RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 PTPN14Q15678 1187 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 KLHDC4Q8TBB5 520 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 NEK1Q96PY6 1258 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 HMG20BQ9P0W2 317 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 CTIFO43310 598 aaKnown RBP13.79□□□□□ -0.2
FOXP4-201ENST00000307972 TSPOAP1O95153 1857 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 PLEKHO1Q53GL0 409 aaPredicted RBP13.79□□□□□ -0.2
FOXP4-201ENST00000307972 EDC3Q96F86 508 aaKnown RBP13.79□□□□□ -0.2
FOXP4-201ENST00000307972 SUCLG2Q96I99 432 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 TUBGCP6Q96RT7 1819 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 FAM208AQ9UK61 1670 aaKnown RBP13.79□□□□□ -0.2
FOXP4-201ENST00000307972 TAF6LQ9Y6J9 622 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 NEXNQ0ZGT2 675 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 MTX1Q13505 466 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 NAA30Q147X3 362 aaPredicted RBP13.79□□□□□ -0.2
FOXP4-201ENST00000307972 LMOD2Q6P5Q4 547 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 OGFRQ9NZT2 677 aa13.79□□□□□ -0.2
FOXP4-201ENST00000307972 ADCY9O60503 1353 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 SASH1O94885 1247 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 KIF20AO95235 890 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 PROSER3Q2NL68 480 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 Q6ZUG5 572 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 KCNB2Q92953 911 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 PGBD1Q96JS3 809 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.78□□□□□ -0.2
FOXP4-201ENST00000307972 V9GYY5 206 aaPredicted RBP13.78□□□□□ -0.2
FOXP4-201ENST00000307972 CACNA1FO60840 1977 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 NPHP1O15259 732 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 PPFIA3O75145 1194 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 CAVIN2O95810 425 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 TOB2Q14106 344 aaPredicted RBP13.78□□□□□ -0.2
FOXP4-201ENST00000307972 NBPF6Q5VWK0 638 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 ZNF589Q86UQ0 364 aaPredicted RBP13.78□□□□□ -0.2
FOXP4-201ENST00000307972 PLA2G4DQ86XP0 818 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 NBPF4Q96M43 638 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 SKILP12757 684 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 CCAR1Q8IX12 1150 aaKnown RBP13.78□□□□□ -0.2
FOXP4-201ENST00000307972 ADAMTS13Q76LX8 1427 aa13.78□□□□□ -0.2
FOXP4-201ENST00000307972 ME1P48163 572 aa13.77□□□□□ -0.2
FOXP4-201ENST00000307972 ZSCAN16Q9H4T2 348 aaPredicted RBP13.77□□□□□ -0.2
FOXP4-201ENST00000307972 CEBPAP49715 358 aaPredicted RBP13.77□□□□□ -0.21
FOXP4-201ENST00000307972 STX1AQ16623 288 aa13.77□□□□□ -0.21
FOXP4-201ENST00000307972 CCDC144BQ3MJ40 725 aa13.77□□□□□ -0.21
FOXP4-201ENST00000307972 CCDC144CPQ8IYA2 1237 aa13.77□□□□□ -0.21
FOXP4-201ENST00000307972 LINS1Q8NG48 757 aa13.77□□□□□ -0.21
FOXP4-201ENST00000307972 LRRC59Q96AG4 307 aaKnown RBP13.77□□□□□ -0.21
FOXP4-201ENST00000307972 SDF4Q9BRK5 362 aa13.77□□□□□ -0.21
FOXP4-201ENST00000307972 USP16Q9Y5T5 823 aa13.77□□□□□ -0.21
FOXP4-201ENST00000307972 SETD1BQ9UPS6 1966 aaKnown RBP13.77□□□□□ -0.21
FOXP4-201ENST00000307972 AGLP35573 1532 aa13.76□□□□□ -0.21
FOXP4-201ENST00000307972 GTF3C6Q969F1 213 aa13.76□□□□□ -0.21
FOXP4-201ENST00000307972 NDUFB9Q9Y6M9 179 aa13.76□□□□□ -0.21
FOXP4-201ENST00000307972 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.76□□□□□ -0.21
FOXP4-201ENST00000307972 MYL6BP14649 208 aa13.76□□□□□ -0.21
FOXP4-201ENST00000307972 GUCY1B3Q02153 619 aa13.76□□□□□ -0.21
FOXP4-201ENST00000307972 ARID5BQ14865 1188 aa13.76□□□□□ -0.21
FOXP4-201ENST00000307972 SF3A1Q15459 793 aaKnown RBP13.76□□□□□ -0.21
FOXP4-201ENST00000307972 AKAP4Q5JQC9 854 aa13.76□□□□□ -0.21
FOXP4-201ENST00000307972 TAOK2Q9UL54 1235 aa13.76□□□□□ -0.21
FOXP4-201ENST00000307972 CTAGE5O15320 804 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 NEMFO60524 1076 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 CCDC129Q6ZRS4 1044 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 LRRC8AQ8IWT6 810 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 A0A087WWV3 80 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 PRAMEF22A3QJZ6 481 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 CCDC69A6NI79 296 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 NRDCO43847 1150 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 C11orf57Q6ZUT1 292 aaPredicted RBP13.75□□□□□ -0.21
FOXP4-201ENST00000307972 CEP57L1Q8IYX8 460 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 ANO10Q9NW15 660 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 PTPRUQ92729 1446 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 FMN2Q9NZ56 1722 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 TAF5LO75529 589 aa13.75□□□□□ -0.21
FOXP4-201ENST00000307972 CCT2P78371 535 aaKnown RBP13.75□□□□□ -0.21
FOXP4-201ENST00000307972 NAT10Q9H0A0 1025 aaKnown RBP13.75□□□□□ -0.21
FOXP4-201ENST00000307972 PLEKHG1Q9ULL1 1385 aa13.74□□□□□ -0.21
FOXP4-201ENST00000307972 ZNF396Q96N95 335 aaPredicted RBP13.74□□□□□ -0.21
FOXP4-201ENST00000307972 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.74□□□□□ -0.21
FOXP4-201ENST00000307972 A0A0U1RQG5 324 aaPredicted RBP13.74□□□□□ -0.21
FOXP4-201ENST00000307972 RESTQ13127 1097 aa13.74□□□□□ -0.21
FOXP4-201ENST00000307972 FSIP1Q8NA03 581 aa13.74□□□□□ -0.21
FOXP4-201ENST00000307972 KIF18AQ8NI77 898 aa13.74□□□□□ -0.21
FOXP4-201ENST00000307972 IP6K1Q92551 441 aa13.74□□□□□ -0.21
FOXP4-201ENST00000307972 FMNL2Q96PY5 1086 aa13.74□□□□□ -0.21
FOXP4-201ENST00000307972 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
FOXP4-201ENST00000307972 GIGYF1O75420 1035 aaPredicted RBP13.74□□□□□ -0.21
FOXP4-201ENST00000307972 ERCC4Q92889 916 aaPredicted RBP13.74□□□□□ -0.21
FOXP4-201ENST00000307972 FTOQ9C0B1 505 aaKnown RBP eCLIP13.74□□□□□ -0.21
FOXP4-201ENST00000307972 PSME1Q06323 249 aa13.73□□□□□ -0.21
FOXP4-201ENST00000307972 AOPEPQ8N6M6 819 aa13.73□□□□□ -0.21
FOXP4-201ENST00000307972 CTNNA3Q9UI47 895 aa13.73□□□□□ -0.21
FOXP4-201ENST00000307972 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
FOXP4-201ENST00000307972 SMC2O95347 1197 aa13.73□□□□□ -0.21
FOXP4-201ENST00000307972 SYCP1Q15431 976 aa13.73□□□□□ -0.21
FOXP4-201ENST00000307972 DDX46Q7L014 1031 aaKnown RBP13.73□□□□□ -0.21
FOXP4-201ENST00000307972 ZNF215Q9UL58 517 aaPredicted RBP13.73□□□□□ -0.21
FOXP4-201ENST00000307972 RNMTO43148 476 aaKnown RBP13.73□□□□□ -0.21
FOXP4-201ENST00000307972 RBM43Q6ZSC3 357 aaKnown RBP13.73□□□□□ -0.21
FOXP4-201ENST00000307972 SEC62Q99442 399 aaKnown RBP13.73□□□□□ -0.21
FOXP4-201ENST00000307972 MYD88Q99836 296 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms