RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ZSWIM6Q9HCJ5 1215 aa14.85□□□□□ -0.03
DNMT3A-202ENST00000321117 ERICH2A1L162 156 aa14.85□□□□□ -0.03
DNMT3A-202ENST00000321117 AKAP4Q5JQC9 854 aa14.85□□□□□ -0.03
DNMT3A-202ENST00000321117 POLR3DP05423 398 aaPredicted RBP14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 HOXB7P09629 217 aa14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 MCMDC2Q4G0Z9 681 aa14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 HSP90B2PQ58FF3 399 aa14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 TMEM87AQ8NBN3 555 aa14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 CCDC150Q8NCX0 1101 aa14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 MRPS27Q92552 414 aaKnown RBP14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 CEBPAP49715 358 aaPredicted RBP14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 ADCK5Q3MIX3 580 aa14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 KIAA1524Q8TCG1 905 aa14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 VIRMAQ69YN4 1812 aaKnown RBP14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 CDKL5O76039 1030 aa14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 SLU7O95391 586 aaKnown RBP14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 CABP4P57796 275 aa14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 SIRT1Q96EB6 747 aa14.84□□□□□ -0.03
DNMT3A-202ENST00000321117 LRMPQ12912 555 aa14.83□□□□□ -0.03
DNMT3A-202ENST00000321117 BICC1Q9H694 974 aaKnown RBP14.83□□□□□ -0.03
DNMT3A-202ENST00000321117 TPCN1Q9ULQ1 816 aa14.83□□□□□ -0.03
DNMT3A-202ENST00000321117 METP08581 1390 aa14.83□□□□□ -0.03
DNMT3A-202ENST00000321117 ZNF397Q8NF99 534 aaPredicted RBP14.83□□□□□ -0.04
DNMT3A-202ENST00000321117 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.83□□□□□ -0.04
DNMT3A-202ENST00000321117 ARHGAP31Q2M1Z3 1444 aa14.83□□□□□ -0.04
DNMT3A-202ENST00000321117 ATP10DQ9P241 1426 aa14.83□□□□□ -0.04
DNMT3A-202ENST00000321117 ZSCAN12O43309 604 aa14.83□□□□□ -0.04
DNMT3A-202ENST00000321117 TOP1P11387 765 aaKnown RBP14.83□□□□□ -0.04
DNMT3A-202ENST00000321117 BMS1Q14692 1282 aaKnown RBP14.83□□□□□ -0.04
DNMT3A-202ENST00000321117 CCDC57Q2TAC2 916 aa14.83□□□□□ -0.04
DNMT3A-202ENST00000321117 ORC3Q9UBD5 711 aaPredicted RBP14.83□□□□□ -0.04
DNMT3A-202ENST00000321117 TBC1D2BQ9UPU7 963 aa14.83□□□□□ -0.04
DNMT3A-202ENST00000321117 GOLGA8BA8MQT2 603 aa14.83□□□□□ -0.04
DNMT3A-202ENST00000321117 KIF20AO95235 890 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 ADGRB2O60241 1585 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 ATP5J2-PTCD1G3V325 749 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 PTCD1O75127 700 aaKnown RBP14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 ZC3H6P61129 1189 aaKnown RBP14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 TTLL5Q6EMB2 1281 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 LGR6Q9HBX8 967 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 CWC15Q9P013 229 aaKnown RBP14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 DACH1Q9UI36 760 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 AK9Q5TCS8 1911 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 NEURL4Q96JN8 1562 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 IPO7O95373 1038 aaKnown RBP14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 ISM2Q6H9L7 571 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 ZSCAN25Q6NSZ9 544 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 XAGE3Q8WTP9 111 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 ACBD3Q9H3P7 528 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 USP16Q9Y5T5 823 aa14.82□□□□□ -0.04
DNMT3A-202ENST00000321117 PTPDC1A2A3K4 754 aa14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 ANKRD13DQ6ZTN6 518 aa14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 COPS6Q7L5N1 327 aa14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 PRR36Q9H6K5 1346 aa14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 LARGE1O95461 756 aa14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 EIF4A1P60842 406 aaKnown RBP14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 FILIP1LQ4L180 1135 aa14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 STK11IPQ8N1F8 1099 aa14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 JAK2O60674 1132 aa14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 APOBRQ0VD83 1088 aa14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 SART3Q15020 963 aaKnown RBP14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 PPFIBP1Q86W92 1011 aa14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 LRRC59Q96AG4 307 aaKnown RBP14.81□□□□□ -0.04
DNMT3A-202ENST00000321117 TRHP20396 242 aaPredicted RBP14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 DHX32Q7L7V1 743 aaKnown RBP14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 HAND2P61296 217 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 RRP12Q5JTH9 1297 aaKnown RBP14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 BEND3Q5T5X7 828 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 AK7Q96M32 723 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 TRIM22Q8IYM9 498 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 PI4K2BQ8TCG2 481 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 KCNG4Q8TDN1 519 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 RBM33Q96EV2 1170 aaKnown RBP14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 CALCOCO1Q9P1Z2 691 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 SHPRHQ149N8 1683 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 NR1I2O75469 434 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 FAM160A1Q05DH4 1040 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 KLHDC4Q8TBB5 520 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 MRVI1Q9Y6F6 885 aa14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 COL3A1P02461 1466 aaPredicted RBP14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 ZC3H13Q5T200 1668 aaKnown RBP14.8□□□□□ -0.04
DNMT3A-202ENST00000321117 POLR3GO15318 223 aaPredicted RBP14.79□□□□□ -0.04
DNMT3A-202ENST00000321117 NOL10Q9BSC4 688 aaKnown RBP14.79□□□□□ -0.04
DNMT3A-202ENST00000321117 PTPRMP28827 1452 aa14.79□□□□□ -0.04
DNMT3A-202ENST00000321117 VWDEQ8N2E2 1590 aa14.79□□□□□ -0.04
DNMT3A-202ENST00000321117 RAB11FIP4Q86YS3 637 aa14.79□□□□□ -0.04
DNMT3A-202ENST00000321117 DNAI1Q9UI46 699 aa14.79□□□□□ -0.04
DNMT3A-202ENST00000321117 XBP1P17861 261 aa14.79□□□□□ -0.04
DNMT3A-202ENST00000321117 SLC39A6Q13433 755 aa14.79□□□□□ -0.04
DNMT3A-202ENST00000321117 CCDC85AQ96PX6 553 aaPredicted RBP14.79□□□□□ -0.04
DNMT3A-202ENST00000321117 IGSF1Q8N6C5 1336 aa14.79□□□□□ -0.04
DNMT3A-202ENST00000321117 USP32Q8NFA0 1604 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 A0A0D9SFI3 127 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 CCDC70Q6NSX1 233 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 SMARCE1Q969G3 411 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 ERO1AQ96HE7 468 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 SUCLG2Q96I99 432 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 IFNKQ9P0W0 207 aa14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 LMOD1P29536 600 aaPredicted RBP14.78□□□□□ -0.04
DNMT3A-202ENST00000321117 CCDC129Q6ZRS4 1044 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms