RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 NUTM2EB1AL46 878 aaPredicted RBP14.92□□□□□ -0.02
RETREG3-201ENST00000309428 POLR3GO15318 223 aaPredicted RBP14.92□□□□□ -0.02
RETREG3-201ENST00000309428 SASH1O94885 1247 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 RXRAP19793 462 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 SLC4A8Q2Y0W8 1093 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 CCDC73Q6ZRK6 1079 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 NUTM2AQ8IVF1 878 aaPredicted RBP14.92□□□□□ -0.02
RETREG3-201ENST00000309428 SYNE4Q8N205 404 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 LINS1Q8NG48 757 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 MTMR7Q9Y216 660 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 OTUD7BQ6GQQ9 843 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 ISM2Q6H9L7 571 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 ARHGEF25Q86VW2 580 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 ADAMTS2O95450 1211 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 CREB3L3Q68CJ9 461 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 TTLL5Q6EMB2 1281 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 LETM1O95202 739 aaPredicted RBP14.91□□□□□ -0.02
RETREG3-201ENST00000309428 HS1BP3Q53T59 392 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 IFNL2Q8IZJ0 200 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 MNS1Q8NEH6 495 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 BCL2L12Q9HB09 334 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 ME3Q16798 604 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 RRP12Q5JTH9 1297 aaKnown RBP14.91□□□□□ -0.02
RETREG3-201ENST00000309428 SIRT1Q96EB6 747 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 PRIMPOLQ96LW4 560 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 CLIP2Q9UDT6 1046 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 RNF20Q5VTR2 975 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 ZNF500O60304 480 aaPredicted RBP14.9□□□□□ -0.02
RETREG3-201ENST00000309428 PI16Q6UXB8 463 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 CHMP4AQ9BY43 222 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 DDX21Q9NR30 783 aaKnown RBP eCLIP14.9□□□□□ -0.02
RETREG3-201ENST00000309428 GOLGB1Q14789 3259 aaKnown RBP14.9□□□□□ -0.02
RETREG3-201ENST00000309428 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 IGKV5-2P06315 115 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 DIP2BQ9P265 1576 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 SNAP23O00161 211 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 HSPA4P34932 840 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 LRMPQ12912 555 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 CDC37L1Q7L3B6 337 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 MYRIPQ8NFW9 859 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 DACT1Q9NYF0 836 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 IDH1O75874 414 aaKnown RBP14.89□□□□□ -0.03
RETREG3-201ENST00000309428 ZSCAN22P10073 491 aaPredicted RBP14.89□□□□□ -0.03
RETREG3-201ENST00000309428 ME1P48163 572 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 UBE2HP62256 183 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 SMAP1Q8IYB5 467 aaPredicted RBP14.89□□□□□ -0.03
RETREG3-201ENST00000309428 PDILTQ8N807 584 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 PUS3Q9BZE2 481 aaKnown RBP14.89□□□□□ -0.03
RETREG3-201ENST00000309428 TBC1D2BQ9UPU7 963 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 ZNF165P49910 485 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 BICDL1Q6ZP65 573 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 ERC1Q8IUD2 1116 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 EVI5LQ96CN4 794 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 RAD50Q92878 1312 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 A0A0G2JLW4 131 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 KINO60870 393 aaKnown RBP14.88□□□□□ -0.03
RETREG3-201ENST00000309428 ANO6Q4KMQ2 910 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 LRRC24Q50LG9 513 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 ACSBG1Q96GR2 724 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 FTOQ9C0B1 505 aaKnown RBP eCLIP14.88□□□□□ -0.035e-9■■■■□ 21.6
RETREG3-201ENST00000309428 DNAJC25Q9H1X3 360 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 TPCN1Q9ULQ1 816 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 SNRPA1P09661 255 aaKnown RBP14.88□□□□□ -0.03
RETREG3-201ENST00000309428 GCKRQ14397 625 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 PIBF1Q8WXW3 757 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 LSG1Q9H089 658 aaKnown RBP14.88□□□□□ -0.03
RETREG3-201ENST00000309428 ADCY9O60503 1353 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 BIN1O00499 593 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 KCNQ4P56696 695 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 NEURL1BA8MQ27 555 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 TULP1O00294 542 aaPredicted RBP14.87□□□□□ -0.03
RETREG3-201ENST00000309428 PTPN14Q15678 1187 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 VPS53Q5VIR6 699 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 CCDC171Q6TFL3 1326 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 POLR3DP05423 398 aaPredicted RBP14.87□□□□□ -0.03
RETREG3-201ENST00000309428 DDIT3P35638 169 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 APOBRQ0VD83 1088 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 PYCARDQ9ULZ3 195 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 CYP27B1O15528 508 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 BRD1O95696 1058 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 IFIT1P09914 478 aaKnown RBP14.87□□□□□ -0.03
RETREG3-201ENST00000309428 CCDC57Q2TAC2 916 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 Q6ZUG5 572 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 CCDC24Q8N4L8 307 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 SLC52A2Q9HAB3 445 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 GPHNQ9NQX3 736 aaPredicted RBP14.87□□□□□ -0.03
RETREG3-201ENST00000309428 CNNM1Q9NRU3 951 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 DBNLQ9UJU6 430 aaKnown RBP14.87□□□□□ -0.03
RETREG3-201ENST00000309428 KIF20BQ96Q89 1820 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 GTF2F1P35269 517 aaKnown RBP eCLIP14.86□□□□□ -0.03
RETREG3-201ENST00000309428 TPM4P67936 248 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 C19orf44Q9H6X5 657 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 SRCAPQ6ZRS2 3230 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 F13A1P00488 732 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 HDAC5Q9UQL6 1122 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 SLC27A2O14975 620 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 NPHP3Q7Z494 1330 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 TPM3P06753 285 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 NAA30Q147X3 362 aaPredicted RBP14.85□□□□□ -0.03
RETREG3-201ENST00000309428 TTC39AQ5SRH9 613 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms