RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 ATP8B2P98198 1209 aa28■■■□□ 2.07
CCDC85B-201ENST00000312579 B4GALNT3Q6L9W6 998 aa28■■■□□ 2.07
CCDC85B-201ENST00000312579 MYH3P11055 1940 aa28■■■□□ 2.07
CCDC85B-201ENST00000312579 C10orf71Q711Q0 1435 aa27.99■■■□□ 2.07
CCDC85B-201ENST00000312579 HSP90B1P14625 803 aaKnown RBP27.99■■■□□ 2.07
CCDC85B-201ENST00000312579 AAMPQ13685 434 aa27.99■■■□□ 2.07
CCDC85B-201ENST00000312579 CCDC136Q96JN2 1154 aa27.99■■■□□ 2.07
CCDC85B-201ENST00000312579 SRGAP3O43295 1099 aa27.98■■■□□ 2.07
CCDC85B-201ENST00000312579 SF3B3Q15393 1217 aaKnown RBP27.98■■■□□ 2.07
CCDC85B-201ENST00000312579 RIC1Q4ADV7 1423 aa27.98■■■□□ 2.07
CCDC85B-201ENST00000312579 KLHL34Q8N239 644 aa27.97■■■□□ 2.07
CCDC85B-201ENST00000312579 SEC31BQ9NQW1 1179 aa27.97■■■□□ 2.07
CCDC85B-201ENST00000312579 PPP1R1BQ9UD71 204 aaPredicted RBP27.97■■■□□ 2.07
CCDC85B-201ENST00000312579 MTX1Q13505 466 aa27.97■■■□□ 2.07
CCDC85B-201ENST00000312579 CCDC152Q4G0S7 254 aa27.97■■■□□ 2.07
CCDC85B-201ENST00000312579 RPAP2Q8IXW5 612 aaPredicted RBP27.97■■■□□ 2.07
CCDC85B-201ENST00000312579 KLHDC4Q8TBB5 520 aa27.96■■■□□ 2.07
CCDC85B-201ENST00000312579 COL4A1P02462 1669 aa27.95■■■□□ 2.07
CCDC85B-201ENST00000312579 KLRG2A4D1S0 409 aaPredicted RBP27.95■■■□□ 2.06
CCDC85B-201ENST00000312579 ITGA6P23229 1130 aa27.95■■■□□ 2.06
CCDC85B-201ENST00000312579 CHRNA5P30532 468 aa27.95■■■□□ 2.06
CCDC85B-201ENST00000312579 PDE6BP35913 854 aa27.95■■■□□ 2.06
CCDC85B-201ENST00000312579 ZNF594Q96JF6 807 aaPredicted RBP27.95■■■□□ 2.06
CCDC85B-201ENST00000312579 CRY2Q49AN0 593 aa27.94■■■□□ 2.06
CCDC85B-201ENST00000312579 PA2G4Q9UQ80 394 aaKnown RBP27.94■■■□□ 2.06
CCDC85B-201ENST00000312579 RFX5P48382 616 aaPredicted RBP27.93■■■□□ 2.06
CCDC85B-201ENST00000312579 POLA2Q14181 598 aa27.93■■■□□ 2.06
CCDC85B-201ENST00000312579 C2CD5Q86YS7 1000 aa27.93■■■□□ 2.06
CCDC85B-201ENST00000312579 SSH3Q8TE77 659 aa27.93■■■□□ 2.06
CCDC85B-201ENST00000312579 TAF1P21675 1872 aa27.93■■■□□ 2.06
CCDC85B-201ENST00000312579 COL11A2P13942 1736 aaPredicted RBP27.93■■■□□ 2.06
CCDC85B-201ENST00000312579 IFIT5Q13325 482 aaKnown RBP27.92■■■□□ 2.06
CCDC85B-201ENST00000312579 CCDC57Q2TAC2 916 aa27.92■■■□□ 2.06
CCDC85B-201ENST00000312579 RPGRQ92834 1020 aaKnown RBP27.92■■■□□ 2.06
CCDC85B-201ENST00000312579 SRCAPQ6ZRS2 3230 aa27.92■■■□□ 2.06
CCDC85B-201ENST00000312579 IGHDP01880 384 aa27.92■■■□□ 2.06
CCDC85B-201ENST00000312579 SRGNP10124 158 aa27.92■■■□□ 2.06
CCDC85B-201ENST00000312579 ANKRD18BA2A2Z9 1011 aa27.91■■■□□ 2.06
CCDC85B-201ENST00000312579 A0A0G2JLW4 131 aa27.9■■■□□ 2.06
CCDC85B-201ENST00000312579 DDX46Q7L014 1031 aaKnown RBP27.9■■■□□ 2.06
CCDC85B-201ENST00000312579 CELF1Q92879 486 aaKnown RBP27.9■■■□□ 2.06
CCDC85B-201ENST00000312579 KIF13BQ9NQT8 1826 aa27.9■■■□□ 2.06
CCDC85B-201ENST00000312579 RTL9Q8NET4 1388 aa27.89■■■□□ 2.06
CCDC85B-201ENST00000312579 H0YIN7 160 aa27.89■■■□□ 2.06
CCDC85B-201ENST00000312579 PTPN12Q05209 780 aaKnown RBP27.89■■■□□ 2.06
CCDC85B-201ENST00000312579 SIL1Q9H173 461 aa27.89■■■□□ 2.06
CCDC85B-201ENST00000312579 DPEP1P16444 411 aa27.88■■■□□ 2.05
CCDC85B-201ENST00000312579 SLC51AQ86UW1 340 aa27.88■■■□□ 2.05
CCDC85B-201ENST00000312579 ZNF622Q969S3 477 aaKnown RBP eCLIP27.88■■■□□ 2.05
CCDC85B-201ENST00000312579 HMMRO75330 724 aa27.87■■■□□ 2.05
CCDC85B-201ENST00000312579 NPR1P16066 1061 aa27.87■■■□□ 2.05
CCDC85B-201ENST00000312579 TAF7LQ5H9L4 462 aa27.87■■■□□ 2.05
CCDC85B-201ENST00000312579 RBM17Q96I25 401 aaKnown RBP27.87■■■□□ 2.05
CCDC85B-201ENST00000312579 PUS3Q9BZE2 481 aaKnown RBP27.87■■■□□ 2.05
CCDC85B-201ENST00000312579 HOXA10P31260 410 aaPredicted RBP27.87■■■□□ 2.05
CCDC85B-201ENST00000312579 HDAC1Q13547 482 aaPredicted RBP27.87■■■□□ 2.05
CCDC85B-201ENST00000312579 MASTLQ96GX5 879 aa27.86■■■□□ 2.05
CCDC85B-201ENST00000312579 WWC3Q9ULE0 1092 aa27.86■■■□□ 2.05
CCDC85B-201ENST00000312579 EXOC6BQ9Y2D4 811 aa27.86■■■□□ 2.05
CCDC85B-201ENST00000312579 CD2APQ9Y5K6 639 aa27.86■■■□□ 2.05
CCDC85B-201ENST00000312579 SURF6O75683 361 aaKnown RBP27.85■■■□□ 2.05
CCDC85B-201ENST00000312579 KCNA3P22001 575 aa27.85■■■□□ 2.05
CCDC85B-201ENST00000312579 GRAPQ13588 217 aa27.85■■■□□ 2.05
CCDC85B-201ENST00000312579 NLGN2Q8NFZ4 835 aa27.85■■■□□ 2.05
CCDC85B-201ENST00000312579 GRAPLQ8TC17 118 aaPredicted RBP27.85■■■□□ 2.05
CCDC85B-201ENST00000312579 RWDD1Q9H446 243 aaPredicted RBP27.85■■■□□ 2.05
CCDC85B-201ENST00000312579 LRRC24Q50LG9 513 aa27.84■■■□□ 2.05
CCDC85B-201ENST00000312579 ANKRD18AQ8IVF6 992 aa27.84■■■□□ 2.05
CCDC85B-201ENST00000312579 CDC5LQ99459 802 aaKnown RBP27.84■■■□□ 2.05
CCDC85B-201ENST00000312579 FHDC1Q9C0D6 1143 aaPredicted RBP27.84■■■□□ 2.05
CCDC85B-201ENST00000312579 COPRSQ9NQ92 184 aa27.84■■■□□ 2.05
CCDC85B-201ENST00000312579 KIAA1551Q9HCM1 1747 aa27.84■■■□□ 2.05
CCDC85B-201ENST00000312579 SPEF2Q9C093 1822 aa27.84■■■□□ 2.05
CCDC85B-201ENST00000312579 RPS8P62241 208 aaKnown RBP27.83■■■□□ 2.05
CCDC85B-201ENST00000312579 PELP1Q8IZL8 1130 aaKnown RBP27.83■■■□□ 2.05
CCDC85B-201ENST00000312579 CRAMP1Q96RY5 1269 aa27.83■■■□□ 2.05
CCDC85B-201ENST00000312579 APBB1O00213 710 aa27.82■■■□□ 2.04
CCDC85B-201ENST00000312579 TGFB2P61812 414 aa27.82■■■□□ 2.04
CCDC85B-201ENST00000312579 STYK1Q6J9G0 422 aa27.82■■■□□ 2.04
CCDC85B-201ENST00000312579 IGHMBP2P38935 993 aaKnown RBP27.82■■■□□ 2.04
CCDC85B-201ENST00000312579 LDHAL6AQ6ZMR3 332 aa27.82■■■□□ 2.04
CCDC85B-201ENST00000312579 MPHOSPH8Q99549 860 aa27.81■■■□□ 2.04
CCDC85B-201ENST00000312579 DCTPP1Q9H773 170 aa27.81■■■□□ 2.04
CCDC85B-201ENST00000312579 PDZRN3Q9UPQ7 1066 aa27.81■■■□□ 2.04
CCDC85B-201ENST00000312579 ATG9AQ7Z3C6 839 aa27.8■■■□□ 2.04
CCDC85B-201ENST00000312579 CNNM1Q9NRU3 951 aa27.8■■■□□ 2.04
CCDC85B-201ENST00000312579 NOP58Q9Y2X3 529 aaKnown RBP27.8■■■□□ 2.04
CCDC85B-201ENST00000312579 EYA2O00167 538 aa27.79■■■□□ 2.04
CCDC85B-201ENST00000312579 CACNA1SQ13698 1873 aa27.79■■■□□ 2.04
CCDC85B-201ENST00000312579 ALDH1B1P30837 517 aa27.78■■■□□ 2.04
CCDC85B-201ENST00000312579 G3BP1Q13283 466 aaKnown RBP eCLIP27.78■■■□□ 2.04
CCDC85B-201ENST00000312579 OS9Q13438 667 aaPredicted RBP27.78■■■□□ 2.04
CCDC85B-201ENST00000312579 OLFM4Q6UX06 510 aa27.78■■■□□ 2.04
CCDC85B-201ENST00000312579 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.78■■■□□ 2.04
CCDC85B-201ENST00000312579 DLEC1Q9Y238 1755 aa27.78■■■□□ 2.04
CCDC85B-201ENST00000312579 LRP5O75197 1615 aa27.78■■■□□ 2.04
CCDC85B-201ENST00000312579 PRPF40BQ6NWY9 871 aaKnown RBP27.77■■■□□ 2.04
CCDC85B-201ENST00000312579 BCL11AQ9H165 835 aa27.77■■■□□ 2.04
CCDC85B-201ENST00000312579 BSDC1Q9NW68 430 aaPredicted RBP27.77■■■□□ 2.04
CCDC85B-201ENST00000312579 ZNF219Q9P2Y4 722 aaPredicted RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms