RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 NUTM2EB1AL46 878 aaPredicted RBP14.92□□□□□ -0.02
RETREG3-201ENST00000309428 POLR3GO15318 223 aaPredicted RBP14.92□□□□□ -0.02
RETREG3-201ENST00000309428 SASH1O94885 1247 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 RXRAP19793 462 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 SLC4A8Q2Y0W8 1093 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 CCDC73Q6ZRK6 1079 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 NUTM2AQ8IVF1 878 aaPredicted RBP14.92□□□□□ -0.02
RETREG3-201ENST00000309428 SYNE4Q8N205 404 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 LINS1Q8NG48 757 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 MTMR7Q9Y216 660 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 OTUD7BQ6GQQ9 843 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 ISM2Q6H9L7 571 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 ARHGEF25Q86VW2 580 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 ADAMTS2O95450 1211 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 CREB3L3Q68CJ9 461 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 TTLL5Q6EMB2 1281 aa14.92□□□□□ -0.02
RETREG3-201ENST00000309428 LETM1O95202 739 aaPredicted RBP14.91□□□□□ -0.02
RETREG3-201ENST00000309428 HS1BP3Q53T59 392 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 IFNL2Q8IZJ0 200 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 MNS1Q8NEH6 495 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 BCL2L12Q9HB09 334 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 ME3Q16798 604 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 RRP12Q5JTH9 1297 aaKnown RBP14.91□□□□□ -0.02
RETREG3-201ENST00000309428 SIRT1Q96EB6 747 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 PRIMPOLQ96LW4 560 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 CLIP2Q9UDT6 1046 aa14.91□□□□□ -0.02
RETREG3-201ENST00000309428 RNF20Q5VTR2 975 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 ZNF500O60304 480 aaPredicted RBP14.9□□□□□ -0.02
RETREG3-201ENST00000309428 PI16Q6UXB8 463 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 CHMP4AQ9BY43 222 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 DDX21Q9NR30 783 aaKnown RBP eCLIP14.9□□□□□ -0.02
RETREG3-201ENST00000309428 GOLGB1Q14789 3259 aaKnown RBP14.9□□□□□ -0.02
RETREG3-201ENST00000309428 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 IGKV5-2P06315 115 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 DIP2BQ9P265 1576 aa14.9□□□□□ -0.02
RETREG3-201ENST00000309428 SNAP23O00161 211 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 HSPA4P34932 840 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 LRMPQ12912 555 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 CDC37L1Q7L3B6 337 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 MYRIPQ8NFW9 859 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 DACT1Q9NYF0 836 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 IDH1O75874 414 aaKnown RBP14.89□□□□□ -0.03
RETREG3-201ENST00000309428 ZSCAN22P10073 491 aaPredicted RBP14.89□□□□□ -0.03
RETREG3-201ENST00000309428 ME1P48163 572 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 UBE2HP62256 183 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 SMAP1Q8IYB5 467 aaPredicted RBP14.89□□□□□ -0.03
RETREG3-201ENST00000309428 PDILTQ8N807 584 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 PUS3Q9BZE2 481 aaKnown RBP14.89□□□□□ -0.03
RETREG3-201ENST00000309428 TBC1D2BQ9UPU7 963 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 ZNF165P49910 485 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 BICDL1Q6ZP65 573 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 ERC1Q8IUD2 1116 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 EVI5LQ96CN4 794 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 RAD50Q92878 1312 aa14.89□□□□□ -0.03
RETREG3-201ENST00000309428 A0A0G2JLW4 131 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 KINO60870 393 aaKnown RBP14.88□□□□□ -0.03
RETREG3-201ENST00000309428 ANO6Q4KMQ2 910 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 LRRC24Q50LG9 513 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 ACSBG1Q96GR2 724 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 FTOQ9C0B1 505 aaKnown RBP eCLIP14.88□□□□□ -0.035e-9■■■■□ 21.6
RETREG3-201ENST00000309428 DNAJC25Q9H1X3 360 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 TPCN1Q9ULQ1 816 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 SNRPA1P09661 255 aaKnown RBP14.88□□□□□ -0.03
RETREG3-201ENST00000309428 GCKRQ14397 625 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 PIBF1Q8WXW3 757 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 LSG1Q9H089 658 aaKnown RBP14.88□□□□□ -0.03
RETREG3-201ENST00000309428 ADCY9O60503 1353 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 BIN1O00499 593 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 KCNQ4P56696 695 aa14.88□□□□□ -0.03
RETREG3-201ENST00000309428 NEURL1BA8MQ27 555 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 TULP1O00294 542 aaPredicted RBP14.87□□□□□ -0.03
RETREG3-201ENST00000309428 PTPN14Q15678 1187 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 VPS53Q5VIR6 699 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 CCDC171Q6TFL3 1326 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 POLR3DP05423 398 aaPredicted RBP14.87□□□□□ -0.03
RETREG3-201ENST00000309428 DDIT3P35638 169 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 APOBRQ0VD83 1088 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 PYCARDQ9ULZ3 195 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 CYP27B1O15528 508 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 BRD1O95696 1058 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 IFIT1P09914 478 aaKnown RBP14.87□□□□□ -0.03
RETREG3-201ENST00000309428 CCDC57Q2TAC2 916 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 Q6ZUG5 572 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 CCDC24Q8N4L8 307 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 SLC52A2Q9HAB3 445 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 GPHNQ9NQX3 736 aaPredicted RBP14.87□□□□□ -0.03
RETREG3-201ENST00000309428 CNNM1Q9NRU3 951 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 DBNLQ9UJU6 430 aaKnown RBP14.87□□□□□ -0.03
RETREG3-201ENST00000309428 KIF20BQ96Q89 1820 aa14.87□□□□□ -0.03
RETREG3-201ENST00000309428 GTF2F1P35269 517 aaKnown RBP eCLIP14.86□□□□□ -0.03
RETREG3-201ENST00000309428 TPM4P67936 248 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 C19orf44Q9H6X5 657 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 SRCAPQ6ZRS2 3230 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 F13A1P00488 732 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 HDAC5Q9UQL6 1122 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 SLC27A2O14975 620 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 NPHP3Q7Z494 1330 aa14.86□□□□□ -0.03
RETREG3-201ENST00000309428 TPM3P06753 285 aa14.85□□□□□ -0.03
RETREG3-201ENST00000309428 NAA30Q147X3 362 aaPredicted RBP14.85□□□□□ -0.03
RETREG3-201ENST00000309428 TTC39AQ5SRH9 613 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms