RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 GREM2Q9H772 168 aa21.35■■□□□ 1.01
NDUFA11-201ENST00000308961 PPP4R2Q9NY27 417 aa21.35■■□□□ 1.01
NDUFA11-201ENST00000308961 CHMP3Q9Y3E7 222 aa21.35■■□□□ 1.01
NDUFA11-201ENST00000308961 LAMB2P55268 1798 aa21.35■■□□□ 1.01
NDUFA11-201ENST00000308961 SRGAP3O43295 1099 aa21.34■■□□□ 1.01
NDUFA11-201ENST00000308961 FAM161AQ3B820 660 aa21.34■■□□□ 1.01
NDUFA11-201ENST00000308961 BRIP1Q9BX63 1249 aa21.34■■□□□ 1.01
NDUFA11-201ENST00000308961 ANKRD31Q8N7Z5 1873 aa21.34■■□□□ 1.01
NDUFA11-201ENST00000308961 RIC1Q4ADV7 1423 aa21.33■■□□□ 1.01
NDUFA11-201ENST00000308961 KLRG2A4D1S0 409 aaPredicted RBP21.33■■□□□ 1.01
NDUFA11-201ENST00000308961 HSP90B1P14625 803 aaKnown RBP21.33■■□□□ 1.01
NDUFA11-201ENST00000308961 POLD1P28340 1107 aa21.33■■□□□ 1.01
NDUFA11-201ENST00000308961 B4GALNT3Q6L9W6 998 aa21.33■■□□□ 1.01
NDUFA11-201ENST00000308961 KLHDC4Q8TBB5 520 aa21.33■■□□□ 1.01
NDUFA11-201ENST00000308961 SEC31BQ9NQW1 1179 aa21.33■■□□□ 1.01
NDUFA11-201ENST00000308961 HDAC1Q13547 482 aaPredicted RBP21.32■■□□□ 1
NDUFA11-201ENST00000308961 CCDC152Q4G0S7 254 aa21.31■■□□□ 1
NDUFA11-201ENST00000308961 ZNF594Q96JF6 807 aaPredicted RBP21.31■■□□□ 1
NDUFA11-201ENST00000308961 SPON1Q9HCB6 807 aa21.31■■□□□ 1
NDUFA11-201ENST00000308961 PA2G4Q9UQ80 394 aaKnown RBP21.31■■□□□ 1
NDUFA11-201ENST00000308961 COL4A1P02462 1669 aa21.31■■□□□ 1
NDUFA11-201ENST00000308961 ITGA6P23229 1130 aa21.3■■□□□ 1
NDUFA11-201ENST00000308961 CRY2Q49AN0 593 aa21.3■■□□□ 1
NDUFA11-201ENST00000308961 C10orf71Q711Q0 1435 aa21.29■■□□□ 1
NDUFA11-201ENST00000308961 MYH3P11055 1940 aa21.29■■□□□ 1
NDUFA11-201ENST00000308961 RTL9Q8NET4 1388 aa21.29■■□□□ 1
NDUFA11-201ENST00000308961 PTPN12Q05209 780 aaKnown RBP21.29■■□□□ 1
NDUFA11-201ENST00000308961 CCDC136Q96JN2 1154 aa21.29■■□□□ 1
NDUFA11-201ENST00000308961 RWDD1Q9H446 243 aaPredicted RBP21.29■■□□□ 1
NDUFA11-201ENST00000308961 ANKRD18BA2A2Z9 1011 aa21.28■■□□□ 1
NDUFA11-201ENST00000308961 HMMRO75330 724 aa21.28■■□□□ 1
NDUFA11-201ENST00000308961 PDE6BP35913 854 aa21.28■■□□□ 1
NDUFA11-201ENST00000308961 IFIT5Q13325 482 aaKnown RBP21.28■■□□□ 1
NDUFA11-201ENST00000308961 CCDC57Q2TAC2 916 aa21.28■■□□□ 1
NDUFA11-201ENST00000308961 SRGNP10124 158 aa21.27■■□□□ 1
NDUFA11-201ENST00000308961 CHRNA5P30532 468 aa21.27■■□□□ 1
NDUFA11-201ENST00000308961 C2CD5Q86YS7 1000 aa21.27■■□□□ 1
NDUFA11-201ENST00000308961 CELF1Q92879 486 aaKnown RBP21.27■■□□□ 1
NDUFA11-201ENST00000308961 PUS3Q9BZE2 481 aaKnown RBP21.27■■□□□ 1
NDUFA11-201ENST00000308961 DCTPP1Q9H773 170 aa21.27■■□□□ 1
NDUFA11-201ENST00000308961 COPRSQ9NQ92 184 aa21.27■■□□□ 1
NDUFA11-201ENST00000308961 HOXA10P31260 410 aaPredicted RBP21.26■□□□□ 0.99
NDUFA11-201ENST00000308961 NOP58Q9Y2X3 529 aaKnown RBP21.26■□□□□ 0.99
NDUFA11-201ENST00000308961 TAF1P21675 1872 aa21.26■□□□□ 0.99
NDUFA11-201ENST00000308961 SURF6O75683 361 aaKnown RBP21.25■□□□□ 0.99
NDUFA11-201ENST00000308961 DDX46Q7L014 1031 aaKnown RBP21.25■□□□□ 0.99
NDUFA11-201ENST00000308961 SIL1Q9H173 461 aa21.25■□□□□ 0.99
NDUFA11-201ENST00000308961 EXOC6BQ9Y2D4 811 aa21.25■□□□□ 0.99
NDUFA11-201ENST00000308961 KDM2BQ8NHM5 1336 aa21.25■□□□□ 0.99
NDUFA11-201ENST00000308961 LRRC24Q50LG9 513 aa21.24■□□□□ 0.99
NDUFA11-201ENST00000308961 SLC51AQ86UW1 340 aa21.24■□□□□ 0.99
NDUFA11-201ENST00000308961 RPGRQ92834 1020 aaKnown RBP21.24■□□□□ 0.99
NDUFA11-201ENST00000308961 COL11A2P13942 1736 aaPredicted RBP21.24■□□□□ 0.99
NDUFA11-201ENST00000308961 A0A0G2JLW4 131 aa21.23■□□□□ 0.99
NDUFA11-201ENST00000308961 H0YIN7 160 aa21.23■□□□□ 0.99
NDUFA11-201ENST00000308961 NPR1P16066 1061 aa21.23■□□□□ 0.99
NDUFA11-201ENST00000308961 DPEP1P16444 411 aa21.23■□□□□ 0.99
NDUFA11-201ENST00000308961 ATG9AQ7Z3C6 839 aa21.23■□□□□ 0.99
NDUFA11-201ENST00000308961 RBM17Q96I25 401 aaKnown RBP21.23■□□□□ 0.99
NDUFA11-201ENST00000308961 CRAMP1Q96RY5 1269 aa21.23■□□□□ 0.99
NDUFA11-201ENST00000308961 EYA2O00167 538 aa21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 KCNA3P22001 575 aa21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 RPS8P62241 208 aaKnown RBP21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 GRAPQ13588 217 aa21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 TAF7LQ5H9L4 462 aa21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 SMC5Q8IY18 1101 aa21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 GRAPLQ8TC17 118 aaPredicted RBP21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 ZNF622Q969S3 477 aaKnown RBP eCLIP21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 MASTLQ96GX5 879 aa21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 PPP1R1BQ9UD71 204 aaPredicted RBP21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 KIF13BQ9NQT8 1826 aa21.22■□□□□ 0.99
NDUFA11-201ENST00000308961 STYK1Q6J9G0 422 aa21.21■□□□□ 0.99
NDUFA11-201ENST00000308961 LDHAL6AQ6ZMR3 332 aa21.21■□□□□ 0.99
NDUFA11-201ENST00000308961 ANKRD18AQ8IVF6 992 aa21.21■□□□□ 0.99
NDUFA11-201ENST00000308961 KLHL34Q8N239 644 aa21.21■□□□□ 0.99
NDUFA11-201ENST00000308961 CDC5LQ99459 802 aaKnown RBP21.21■□□□□ 0.99
NDUFA11-201ENST00000308961 RIPOR2Q9Y4F9 1068 aa21.21■□□□□ 0.99
NDUFA11-201ENST00000308961 CD2APQ9Y5K6 639 aa21.21■□□□□ 0.99
NDUFA11-201ENST00000308961 APBB1O00213 710 aa21.2■□□□□ 0.98
NDUFA11-201ENST00000308961 SASH1O94885 1247 aa21.2■□□□□ 0.98
NDUFA11-201ENST00000308961 G3BP1Q13283 466 aaKnown RBP eCLIP21.2■□□□□ 0.98
NDUFA11-201ENST00000308961 KIAA1551Q9HCM1 1747 aa21.19■□□□□ 0.98
NDUFA11-201ENST00000308961 IGHMBP2P38935 993 aaKnown RBP21.19■□□□□ 0.98
NDUFA11-201ENST00000308961 TGFB2P61812 414 aa21.19■□□□□ 0.98
NDUFA11-201ENST00000308961 GCC1Q96CN9 775 aa21.19■□□□□ 0.98
NDUFA11-201ENST00000308961 PDZRN3Q9UPQ7 1066 aa21.19■□□□□ 0.98
NDUFA11-201ENST00000308961 SMARCA5O60264 1052 aaPredicted RBP21.18■□□□□ 0.98
NDUFA11-201ENST00000308961 CIAO1O76071 339 aa21.18■□□□□ 0.98
NDUFA11-201ENST00000308961 CENPQQ7L2Z9 268 aaPredicted RBP21.18■□□□□ 0.98
NDUFA11-201ENST00000308961 MPHOSPH8Q99549 860 aa21.18■□□□□ 0.98
NDUFA11-201ENST00000308961 CNNM1Q9NRU3 951 aa21.18■□□□□ 0.98
NDUFA11-201ENST00000308961 BSDC1Q9NW68 430 aaPredicted RBP21.18■□□□□ 0.98
NDUFA11-201ENST00000308961 LRP5O75197 1615 aa21.18■□□□□ 0.98
NDUFA11-201ENST00000308961 OS9Q13438 667 aaPredicted RBP21.17■□□□□ 0.98
NDUFA11-201ENST00000308961 NLGN2Q8NFZ4 835 aa21.17■□□□□ 0.98
NDUFA11-201ENST00000308961 RHPN1Q8TCX5 695 aa21.17■□□□□ 0.98
NDUFA11-201ENST00000308961 SPEF2Q9C093 1822 aa21.16■□□□□ 0.98
NDUFA11-201ENST00000308961 RAB11FIP3O75154 756 aa21.16■□□□□ 0.98
NDUFA11-201ENST00000308961 BBOX1O75936 387 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms