RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 TTC41PQ6P2S7 1318 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 VAV2P52735 878 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 SEPT2Q15019 361 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 GORABQ5T7V8 394 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 TAX1BP1Q86VP1 789 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 DTNBP1Q96EV8 351 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 CWC25Q9NXE8 425 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 SPHKAPQ2M3C7 1700 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 HSP90AB2PQ58FF8 381 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 NUTM2DQ5VT03 806 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 AMOTL1Q8IY63 956 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 PDRG1Q9NUG6 133 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 C9orf78Q9NZ63 289 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 ABCC1P33527 1531 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 MBD5Q9P267 1494 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 FAM71BQ8TC56 605 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 CCDC51Q96ER9 411 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 PLVAPQ9BX97 442 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 SPATS2LQ9NUQ6 558 aaKnown RBP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 MSH6P52701 1360 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 BAZ2AQ9UIF9 1905 aaKnown RBP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 GRIN2AQ12879 1464 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 IQGAP3Q86VI3 1631 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 SPDYE4A6NLX3 237 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 SPA17Q15506 151 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 CCDC158Q5M9N0 1113 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 TBC1D9Q6ZT07 1266 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 SLC12A5Q9H2X9 1139 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 TTF2Q9UNY4 1162 aaKnown RBP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.17□□□□□ -1.583e-6■□□□□ 10.2
CNOT1-201ENST00000317147 PSDA5PKW4 1024 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 ARHGAP6O43182 974 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 KIF5BP33176 963 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 KRT83P78385 493 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 CCDC121Q6ZUS5 278 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 RABGGTAQ92696 567 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 JAKMIP1Q96N16 626 aaKnown RBP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 LLPHQ9BRT6 129 aaKnown RBP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 VCXQ9H320 206 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 ITGB1BP2Q9UKP3 347 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 FAM177BA6PVY3 158 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 HSF2BPO75031 334 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 PPFIA4O75335 1185 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 CASTP20810 708 aaKnown RBP5.16□□□□□ -1.58
CNOT1-201ENST00000317147 ATP5DP30049 168 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 TSNAXIP1Q2TAA8 658 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 CFAP100Q494V2 611 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 GBP7Q8N8V2 638 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-201ENST00000317147 CCHCR1Q8TD31 782 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 SPINK5Q9NQ38 1064 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-201ENST00000317147 SPTLC3Q9NUV7 552 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 RMND1Q9NWS8 449 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 CEP83Q9Y592 693 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 DISP1Q96F81 1524 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 WDR7Q9Y4E6 1490 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 PHLPP2Q6ZVD8 1323 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.16□□□□□ -1.586e-7■■■□□ 18.2
CNOT1-201ENST00000317147 ALPK2Q86TB3 2170 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 SMCHD1A6NHR9 2005 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 ARHGEF17Q96PE2 2063 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-201ENST00000317147 CCDC151A5D8V7 595 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 CCDC40Q4G0X9 1142 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 TMEM57Q8N5G2 664 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 ANKRD27Q96NW4 1050 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 DISP3Q9P2K9 1392 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 SSFA2P28290 1259 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 ZBTB17Q13105 803 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 ODF2Q5BJF6 829 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 AP1ARQ63HQ0 302 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 BRAPQ7Z569 592 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 KIF1BPQ96EK5 621 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 TSPOAP1O95153 1857 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 GIGYF1O75420 1035 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-201ENST00000317147 TRIM27P14373 513 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 PRIM1P49642 420 aaKnown RBP5.16□□□□□ -1.58
CNOT1-201ENST00000317147 BRPF1P55201 1214 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-201ENST00000317147 LRCH2Q5VUJ6 765 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 OTUD6BQ8N6M0 293 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 SSH1Q8WYL5 1049 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 TAF4BQ92750 862 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 CENPHQ9H3R5 247 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 NSD3Q9BZ95 1437 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 TTC21BQ7Z4L5 1316 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 ASXL3Q9C0F0 2248 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 RLBP1P12271 317 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 EPS15P42566 896 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 DRP2Q13474 957 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 NEDD9Q14511 834 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 TWISTNBQ3B726 338 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-201ENST00000317147 DDX46Q7L014 1031 aaKnown RBP5.16□□□□□ -1.58
CNOT1-201ENST00000317147 LMNTD2Q8IXW0 634 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 TMEM87AQ8NBN3 555 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.16□□□□□ -1.581e-6■■■■□ 19.8
CNOT1-201ENST00000317147 AFAP1L1Q8TED9 768 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 PDLIM2Q96JY6 352 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 SHROOM3Q8TF72 1996 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 KRT86O43790 486 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 CFAP58Q5T655 872 aa5.16□□□□□ -1.58
CNOT1-201ENST00000317147 ICE2Q659A1 982 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms