000323347 UBE2HP62256 183 aa18.86■□□□□ 0.61
SMARCD2-202ENST00000323347 EDC3Q96F86 508 aaKnown RBP18.86■□□□□ 0.61
SMARCD2-202ENST00000323347 FBXO3Q9UK99 471 aa18.86■□□□□ 0.61
SMARCD2-202ENST00000323347 ZNF609O15014 1411 aa18.86■□□□□ 0.61
SMARCD2-202ENST00000323347 MCMDC2Q4G0Z9 681 aa18.86■□□□□ 0.61
SMARCD2-202ENST00000323347 VSIG10Q8N0Z9 540 aa18.86■□□□□ 0.61
SMARCD2-202ENST00000323347 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.86■□□□□ 0.61
SMARCD2-202ENST00000323347 LETM1O95202 739 aaPredicted RBP18.85■□□□□ 0.61
SMARCD2-202ENST00000323347 TOB2Q14106 344 aaPredicted RBP18.85■□□□□ 0.61
SMARCD2-202ENST00000323347 CSPP1Q1MSJ5 1256 aa18.85■□□□□ 0.61
SMARCD2-202ENST00000323347 CNPY2Q9Y2B0 182 aa18.85■□□□□ 0.61
SMARCD2-202ENST00000323347 NHSL1Q5SYE7 1610 aa18.85■□□□□ 0.61
SMARCD2-202ENST00000323347 EYA2O00167 538 aa18.84■□□□□ 0.61
SMARCD2-202ENST00000323347 TEX13AQ9BXU3 409 aaPredicted RBP18.84■□□□□ 0.61
SMARCD2-202ENST00000323347 HELLSQ9NRZ9 838 aa18.84■□□□□ 0.61
SMARCD2-202ENST00000323347 TOGARAM1Q9Y4F4 1720 aa18.84■□□□□ 0.61
SMARCD2-202ENST00000323347 SPEF2Q9C093 1822 aa18.84■□□□□ 0.61
SMARCD2-202ENST00000323347 PDCP20941 246 aa18.84■□□□□ 0.61
SMARCD2-202ENST00000323347 TSPY26PQ9H489 355 aa18.84■□□□□ 0.61
SMARCD2-202ENST00000323347 GDPD2Q9HCC8 539 aa18.84■□□□□ 0.61
SMARCD2-202ENST00000323347 TAF6LQ9Y6J9 622 aa18.84■□□□□ 0.61
SMARCD2-202ENST00000323347 TCIRG1Q13488 830 aa18.83■□□□□ 0.6
SMARCD2-202ENST00000323347 COL9A3Q14050 684 aaPredicted RBP18.83■□□□□ 0.6
SMARCD2-202ENST00000323347 PLA2G12BQ9BX93 195 aa18.83■□□□□ 0.6
SMARCD2-202ENST00000323347 CCDC183Q5T5S1 534 aa18.82■□□□□ 0.6
SMARCD2-202ENST00000323347 POTEAQ6S8J7 498 aa18.82■□□□□ 0.6
SMARCD2-202ENST00000323347 ZSCAN30Q86W11 494 aa18.82■□□□□ 0.6
SMARCD2-202ENST00000323347 NECAB1Q8N987 351 aa18.82■□□□□ 0.6
SMARCD2-202ENST00000323347 PKNOX2Q96KN3 472 aa18.82■□□□□ 0.6
SMARCD2-202ENST00000323347 NEK1Q96PY6 1258 aa18.82■□□□□ 0.6
SMARCD2-202ENST00000323347 DDX54Q8TDD1 881 aaKnown RBP18.81■□□□□ 0.6
SMARCD2-202ENST00000323347 DNAJC2Q99543 621 aaKnown RBP18.81■□□□□ 0.6
SMARCD2-202ENST00000323347 DSCC1Q9BVC3 393 aa18.81■□□□□ 0.6
SMARCD2-202ENST00000323347 TCHHQ07283 1943 aa18.81■□□□□ 0.6
SMARCD2-202ENST00000323347 UVSSAQ2YD98 709 aa18.8■□□□□ 0.6
SMARCD2-202ENST00000323347 ZMYM1Q5SVZ6 1142 aa18.8■□□□□ 0.6
SMARCD2-202ENST00000323347 FAM184AQ8NB25 1140 aa18.8■□□□□ 0.6
SMARCD2-202ENST00000323347 ZBTB3Q9H5J0 574 aa18.8■□□□□ 0.6
SMARCD2-202ENST00000323347 PAG1Q9NWQ8 432 aa18.8■□□□□ 0.6
SMARCD2-202ENST00000323347 EVA1CP58658 441 aa18.8■□□□□ 0.6
SMARCD2-202ENST00000323347 FOXD4L6Q3SYB3 417 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms