RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 ARFGEF2Q9Y6D5 1785 aa10.03□□□□□ -0.8
CDC42-201ENST00000315554 ABCC12Q96J65 1359 aa10.03□□□□□ -0.8
CDC42-201ENST00000315554 BCAR3O75815 825 aa10.03□□□□□ -0.8
CDC42-201ENST00000315554 NTSR2O95665 410 aa10.03□□□□□ -0.8
CDC42-201ENST00000315554 DPEP1P16444 411 aa10.03□□□□□ -0.8
CDC42-201ENST00000315554 RARSP54136 660 aaKnown RBP10.03□□□□□ -0.8
CDC42-201ENST00000315554 HSP90AB3PQ58FF7 597 aa10.03□□□□□ -0.8
CDC42-201ENST00000315554 NLRP10Q86W26 655 aa10.03□□□□□ -0.8
CDC42-201ENST00000315554 ISCA1Q9BUE6 129 aa10.03□□□□□ -0.8
CDC42-201ENST00000315554 METTL22Q9BUU2 404 aaPredicted RBP10.03□□□□□ -0.8
CDC42-201ENST00000315554 CD2APQ9Y5K6 639 aa10.03□□□□□ -0.8
CDC42-201ENST00000315554 RGL2O15211 777 aa10.02□□□□□ -0.81
CDC42-201ENST00000315554 ST5P78524 1137 aa10.02□□□□□ -0.81
CDC42-201ENST00000315554 CWF19L2Q2TBE0 894 aaKnown RBP10.02□□□□□ -0.81
CDC42-201ENST00000315554 ALDH1L2Q3SY69 923 aa10.02□□□□□ -0.81
CDC42-201ENST00000315554 SLC4A10Q6U841 1118 aa10.02□□□□□ -0.81
CDC42-201ENST00000315554 TPTE2Q6XPS3 522 aa10.02□□□□□ -0.81
CDC42-201ENST00000315554 DNAAF4Q8WXU2 420 aa10.02□□□□□ -0.81
CDC42-201ENST00000315554 UTP14AQ9BVJ6 771 aaKnown RBP10.02□□□□□ -0.81
CDC42-201ENST00000315554 PXDNLA1KZ92 1463 aa10.01□□□□□ -0.81
CDC42-201ENST00000315554 NRXN2Q9P2S2 1712 aa10.01□□□□□ -0.81
CDC42-201ENST00000315554 IGKV5-2P06315 115 aa10.01□□□□□ -0.81
CDC42-201ENST00000315554 CT47B1P0C2W7 299 aaPredicted RBP10.01□□□□□ -0.81
CDC42-201ENST00000315554 PARP10Q53GL7 1025 aa10.01□□□□□ -0.81
CDC42-201ENST00000315554 C3orf67Q6ZVT6 689 aa10.01□□□□□ -0.81
CDC42-201ENST00000315554 PPP1R42Q7Z4L9 355 aa10.01□□□□□ -0.81
CDC42-201ENST00000315554 C2CD5Q86YS7 1000 aa10.01□□□□□ -0.81
CDC42-201ENST00000315554 FAM212AQ96EL1 285 aa10.01□□□□□ -0.81
CDC42-201ENST00000315554 FAM89AQ96GI7 184 aa10.01□□□□□ -0.81
CDC42-201ENST00000315554 TRMT112Q9UI30 125 aaKnown RBP10.01□□□□□ -0.81
CDC42-201ENST00000315554 NOB1Q9ULX3 412 aaKnown RBP10.01□□□□□ -0.81
CDC42-201ENST00000315554 ANKRD36CQ5JPF3 1778 aa10.01□□□□□ -0.81
CDC42-201ENST00000315554 N4BP2Q86UW6 1770 aaPredicted RBP10□□□□□ -0.81
CDC42-201ENST00000315554 HCLS1P14317 486 aaPredicted RBP10□□□□□ -0.81
CDC42-201ENST00000315554 NEXNQ0ZGT2 675 aa10□□□□□ -0.81
CDC42-201ENST00000315554 FRAT1Q92837 279 aaPredicted RBP10□□□□□ -0.81
CDC42-201ENST00000315554 NYXQ9GZU5 481 aa10□□□□□ -0.81
CDC42-201ENST00000315554 TNNQ9UQP3 1299 aa10□□□□□ -0.81
CDC42-201ENST00000315554 TNRC6CQ9HCJ0 1690 aaKnown RBP9.99□□□□□ -0.81
CDC42-201ENST00000315554 FAM205CA6NFA0 338 aa9.99□□□□□ -0.81
CDC42-201ENST00000315554 NEURL1BA8MQ27 555 aa9.99□□□□□ -0.81
CDC42-201ENST00000315554 ANKRD31Q8N7Z5 1873 aa9.99□□□□□ -0.81
CDC42-201ENST00000315554 ZNF622Q969S3 477 aaKnown RBP eCLIP9.99□□□□□ -0.81
CDC42-201ENST00000315554 BRIP1Q9BX63 1249 aa9.99□□□□□ -0.81
CDC42-201ENST00000315554 KIAA1551Q9HCM1 1747 aa9.99□□□□□ -0.81
CDC42-201ENST00000315554 CWC25Q9NXE8 425 aaPredicted RBP9.99□□□□□ -0.81
CDC42-201ENST00000315554 KCNA3P22001 575 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 TGFB2P61812 414 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 BEND3Q5T5X7 828 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 KIF13BQ9NQT8 1826 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 SH3TC1Q8TE82 1336 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 IBTKQ9P2D0 1353 aaPredicted RBP9.98□□□□□ -0.81
CDC42-201ENST00000315554 H0YIN7 160 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 YBX3P16989 372 aaKnown RBP eCLIP9.98□□□□□ -0.812e-8■■□□□ 11.7
CDC42-201ENST00000315554 PDE6BP35913 854 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 TRIM28Q13263 835 aaKnown RBP9.98□□□□□ -0.81
CDC42-201ENST00000315554 GCKRQ14397 625 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 GPR162Q16538 588 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 PDCD7Q8N8D1 485 aaKnown RBP9.98□□□□□ -0.81
CDC42-201ENST00000315554 CCDC191Q8NCU4 936 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 LINS1Q8NG48 757 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 CLUAP1Q96AJ1 413 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 BCS1LQ9Y276 419 aa9.98□□□□□ -0.81
CDC42-201ENST00000315554 COL11A2P13942 1736 aaPredicted RBP9.97□□□□□ -0.81
CDC42-201ENST00000315554 PTPRCP08575 1304 aa9.97□□□□□ -0.81
CDC42-201ENST00000315554 IRS4O14654 1257 aaPredicted RBP9.97□□□□□ -0.81
CDC42-201ENST00000315554 UBE3BQ7Z3V4 1068 aa9.97□□□□□ -0.81
CDC42-201ENST00000315554 SLC51AQ86UW1 340 aa9.97□□□□□ -0.81
CDC42-201ENST00000315554 ZBTB38Q8NAP3 1195 aaPredicted RBP9.97□□□□□ -0.81
CDC42-201ENST00000315554 L3MBTL3Q96JM7 780 aaPredicted RBP9.97□□□□□ -0.81
CDC42-201ENST00000315554 CCDC85AQ96PX6 553 aaPredicted RBP9.97□□□□□ -0.81
CDC42-201ENST00000315554 SRCIN1Q9C0H9 1055 aa9.97□□□□□ -0.81
CDC42-201ENST00000315554 CACNA1FO60840 1977 aa9.96□□□□□ -0.81
CDC42-201ENST00000315554 PCCAP05165 728 aaPredicted RBP9.96□□□□□ -0.82
CDC42-201ENST00000315554 SRGNP10124 158 aa9.96□□□□□ -0.82
CDC42-201ENST00000315554 TMEM132AQ24JP5 1023 aa9.96□□□□□ -0.82
CDC42-201ENST00000315554 SLC10A5Q5PT55 438 aa9.96□□□□□ -0.82
CDC42-201ENST00000315554 NLRP3Q96P20 1036 aa9.96□□□□□ -0.82
CDC42-201ENST00000315554 API5Q9BZZ5 524 aaKnown RBP9.96□□□□□ -0.82
CDC42-201ENST00000315554 PIM2Q9P1W9 311 aa9.96□□□□□ -0.82
CDC42-201ENST00000315554 RCAN3Q9UKA8 241 aa9.96□□□□□ -0.82
CDC42-201ENST00000315554 KIF16BQ96L93 1317 aa9.96□□□□□ -0.82
CDC42-201ENST00000315554 H7C1W4 665 aa9.95□□□□□ -0.82
CDC42-201ENST00000315554 PLIN1O60240 522 aa9.95□□□□□ -0.82
CDC42-201ENST00000315554 TRIM27P14373 513 aa9.95□□□□□ -0.82
CDC42-201ENST00000315554 BRPF1P55201 1214 aaPredicted RBP9.95□□□□□ -0.82
CDC42-201ENST00000315554 DALRD3Q5D0E6 543 aaKnown RBP9.95□□□□□ -0.82
CDC42-201ENST00000315554 RPGRQ92834 1020 aaKnown RBP9.95□□□□□ -0.82
CDC42-201ENST00000315554 MASTLQ96GX5 879 aa9.95□□□□□ -0.82
CDC42-201ENST00000315554 FBXO3Q9UK99 471 aa9.95□□□□□ -0.82
CDC42-201ENST00000315554 RNF123Q5XPI4 1314 aa9.95□□□□□ -0.82
CDC42-201ENST00000315554 DDX60Q8IY21 1712 aaKnown RBP9.94□□□□□ -0.82
CDC42-201ENST00000315554 KLRG2A4D1S0 409 aaPredicted RBP9.94□□□□□ -0.82
CDC42-201ENST00000315554 NPR1P16066 1061 aa9.94□□□□□ -0.82
CDC42-201ENST00000315554 ZKSCAN2Q63HK3 967 aa9.94□□□□□ -0.82
CDC42-201ENST00000315554 OLFM4Q6UX06 510 aa9.94□□□□□ -0.82
CDC42-201ENST00000315554 ATF7IPQ6VMQ6 1270 aa9.94□□□□□ -0.82
CDC42-201ENST00000315554 TTLL6Q8N841 843 aa9.94□□□□□ -0.82
CDC42-201ENST00000315554 C9orf78Q9NZ63 289 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms