RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 POLR3DP05423 398 aaPredicted RBP13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 AK2P54819 239 aa13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 UBE2HP62256 183 aa13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 CTCFLQ8NI51 663 aaPredicted RBP13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 NOC3LQ8WTT2 800 aaKnown RBP13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 TMEM67Q5HYA8 995 aa13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 SLC9C2Q5TAH2 1124 aa13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 UTP14AQ9BVJ6 771 aaKnown RBP13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 ANKRD18AQ8IVF6 992 aa13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 CCDC191Q8NCU4 936 aa13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 FAM89AQ96GI7 184 aa13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
PCDHGC3-201ENST00000308177 NPHP4O75161 1426 aaPredicted RBP13.33□□□□□ -0.27
PCDHGC3-201ENST00000308177 ALKQ9UM73 1620 aa13.33□□□□□ -0.27
PCDHGC3-201ENST00000308177 TMEM94Q12767 1356 aa13.33□□□□□ -0.27
PCDHGC3-201ENST00000308177 PHKG2P15735 406 aa13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 MICU3Q86XE3 530 aa13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 CCDC171Q6TFL3 1326 aa13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 RFC4P35249 363 aa13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 MFSD6Q6ZSS7 791 aa13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 ZSCAN29Q8IWY8 852 aaPredicted RBP13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 SSH3Q8TE77 659 aa13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 INTS4Q96HW7 963 aaKnown RBP13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 CEP131Q9UPN4 1083 aa13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 EYA2O00167 538 aa13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 IARSP41252 1262 aaKnown RBP13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 TIMM10P62072 90 aa13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 C8orf37Q96NL8 207 aa13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 DDX19AQ9NUU7 478 aaKnown RBP13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 CEP152O94986 1710 aa13.33□□□□□ -0.28
PCDHGC3-201ENST00000308177 SF3B2Q13435 895 aaKnown RBP13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 Q6ZUG5 572 aa13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 ZSCAN30Q86W11 494 aa13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 RAB11FIP4Q86YS3 637 aa13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 RNF113AO15541 343 aaKnown RBP13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 CKAP2LQ8IYA6 745 aa13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 KLF18A0A0U1RQI7 1052 aa13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 SSRP1Q08945 709 aaKnown RBP13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 TNNI3KQ59H18 835 aa13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 CEP89Q96ST8 783 aa13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 FPGT-TNNI3KV9GXZ4 949 aa13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 METAP2P50579 478 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 SETDB2Q96T68 719 aa13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 IQSEC3Q9UPP2 1182 aaPredicted RBP13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 SETBP1Q9Y6X0 1596 aa13.32□□□□□ -0.28
PCDHGC3-201ENST00000308177 INO80Q9ULG1 1556 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 SGSM2O43147 1006 aa13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 HELBQ8NG08 1087 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 NLRP3Q96P20 1036 aa13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 DBNDD2Q9BQY9 259 aa13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 GSPT1P15170 499 aaKnown RBP13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 FILIP1Q7Z7B0 1213 aa13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 CCDC144CPQ8IYA2 1237 aa13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 MNS1Q8NEH6 495 aa13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 ZSCAN16Q9H4T2 348 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 ZSCAN23Q3MJ62 389 aa13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 A0A0U1RQG5 324 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 DHX8Q14562 1220 aaKnown RBP13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 ZNF444Q8N0Y2 327 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 GOLGA6L1Q8N7Z2 621 aa13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 FSIP1Q8NA03 581 aa13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 ANO10Q9NW15 660 aa13.31□□□□□ -0.28
PCDHGC3-201ENST00000308177 PPRC1Q5VV67 1664 aaKnown RBP13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 CTAGE5O15320 804 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 BEND3Q5T5X7 828 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 CATIPQ7Z7H3 387 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 A0A1B0GUL7 405 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 CDCA7Q9BWT1 371 aaPredicted RBP13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 CNPY2Q9Y2B0 182 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 LMTK3Q96Q04 1460 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 NEURL1BA8MQ27 555 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 SMTNL1A8MU46 457 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 ERVV-2B6SEH9 535 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 F13A1P00488 732 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 RUFY3Q7L099 469 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 MAGEC2Q9UBF1 373 aaPredicted RBP13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 LDHCP07864 332 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 CYP7A1P22680 504 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 CCDC70Q6NSX1 233 aa13.3□□□□□ -0.28
PCDHGC3-201ENST00000308177 CPA1P15085 419 aa13.29□□□□□ -0.28
PCDHGC3-201ENST00000308177 STIM1Q13586 685 aa13.29□□□□□ -0.28
PCDHGC3-201ENST00000308177 USP48Q86UV5 1035 aa13.29□□□□□ -0.28
PCDHGC3-201ENST00000308177 USP25Q9UHP3 1055 aa13.29□□□□□ -0.28
PCDHGC3-201ENST00000308177 CBFA2T2O43439 604 aa13.29□□□□□ -0.28
PCDHGC3-201ENST00000308177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.29□□□□□ -0.28
PCDHGC3-201ENST00000308177 PPP1R1BQ9UD71 204 aaPredicted RBP13.29□□□□□ -0.28
PCDHGC3-201ENST00000308177 LAMC1P11047 1609 aa13.29□□□□□ -0.28
PCDHGC3-201ENST00000308177 SPTY2D1Q68D10 685 aaPredicted RBP13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 CCAR1Q8IX12 1150 aaKnown RBP13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 SMARCE1Q969G3 411 aa13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 CCP110O43303 1012 aa13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 DHX32Q7L7V1 743 aaKnown RBP13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 SLF2Q8IX21 1173 aa13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 SLC4A4Q9Y6R1 1079 aa13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 KDRP35968 1356 aa13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 ZBTB43O43298 467 aa13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 BAG3O95817 575 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms