RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 PEAK1Q9H792 1746 aa12.25□□□□□ -0.45
MSRB3-201ENST00000308259 BIRC2Q13490 618 aa12.25□□□□□ -0.45
MSRB3-201ENST00000308259 OSBPL3Q9H4L5 887 aa12.25□□□□□ -0.45
MSRB3-201ENST00000308259 LGR6Q9HBX8 967 aa12.25□□□□□ -0.45
MSRB3-201ENST00000308259 ZNF215Q9UL58 517 aaPredicted RBP12.25□□□□□ -0.45
MSRB3-201ENST00000308259 ANKRD65E5RJM6 399 aa12.24□□□□□ -0.45
MSRB3-201ENST00000308259 TTC5Q8N0Z6 440 aa12.24□□□□□ -0.45
MSRB3-201ENST00000308259 SETD1AO15047 1707 aaKnown RBP12.24□□□□□ -0.45
MSRB3-201ENST00000308259 BRD1O95696 1058 aa12.24□□□□□ -0.45
MSRB3-201ENST00000308259 USP48Q86UV5 1035 aa12.24□□□□□ -0.45
MSRB3-201ENST00000308259 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
MSRB3-201ENST00000308259 SALL3Q9BXA9 1300 aa12.24□□□□□ -0.45
MSRB3-201ENST00000308259 TAF7Q15545 349 aaPredicted RBP12.23□□□□□ -0.45
MSRB3-201ENST00000308259 UVSSAQ2YD98 709 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 GIMAP6Q6P9H5 292 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 RASEFQ8IZ41 740 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 ANKRD7Q92527 254 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 STRN4Q9NRL3 753 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 RRP15Q9Y3B9 282 aaKnown RBP12.23□□□□□ -0.45
MSRB3-201ENST00000308259 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
MSRB3-201ENST00000308259 BECN2A8MW95 431 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 HSP90B2PQ58FF3 399 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 BRMS1Q9HCU9 246 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 CHPF2Q9P2E5 772 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 CNPY2Q9Y2B0 182 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 FLT4P35916 1363 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 USP8P40818 1118 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 FBXW7Q969H0 707 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 MORC2Q9Y6X9 1032 aaPredicted RBP12.23□□□□□ -0.45
MSRB3-201ENST00000308259 HOXC9P31274 260 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 C3P01024 1663 aa12.23□□□□□ -0.45
MSRB3-201ENST00000308259 SPATA31D1Q6ZQQ2 1576 aa12.22□□□□□ -0.45
MSRB3-201ENST00000308259 PI4KAP2A4QPH2 592 aa12.22□□□□□ -0.45
MSRB3-201ENST00000308259 PI4KAP1Q8N8J0 262 aa12.22□□□□□ -0.45
MSRB3-201ENST00000308259 FAM177A1Q8N128 213 aaPredicted RBP12.22□□□□□ -0.45
MSRB3-201ENST00000308259 SRRTQ9BXP5 876 aaKnown RBP12.22□□□□□ -0.45
MSRB3-201ENST00000308259 SUFUQ9UMX1 484 aa12.22□□□□□ -0.45
MSRB3-201ENST00000308259 PA2G4Q9UQ80 394 aaKnown RBP12.22□□□□□ -0.45
MSRB3-201ENST00000308259 ADAMTS13Q76LX8 1427 aa12.22□□□□□ -0.45
MSRB3-201ENST00000308259 PTPRUQ92729 1446 aa12.22□□□□□ -0.45
MSRB3-201ENST00000308259 RBM28Q9NW13 759 aaKnown RBP12.22□□□□□ -0.45
MSRB3-201ENST00000308259 ARHGAP29Q52LW3 1261 aa12.21□□□□□ -0.45
MSRB3-201ENST00000308259 DNAJC21Q5F1R6 531 aaKnown RBP12.21□□□□□ -0.45
MSRB3-201ENST00000308259 RHPN1Q8TCX5 695 aa12.21□□□□□ -0.45
MSRB3-201ENST00000308259 CXorf56Q9H5V9 222 aa12.21□□□□□ -0.45
MSRB3-201ENST00000308259 IGSF1Q8N6C5 1336 aa12.21□□□□□ -0.45
MSRB3-201ENST00000308259 KDM4AO75164 1064 aa12.21□□□□□ -0.45
MSRB3-201ENST00000308259 SLU7O95391 586 aaKnown RBP12.21□□□□□ -0.45
MSRB3-201ENST00000308259 CCDC192P0DO97 292 aa12.21□□□□□ -0.45
MSRB3-201ENST00000308259 CCDC183Q5T5S1 534 aa12.21□□□□□ -0.45
MSRB3-201ENST00000308259 MPRIPQ6WCQ1 1025 aa12.21□□□□□ -0.45
MSRB3-201ENST00000308259 CREBRFQ8IUR6 639 aa12.21□□□□□ -0.45
MSRB3-201ENST00000308259 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.21□□□□□ -0.45
MSRB3-201ENST00000308259 ARHGEF10O15013 1369 aa12.21□□□□□ -0.45
MSRB3-201ENST00000308259 SATB1Q01826 763 aa12.21□□□□□ -0.46
MSRB3-201ENST00000308259 NGLY1Q96IV0 654 aa12.21□□□□□ -0.46
MSRB3-201ENST00000308259 SRCIN1Q9C0H9 1055 aa12.21□□□□□ -0.46
MSRB3-201ENST00000308259 CENPHQ9H3R5 247 aa12.21□□□□□ -0.46
MSRB3-201ENST00000308259 SBNO1A3KN83 1393 aa12.21□□□□□ -0.46
MSRB3-201ENST00000308259 MON2Q7Z3U7 1717 aa12.21□□□□□ -0.46
MSRB3-201ENST00000308259 LARGE1O95461 756 aa12.21□□□□□ -0.46
MSRB3-201ENST00000308259 GUCY2CP25092 1073 aa12.21□□□□□ -0.46
MSRB3-201ENST00000308259 ZC3H6P61129 1189 aaKnown RBP12.21□□□□□ -0.46
MSRB3-201ENST00000308259 LRMPQ12912 555 aa12.21□□□□□ -0.46
MSRB3-201ENST00000308259 KIAA1524Q8TCG1 905 aa12.21□□□□□ -0.46
MSRB3-201ENST00000308259 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.2□□□□□ -0.46
MSRB3-201ENST00000308259 NEBLO76041 1014 aa12.2□□□□□ -0.46
MSRB3-201ENST00000308259 AK2P54819 239 aa12.2□□□□□ -0.46
MSRB3-201ENST00000308259 RNF20Q5VTR2 975 aa12.2□□□□□ -0.46
MSRB3-201ENST00000308259 FBXO38Q6PIJ6 1188 aa12.2□□□□□ -0.46
MSRB3-201ENST00000308259 TCEANC2Q96MN5 208 aa12.2□□□□□ -0.46
MSRB3-201ENST00000308259 PRAMEF22A3QJZ6 481 aa12.2□□□□□ -0.46
MSRB3-201ENST00000308259 COL9A3Q14050 684 aaPredicted RBP12.2□□□□□ -0.46
MSRB3-201ENST00000308259 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
MSRB3-201ENST00000308259 PSEN1P49768 467 aa12.2□□□□□ -0.46
MSRB3-201ENST00000308259 ITSN1Q15811 1721 aa12.19□□□□□ -0.46
MSRB3-201ENST00000308259 CASTP20810 708 aaKnown RBP12.19□□□□□ -0.46
MSRB3-201ENST00000308259 CUL4AQ13619 759 aa12.19□□□□□ -0.46
MSRB3-201ENST00000308259 CAMK4Q16566 473 aa12.19□□□□□ -0.46
MSRB3-201ENST00000308259 SLAIN2Q9P270 581 aa12.19□□□□□ -0.46
MSRB3-201ENST00000308259 SNX14Q9Y5W7 946 aa12.19□□□□□ -0.46
MSRB3-201ENST00000308259 USP31Q70CQ4 1352 aa12.19□□□□□ -0.46
MSRB3-201ENST00000308259 TPM1P09493 284 aa12.19□□□□□ -0.46
MSRB3-201ENST00000308259 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
MSRB3-201ENST00000308259 CCDC83Q8IWF9 413 aa12.19□□□□□ -0.46
MSRB3-201ENST00000308259 CYP2C19P33261 490 aa12.19□□□□□ -0.46
MSRB3-201ENST00000308259 AIMP1Q12904 312 aaKnown RBP12.19□□□□□ -0.46
MSRB3-201ENST00000308259 PI4K2BQ8TCG2 481 aa12.19□□□□□ -0.46
MSRB3-201ENST00000308259 SETD1BQ9UPS6 1966 aaKnown RBP12.19□□□□□ -0.46
MSRB3-201ENST00000308259 DHX8Q14562 1220 aaKnown RBP12.19□□□□□ -0.46
MSRB3-201ENST00000308259 CALR3Q96L12 384 aaKnown RBP12.19□□□□□ -0.46
MSRB3-201ENST00000308259 CPSF2Q9P2I0 782 aaKnown RBP12.19□□□□□ -0.46
MSRB3-201ENST00000308259 ERCC6LQ2NKX8 1250 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 ADCK5Q3MIX3 580 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 NECAB1Q8N987 351 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 HSPA4P34932 840 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 PTH1RQ03431 593 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 CWF19L2Q2TBE0 894 aaKnown RBP12.18□□□□□ -0.46
MSRB3-201ENST00000308259 NBPF6Q5VWK0 638 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms