RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
CHMP2A-201ENST00000312547 RTL9Q8NET4 1388 aa15.86■□□□□ 0.13
CHMP2A-201ENST00000312547 SRGNP10124 158 aa15.85■□□□□ 0.13
CHMP2A-201ENST00000312547 HOXA10P31260 410 aaPredicted RBP15.85■□□□□ 0.13
CHMP2A-201ENST00000312547 AAMPQ13685 434 aa15.85■□□□□ 0.13
CHMP2A-201ENST00000312547 LMBR1LQ6UX01 489 aa15.85■□□□□ 0.13
CHMP2A-201ENST00000312547 GOLGB1Q14789 3259 aaKnown RBP15.85■□□□□ 0.13
CHMP2A-201ENST00000312547 ANKRD31Q8N7Z5 1873 aa15.84■□□□□ 0.13
CHMP2A-201ENST00000312547 TGFB2P61812 414 aa15.84■□□□□ 0.13
CHMP2A-201ENST00000312547 CCDC152Q4G0S7 254 aa15.84■□□□□ 0.13
CHMP2A-201ENST00000312547 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
CHMP2A-201ENST00000312547 FAM161AQ3B820 660 aa15.83■□□□□ 0.12
CHMP2A-201ENST00000312547 CEP85Q6P2H3 762 aa15.83■□□□□ 0.12
CHMP2A-201ENST00000312547 C2CD5Q86YS7 1000 aa15.83■□□□□ 0.12
CHMP2A-201ENST00000312547 GREM2Q9H772 168 aa15.83■□□□□ 0.12
CHMP2A-201ENST00000312547 NPR1P16066 1061 aa15.82■□□□□ 0.12
CHMP2A-201ENST00000312547 KCNA3P22001 575 aa15.82■□□□□ 0.12
CHMP2A-201ENST00000312547 CHRNA5P30532 468 aa15.82■□□□□ 0.12
CHMP2A-201ENST00000312547 ATP8B2P98198 1209 aa15.82■□□□□ 0.12
CHMP2A-201ENST00000312547 STYK1Q6J9G0 422 aa15.82■□□□□ 0.12
CHMP2A-201ENST00000312547 CCDC85AQ96PX6 553 aaPredicted RBP15.82■□□□□ 0.12
CHMP2A-201ENST00000312547 PPP1R1BQ9UD71 204 aaPredicted RBP15.82■□□□□ 0.12
CHMP2A-201ENST00000312547 PCDHB15Q9Y5E8 787 aa15.82■□□□□ 0.12
CHMP2A-201ENST00000312547 H0YIN7 160 aa15.81■□□□□ 0.12
CHMP2A-201ENST00000312547 DPEP1P16444 411 aa15.81■□□□□ 0.12
CHMP2A-201ENST00000312547 RFX5P48382 616 aaPredicted RBP15.81■□□□□ 0.12
CHMP2A-201ENST00000312547 SIRT2Q8IXJ6 389 aa15.81■□□□□ 0.12
CHMP2A-201ENST00000312547 RPAP2Q8IXW5 612 aaPredicted RBP15.81■□□□□ 0.12
CHMP2A-201ENST00000312547 MASTLQ96GX5 879 aa15.81■□□□□ 0.12
CHMP2A-201ENST00000312547 CRAMP1Q96RY5 1269 aa15.81■□□□□ 0.12
CHMP2A-201ENST00000312547 FHDC1Q9C0D6 1143 aaPredicted RBP15.81■□□□□ 0.12
CHMP2A-201ENST00000312547 KIAA1551Q9HCM1 1747 aa15.81■□□□□ 0.12
CHMP2A-201ENST00000312547 SEC31BQ9NQW1 1179 aa15.81■□□□□ 0.12
CHMP2A-201ENST00000312547 PNMA6EA0A0J9YXQ4 647 aa15.8■□□□□ 0.12
CHMP2A-201ENST00000312547 NEFLP07196 543 aa15.8■□□□□ 0.12
CHMP2A-201ENST00000312547 ITGA6P23229 1130 aa15.8■□□□□ 0.12
CHMP2A-201ENST00000312547 POLA2Q14181 598 aa15.8■□□□□ 0.12
CHMP2A-201ENST00000312547 SSH3Q8TE77 659 aa15.8■□□□□ 0.12
CHMP2A-201ENST00000312547 RPGRQ92834 1020 aaKnown RBP15.8■□□□□ 0.12
CHMP2A-201ENST00000312547 RBM17Q96I25 401 aaKnown RBP15.8■□□□□ 0.12
CHMP2A-201ENST00000312547 COL11A2P13942 1736 aaPredicted RBP15.8■□□□□ 0.12
CHMP2A-201ENST00000312547 A0A0G2JLW4 131 aa15.79■□□□□ 0.12
CHMP2A-201ENST00000312547 SRGAP3O43295 1099 aa15.79■□□□□ 0.12
CHMP2A-201ENST00000312547 IFIT5Q13325 482 aaKnown RBP15.79■□□□□ 0.12
CHMP2A-201ENST00000312547 DDX46Q7L014 1031 aaKnown RBP15.79■□□□□ 0.12
CHMP2A-201ENST00000312547 NLGN2Q8NFZ4 835 aa15.79■□□□□ 0.12
CHMP2A-201ENST00000312547 CELF1Q92879 486 aaKnown RBP15.79■□□□□ 0.12
CHMP2A-201ENST00000312547 SYT17Q9BSW7 474 aa15.79■□□□□ 0.12
CHMP2A-201ENST00000312547 CHMP3Q9Y3E7 222 aa15.79■□□□□ 0.12
CHMP2A-201ENST00000312547 ANKRD18BA2A2Z9 1011 aa15.78■□□□□ 0.12
CHMP2A-201ENST00000312547 ALDH1B1P30837 517 aa15.78■□□□□ 0.12
CHMP2A-201ENST00000312547 GRAPQ13588 217 aa15.78■□□□□ 0.12
CHMP2A-201ENST00000312547 CCDC57Q2TAC2 916 aa15.78■□□□□ 0.12
CHMP2A-201ENST00000312547 KLHL34Q8N239 644 aa15.78■□□□□ 0.12
CHMP2A-201ENST00000312547 GRAPLQ8TC17 118 aaPredicted RBP15.78■□□□□ 0.12
CHMP2A-201ENST00000312547 CDC5LQ99459 802 aaKnown RBP15.78■□□□□ 0.12
CHMP2A-201ENST00000312547 COL4A1P02462 1669 aa15.78■□□□□ 0.12
CHMP2A-201ENST00000312547 RPS8P62241 208 aaKnown RBP15.77■□□□□ 0.12
CHMP2A-201ENST00000312547 PTPN12Q05209 780 aaKnown RBP15.77■□□□□ 0.12
CHMP2A-201ENST00000312547 ERICH6BQ5W0A0 696 aa15.77■□□□□ 0.12
CHMP2A-201ENST00000312547 CNKSR1Q969H4 720 aa15.77■□□□□ 0.12
CHMP2A-201ENST00000312547 COPRSQ9NQ92 184 aa15.77■□□□□ 0.12
CHMP2A-201ENST00000312547 MYH3P11055 1940 aa15.76■□□□□ 0.11
CHMP2A-201ENST00000312547 BBOX1O75936 387 aa15.76■□□□□ 0.11
CHMP2A-201ENST00000312547 ZNF622Q969S3 477 aaKnown RBP eCLIP15.76■□□□□ 0.114e-8■■□□□ 11.4
CHMP2A-201ENST00000312547 ZNF594Q96JF6 807 aaPredicted RBP15.76■□□□□ 0.11
CHMP2A-201ENST00000312547 PRPF40BQ6NWY9 871 aaKnown RBP15.75■□□□□ 0.11
CHMP2A-201ENST00000312547 ANKRD18AQ8IVF6 992 aa15.75■□□□□ 0.11
CHMP2A-201ENST00000312547 TTLL6Q8N841 843 aa15.75■□□□□ 0.11
CHMP2A-201ENST00000312547 KLHDC4Q8TBB5 520 aa15.75■□□□□ 0.11
CHMP2A-201ENST00000312547 PIM2Q9P1W9 311 aa15.75■□□□□ 0.11
CHMP2A-201ENST00000312547 NOP58Q9Y2X3 529 aaKnown RBP15.75■□□□□ 0.11
CHMP2A-201ENST00000312547 DLEC1Q9Y238 1755 aa15.75■□□□□ 0.11
CHMP2A-201ENST00000312547 HMMRO75330 724 aa15.74■□□□□ 0.11
CHMP2A-201ENST00000312547 IGHMBP2P38935 993 aaKnown RBP15.74■□□□□ 0.11
CHMP2A-201ENST00000312547 HDAC1Q13547 482 aaPredicted RBP15.74■□□□□ 0.11
CHMP2A-201ENST00000312547 TMC4Q7Z404 712 aa15.74■□□□□ 0.11
CHMP2A-201ENST00000312547 C7orf43Q8WVR3 580 aa15.74■□□□□ 0.11
CHMP2A-201ENST00000312547 BSDC1Q9NW68 430 aaPredicted RBP15.74■□□□□ 0.11
CHMP2A-201ENST00000312547 FBXO3Q9UK99 471 aa15.74■□□□□ 0.11
CHMP2A-201ENST00000312547 PA2G4Q9UQ80 394 aaKnown RBP15.74■□□□□ 0.11
CHMP2A-201ENST00000312547 PPEF1O14829 653 aaPredicted RBP15.73■□□□□ 0.11
CHMP2A-201ENST00000312547 CIAO1O76071 339 aa15.73■□□□□ 0.11
CHMP2A-201ENST00000312547 TAF7LQ5H9L4 462 aa15.73■□□□□ 0.11
CHMP2A-201ENST00000312547 PUS3Q9BZE2 481 aaKnown RBP15.73■□□□□ 0.11
CHMP2A-201ENST00000312547 ATP6V0A2Q9Y487 856 aa15.73■□□□□ 0.11
CHMP2A-201ENST00000312547 RIPOR2Q9Y4F9 1068 aa15.73■□□□□ 0.11
CHMP2A-201ENST00000312547 EYA2O00167 538 aa15.72■□□□□ 0.11
CHMP2A-201ENST00000312547 DALRD3Q5D0E6 543 aaKnown RBP15.72■□□□□ 0.11
CHMP2A-201ENST00000312547 LDHAL6AQ6ZMR3 332 aa15.72■□□□□ 0.11
CHMP2A-201ENST00000312547 ATG9AQ7Z3C6 839 aa15.72■□□□□ 0.11
CHMP2A-201ENST00000312547 SLC51AQ86UW1 340 aa15.72■□□□□ 0.11
CHMP2A-201ENST00000312547 SP8Q8IXZ3 490 aa15.72■□□□□ 0.11
CHMP2A-201ENST00000312547 MPHOSPH8Q99549 860 aa15.72■□□□□ 0.11
CHMP2A-201ENST00000312547 LRRC24Q50LG9 513 aa15.71■□□□□ 0.11
CHMP2A-201ENST00000312547 DCTPP1Q9H773 170 aa15.71■□□□□ 0.11
CHMP2A-201ENST00000312547 MINPP1Q9UNW1 487 aa15.71■□□□□ 0.11
CHMP2A-201ENST00000312547 SNED1Q8TER0 1413 aa15.7■□□□□ 0.1
CHMP2A-201ENST00000312547 SURF6O75683 361 aaKnown RBP15.7■□□□□ 0.1
CHMP2A-201ENST00000312547 IGHDP01880 384 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms