RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GNG11P61952 73 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 NEK11Q8NG66 645 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 MRFAP1L1Q96HT8 127 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 EDC4Q6P2E9 1401 aaKnown RBP15.16■□□□□ 0.02
TRIM35-201ENST00000305364 ZSCAN12O43309 604 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 C11orf57Q6ZUT1 292 aaPredicted RBP15.16■□□□□ 0.02
TRIM35-201ENST00000305364 FUCA2Q9BTY2 467 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 ELP1O95163 1332 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 ACEP12821 1306 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 SETBP1Q9Y6X0 1596 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 EFCAB6Q5THR3 1501 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 CBFA2T2O43439 604 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 CASQ1P31415 396 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 KRBA2Q6ZNG9 492 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 ARHGAP31Q2M1Z3 1444 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 SLFN14P0C7P3 912 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 ARFGAP3Q9NP61 516 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 HMG20BQ9P0W2 317 aa15.16■□□□□ 0.02
TRIM35-201ENST00000305364 POGZQ7Z3K3 1410 aa15.15■□□□□ 0.02
TRIM35-201ENST00000305364 PSME1Q06323 249 aa15.15■□□□□ 0.02
TRIM35-201ENST00000305364 CCDC191Q8NCU4 936 aa15.15■□□□□ 0.02
TRIM35-201ENST00000305364 GLI2P10070 1586 aa15.15■□□□□ 0.02
TRIM35-201ENST00000305364 A0A1B0GVL5 298 aa15.15■□□□□ 0.02
TRIM35-201ENST00000305364 PLA2G4DQ86XP0 818 aa15.15■□□□□ 0.02
TRIM35-201ENST00000305364 PI4K2BQ8TCG2 481 aa15.15■□□□□ 0.02
TRIM35-201ENST00000305364 MRPS27Q92552 414 aaKnown RBP15.15■□□□□ 0.02
TRIM35-201ENST00000305364 HSP90AA4PQ58FG1 418 aa15.15■□□□□ 0.02
TRIM35-201ENST00000305364 AEBP2Q6ZN18 517 aaPredicted RBP15.15■□□□□ 0.02
TRIM35-201ENST00000305364 CARD6Q9BX69 1037 aa15.15■□□□□ 0.02
TRIM35-201ENST00000305364 MAP3K19Q56UN5 1328 aa15.14■□□□□ 0.01
TRIM35-201ENST00000305364 GTF2E1P29083 439 aaPredicted RBP15.14■□□□□ 0.01
TRIM35-201ENST00000305364 MAP3K2Q9Y2U5 619 aa15.14■□□□□ 0.01
TRIM35-201ENST00000305364 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.14■□□□□ 0.01
TRIM35-201ENST00000305364 CPSF1Q10570 1443 aaKnown RBP15.14■□□□□ 0.01
TRIM35-201ENST00000305364 IRX5P78411 483 aaPredicted RBP15.14■□□□□ 0.01
TRIM35-201ENST00000305364 CCDC102AQ96A19 550 aa15.14■□□□□ 0.01
TRIM35-201ENST00000305364 UBASH3AP57075 661 aa15.13■□□□□ 0.01
TRIM35-201ENST00000305364 EVCP57679 992 aa15.13■□□□□ 0.01
TRIM35-201ENST00000305364 FAM160A1Q05DH4 1040 aa15.13■□□□□ 0.01
TRIM35-201ENST00000305364 STK11IPQ8N1F8 1099 aa15.13■□□□□ 0.01
TRIM35-201ENST00000305364 EYA1Q99502 592 aa15.13■□□□□ 0.01
TRIM35-201ENST00000305364 UTP14AQ9BVJ6 771 aaKnown RBP15.13■□□□□ 0.01
TRIM35-201ENST00000305364 COL3A1P02461 1466 aaPredicted RBP15.13■□□□□ 0.01
TRIM35-201ENST00000305364 BTBD11A6QL63 1104 aa15.13■□□□□ 0.01
TRIM35-201ENST00000305364 ARHGEF40Q8TER5 1519 aa15.13■□□□□ 0.01
TRIM35-201ENST00000305364 XPO4Q9C0E2 1151 aaKnown RBP15.13■□□□□ 0.01
TRIM35-201ENST00000305364 HNRNPH2P55795 449 aaKnown RBP15.13■□□□□ 0.01
TRIM35-201ENST00000305364 MCM6Q14566 821 aa15.13■□□□□ 0.01
TRIM35-201ENST00000305364 WASHC4Q2M389 1173 aa15.12■□□□□ 0.01
TRIM35-201ENST00000305364 CPLX2Q6PUV4 134 aaKnown RBP15.12■□□□□ 0.01
TRIM35-201ENST00000305364 RALYLQ86SE5 291 aaKnown RBP15.12■□□□□ 0.01
TRIM35-201ENST00000305364 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
TRIM35-201ENST00000305364 TRIM29Q14134 588 aa15.12■□□□□ 0.01
TRIM35-201ENST00000305364 ABTB2Q8N961 1025 aa15.12■□□□□ 0.01
TRIM35-201ENST00000305364 CLCN6P51797 869 aa15.12■□□□□ 0.01
TRIM35-201ENST00000305364 C8orf76Q96K31 380 aa15.12■□□□□ 0.01
TRIM35-201ENST00000305364 EIF3JO75822 258 aaKnown RBP15.11■□□□□ 0.01
TRIM35-201ENST00000305364 RASSF4Q9H2L5 321 aa15.11■□□□□ 0.01
TRIM35-201ENST00000305364 ACBD3Q9H3P7 528 aa15.11■□□□□ 0.01
TRIM35-201ENST00000305364 HOOK1Q9UJC3 728 aaKnown RBP15.11■□□□□ 0.01
TRIM35-201ENST00000305364 CDC25BP30305 580 aa15.11■□□□□ 0.01
TRIM35-201ENST00000305364 PGBD1Q96JS3 809 aa15.11■□□□□ 0.01
TRIM35-201ENST00000305364 SRRTQ9BXP5 876 aaKnown RBP15.11■□□□□ 0.01
TRIM35-201ENST00000305364 FTOQ9C0B1 505 aaKnown RBP eCLIP15.11■□□□□ 0.01
TRIM35-201ENST00000305364 PTPDC1A2A3K4 754 aa15.11■□□□□ 0.01
TRIM35-201ENST00000305364 PES1O00541 588 aaKnown RBP15.11■□□□□ 0.01
TRIM35-201ENST00000305364 ERLIN1O75477 346 aa15.11■□□□□ 0.01
TRIM35-201ENST00000305364 APOBRQ0VD83 1088 aa15.11■□□□□ 0.01
TRIM35-201ENST00000305364 CWF19L2Q2TBE0 894 aaKnown RBP15.11■□□□□ 0.01
TRIM35-201ENST00000305364 ZNF530Q6P9A1 599 aaPredicted RBP15.11■□□□□ 0.01
TRIM35-201ENST00000305364 KLHL34Q8N239 644 aa15.11■□□□□ 0.01
TRIM35-201ENST00000305364 DHX16O60231 1041 aaKnown RBP15.1■□□□□ 0.01
TRIM35-201ENST00000305364 RAB11FIP4Q86YS3 637 aa15.1■□□□□ 0.01
TRIM35-201ENST00000305364 ADGRB3O60242 1522 aa15.1■□□□□ 0.01
TRIM35-201ENST00000305364 A0A0D9SFI3 127 aa15.1■□□□□ 0.01
TRIM35-201ENST00000305364 ATP2B1P20020 1258 aa15.1■□□□□ 0.01
TRIM35-201ENST00000305364 OAS2P29728 719 aaKnown RBP15.1■□□□□ 0.01
TRIM35-201ENST00000305364 JAKMIP3Q5VZ66 844 aa15.1■□□□□ 0.01
TRIM35-201ENST00000305364 THEMISQ8N1K5 641 aaPredicted RBP15.1■□□□□ 0.01
TRIM35-201ENST00000305364 CCDC12Q8WUD4 166 aaPredicted RBP15.1■□□□□ 0.01
TRIM35-201ENST00000305364 ABCC3O15438 1527 aa15.1■□□□□ 0.01
TRIM35-201ENST00000305364 MYL6BP14649 208 aa15.1■□□□□ 0.01
TRIM35-201ENST00000305364 CHST3Q7LGC8 479 aa15.1■□□□□ 0.01
TRIM35-201ENST00000305364 SEC31AO94979 1220 aaKnown RBP15.09■□□□□ 0.01
TRIM35-201ENST00000305364 USP28Q96RU2 1077 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 DBF4Q9UBU7 674 aaPredicted RBP15.09■□□□□ 0.01
TRIM35-201ENST00000305364 TUBB4AP04350 444 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 DDX46Q7L014 1031 aaKnown RBP15.09■□□□□ 0.01
TRIM35-201ENST00000305364 ETF1P62495 437 aaKnown RBP15.09■□□□□ 0.01
TRIM35-201ENST00000305364 TRDNQ13061 729 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 JMYQ8N9B5 988 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 PPP1R13BQ96KQ4 1090 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 NCOA5Q9HCD5 579 aaKnown RBP15.09■□□□□ 0.01
TRIM35-201ENST00000305364 TMEM51Q9NW97 253 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 IMPACTQ9P2X3 320 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 NRXN1Q9ULB1 1477 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 PNMA6AP0CW24 399 aaPredicted RBP15.09■□□□□ 0.01
TRIM35-201ENST00000305364 NECTIN1Q15223 517 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 CCDC129Q6ZRS4 1044 aa15.09■□□□□ 0.01
TRIM35-201ENST00000305364 MAP4K1Q92918 833 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms