RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 NEK1Q96PY6 1258 aa15.64■□□□□ 0.09
RFFL-201ENST00000315249 BEGAINQ9BUH8 593 aa15.64■□□□□ 0.09
RFFL-201ENST00000315249 CCDC87Q9NVE4 849 aa15.64■□□□□ 0.09
RFFL-201ENST00000315249 TNNT3P45378 269 aaPredicted RBP15.64■□□□□ 0.09
RFFL-201ENST00000315249 CDR1P51861 262 aa15.64■□□□□ 0.09
RFFL-201ENST00000315249 ALDH1L1O75891 902 aa15.64■□□□□ 0.09
RFFL-201ENST00000315249 PHAXQ9H814 394 aaKnown RBP15.64■□□□□ 0.09
RFFL-201ENST00000315249 BCS1LQ9Y276 419 aa15.64■□□□□ 0.09
RFFL-201ENST00000315249 SYCP3Q8IZU3 236 aa15.63■□□□□ 0.09
RFFL-201ENST00000315249 CALML4Q96GE6 196 aa15.63■□□□□ 0.09
RFFL-201ENST00000315249 LRRC2Q9BYS8 371 aa15.63■□□□□ 0.09
RFFL-201ENST00000315249 ESR2Q92731 530 aa15.63■□□□□ 0.09
RFFL-201ENST00000315249 TCP11L1Q9NUJ3 509 aa15.63■□□□□ 0.09
RFFL-201ENST00000315249 MCM5P33992 734 aa15.63■□□□□ 0.09
RFFL-201ENST00000315249 TTC16Q8NEE8 873 aa15.63■□□□□ 0.09
RFFL-201ENST00000315249 BICC1Q9H694 974 aaKnown RBP15.63■□□□□ 0.09
RFFL-201ENST00000315249 LINS1Q8NG48 757 aa15.63■□□□□ 0.09
RFFL-201ENST00000315249 SAP30BPQ9UHR5 308 aaKnown RBP15.63■□□□□ 0.09
RFFL-201ENST00000315249 RAB3GAP1Q15042 981 aa15.63■□□□□ 0.09
RFFL-201ENST00000315249 ENOX2Q16206 610 aaKnown RBP15.63■□□□□ 0.09
RFFL-201ENST00000315249 BACH2Q9BYV9 841 aa15.63■□□□□ 0.09
RFFL-201ENST00000315249 DPP8Q6V1X1 898 aaPredicted RBP15.63■□□□□ 0.09
RFFL-201ENST00000315249 ZFYP08048 801 aaPredicted RBP15.62■□□□□ 0.09
RFFL-201ENST00000315249 KRT23Q9C075 422 aa15.62■□□□□ 0.09
RFFL-201ENST00000315249 SH2B1Q9NRF2 756 aaPredicted RBP15.62■□□□□ 0.09
RFFL-201ENST00000315249 RXRBP28702 533 aa15.62■□□□□ 0.09
RFFL-201ENST00000315249 BICD1Q96G01 975 aa15.62■□□□□ 0.09
RFFL-201ENST00000315249 HMGN5P82970 282 aaKnown RBP15.62■□□□□ 0.09
RFFL-201ENST00000315249 PAG1Q9NWQ8 432 aa15.62■□□□□ 0.09
RFFL-201ENST00000315249 PICK1Q9NRD5 415 aa15.62■□□□□ 0.09
RFFL-201ENST00000315249 IDEP14735 1019 aa15.62■□□□□ 0.09
RFFL-201ENST00000315249 PLCG2P16885 1265 aa15.62■□□□□ 0.09
RFFL-201ENST00000315249 CARD14Q9BXL6 1004 aa15.61■□□□□ 0.09
RFFL-201ENST00000315249 LGR6Q9HBX8 967 aa15.61■□□□□ 0.09
RFFL-201ENST00000315249 GGA1Q9UJY5 639 aa15.61■□□□□ 0.09
RFFL-201ENST00000315249 LIMCH1Q9UPQ0 1083 aa15.61■□□□□ 0.09
RFFL-201ENST00000315249 PANK2Q9BZ23 570 aa15.61■□□□□ 0.09
RFFL-201ENST00000315249 ORC3Q9UBD5 711 aaPredicted RBP15.61■□□□□ 0.09
RFFL-201ENST00000315249 CBFA2T2O43439 604 aa15.61■□□□□ 0.09
RFFL-201ENST00000315249 COL17A1Q9UMD9 1497 aaPredicted RBP15.61■□□□□ 0.09
RFFL-201ENST00000315249 TFCP2Q12800 502 aa15.61■□□□□ 0.09
RFFL-201ENST00000315249 TRIM37O94972 964 aa15.6■□□□□ 0.09
RFFL-201ENST00000315249 TSPYL6Q8N831 410 aa15.6■□□□□ 0.09
RFFL-201ENST00000315249 ZNF397Q8NF99 534 aaPredicted RBP15.6■□□□□ 0.09
RFFL-201ENST00000315249 SBNO2Q9Y2G9 1366 aa15.6■□□□□ 0.09
RFFL-201ENST00000315249 VSIG10Q8N0Z9 540 aa15.6■□□□□ 0.09
RFFL-201ENST00000315249 TMEM2Q9UHN6 1383 aa15.6■□□□□ 0.09
RFFL-201ENST00000315249 ITGA6P23229 1130 aa15.6■□□□□ 0.09
RFFL-201ENST00000315249 MAP3K9P80192 1104 aa15.6■□□□□ 0.09
RFFL-201ENST00000315249 MRPL50Q8N5N7 158 aaKnown RBP15.6■□□□□ 0.09
RFFL-201ENST00000315249 MCMDC2Q4G0Z9 681 aa15.6■□□□□ 0.09
RFFL-201ENST00000315249 PPP4R3BQ5MIZ7 849 aa15.6■□□□□ 0.09
RFFL-201ENST00000315249 ARGLU1Q9NWB6 273 aaPredicted RBP15.6■□□□□ 0.09
RFFL-201ENST00000315249 CFAP100Q494V2 611 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 KIAA1328Q86T90 577 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 ARHGAP27Q6ZUM4 889 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 TRPC5Q9UL62 973 aaPredicted RBP15.59■□□□□ 0.09
RFFL-201ENST00000315249 DNMT1P26358 1616 aaKnown RBP15.59■□□□□ 0.09
RFFL-201ENST00000315249 KLF18A0A0U1RQI7 1052 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 UBA7P41226 1012 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 CNNM3Q8NE01 707 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 SMARCC2Q8TAQ2 1214 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 YEATS2Q9ULM3 1422 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 ZBTB43O43298 467 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 DNAJC10Q8IXB1 793 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 SLC52A2Q9HAB3 445 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 SH3TC1Q8TE82 1336 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 FAM182BQ5T319 152 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 CACNA2D4Q7Z3S7 1137 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 TCERG1LQ5VWI1 586 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 TBC1D9Q6ZT07 1266 aa15.59■□□□□ 0.09
RFFL-201ENST00000315249 SMTNL1A8MU46 457 aa15.58■□□□□ 0.09
RFFL-201ENST00000315249 ERLIN2O94905 339 aa15.58■□□□□ 0.09
RFFL-201ENST00000315249 CALM1P0DP23 149 aa15.58■□□□□ 0.09
RFFL-201ENST00000315249 CALM2P0DP24 149 aa15.58■□□□□ 0.09
RFFL-201ENST00000315249 CALM3P0DP25 149 aa15.58■□□□□ 0.09
RFFL-201ENST00000315249 TXLNBQ8N3L3 684 aa15.58■□□□□ 0.09
RFFL-201ENST00000315249 PARP10Q53GL7 1025 aa15.58■□□□□ 0.09
RFFL-201ENST00000315249 ACBD3Q9H3P7 528 aa15.58■□□□□ 0.09
RFFL-201ENST00000315249 SP4Q02446 784 aa15.58■□□□□ 0.08
RFFL-201ENST00000315249 RTN1Q16799 776 aa15.58■□□□□ 0.08
RFFL-201ENST00000315249 DDX21Q9NR30 783 aaKnown RBP eCLIP15.58■□□□□ 0.08
RFFL-201ENST00000315249 HSP90B2PQ58FF3 399 aa15.58■□□□□ 0.08
RFFL-201ENST00000315249 CNNM2Q9H8M5 875 aa15.58■□□□□ 0.08
RFFL-201ENST00000315249 PDIA4P13667 645 aaKnown RBP15.58■□□□□ 0.08
RFFL-201ENST00000315249 CCDC97Q96F63 343 aaPredicted RBP15.58■□□□□ 0.08
RFFL-201ENST00000315249 CCP110O43303 1012 aa15.58■□□□□ 0.08
RFFL-201ENST00000315249 FILIP1Q7Z7B0 1213 aa15.58■□□□□ 0.08
RFFL-201ENST00000315249 TFIP11Q9UBB9 837 aaKnown RBP15.58■□□□□ 0.08
RFFL-201ENST00000315249 SBNO1A3KN83 1393 aa15.58■□□□□ 0.08
RFFL-201ENST00000315249 ZFYVE9O95405 1425 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 NEO1Q92859 1461 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 NAPAP54920 295 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 CCDC178Q5BJE1 867 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 ZNF772Q68DY9 489 aaPredicted RBP15.57■□□□□ 0.08
RFFL-201ENST00000315249 MMRN2Q9H8L6 949 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 MRE11P49959 708 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 NIM1KQ8IY84 436 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 TEX11Q8IYF3 940 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 PLCD3Q8N3E9 789 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms