RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 EVI5LQ96CN4 794 aa9.41□□□□□ -0.9
NKRF-201ENST00000304449 LTV1Q96GA3 475 aaPredicted RBP9.41□□□□□ -0.9
NKRF-201ENST00000304449 SH2B1Q9NRF2 756 aaPredicted RBP9.41□□□□□ -0.9
NKRF-201ENST00000304449 PA2G4Q9UQ80 394 aaKnown RBP9.41□□□□□ -0.9
NKRF-201ENST00000304449 TAF6LQ9Y6J9 622 aa9.41□□□□□ -0.9
NKRF-201ENST00000304449 ALS2Q96Q42 1657 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 BTBD11A6QL63 1104 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 RBM43Q6ZSC3 357 aaKnown RBP9.4□□□□□ -0.9
NKRF-201ENST00000304449 EAF2Q96CJ1 260 aaPredicted RBP9.4□□□□□ -0.9
NKRF-201ENST00000304449 PHF8Q9UPP1 1060 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 MAP3K2Q9Y2U5 619 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 LAMA4Q16363 1823 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 ELP1O95163 1332 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 COL18A1P39060 1754 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 DNM1Q05193 864 aaKnown RBP9.4□□□□□ -0.9
NKRF-201ENST00000304449 TERF2Q15554 542 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 USPL1Q5W0Q7 1092 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 ARHGEF25Q86VW2 580 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 GTF3C6Q969F1 213 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 LRRC59Q96AG4 307 aaKnown RBP9.4□□□□□ -0.9
NKRF-201ENST00000304449 SUCLG2Q96I99 432 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 ZSCAN31Q96LW9 406 aaPredicted RBP9.4□□□□□ -0.9
NKRF-201ENST00000304449 TMX1Q9H3N1 280 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 PDRG1Q9NUG6 133 aa9.4□□□□□ -0.9
NKRF-201ENST00000304449 SETD1BQ9UPS6 1966 aaKnown RBP9.4□□□□□ -0.91
NKRF-201ENST00000304449 IGKV5-2P06315 115 aa9.39□□□□□ -0.91
NKRF-201ENST00000304449 TOB2Q14106 344 aaPredicted RBP9.39□□□□□ -0.91
NKRF-201ENST00000304449 CREB3L3Q68CJ9 461 aa9.39□□□□□ -0.91
NKRF-201ENST00000304449 PRPF40BQ6NWY9 871 aaKnown RBP9.39□□□□□ -0.91
NKRF-201ENST00000304449 FAM173BQ6P4H8 233 aa9.39□□□□□ -0.91
NKRF-201ENST00000304449 KRT222Q8N1A0 295 aa9.39□□□□□ -0.91
NKRF-201ENST00000304449 FAM227BQ96M60 508 aa9.39□□□□□ -0.91
NKRF-201ENST00000304449 CWF19L2Q2TBE0 894 aaKnown RBP9.39□□□□□ -0.91
NKRF-201ENST00000304449 CCDC83Q8IWF9 413 aa9.39□□□□□ -0.91
NKRF-201ENST00000304449 TLR7Q9NYK1 1049 aaKnown RBP9.39□□□□□ -0.91
NKRF-201ENST00000304449 SLC27A2O14975 620 aa9.39□□□□□ -0.91
NKRF-201ENST00000304449 MPRIPQ6WCQ1 1025 aa9.39□□□□□ -0.91
NKRF-201ENST00000304449 JAKMIP1Q96N16 626 aaKnown RBP9.39□□□□□ -0.91
NKRF-201ENST00000304449 DDX41Q9UJV9 622 aaKnown RBP9.39□□□□□ -0.91
NKRF-201ENST00000304449 SMC3Q9UQE7 1217 aa9.39□□□□□ -0.91
NKRF-201ENST00000304449 RBM8AQ9Y5S9 174 aaKnown RBP9.39□□□□□ -0.91
NKRF-201ENST00000304449 TMEM94Q12767 1356 aa9.39□□□□□ -0.91
NKRF-201ENST00000304449 ARFGEF2Q9Y6D5 1785 aa9.38□□□□□ -0.91
NKRF-201ENST00000304449 POLR3GO15318 223 aaPredicted RBP9.38□□□□□ -0.91
NKRF-201ENST00000304449 GABPB1Q06547 395 aaPredicted RBP9.38□□□□□ -0.91
NKRF-201ENST00000304449 ELF2Q15723 593 aa9.38□□□□□ -0.91
NKRF-201ENST00000304449 AMOTQ4VCS5 1084 aa9.38□□□□□ -0.91
NKRF-201ENST00000304449 TTC6Q86TZ1 520 aa9.38□□□□□ -0.91
NKRF-201ENST00000304449 CLASRPQ8N2M8 674 aaKnown RBP9.38□□□□□ -0.91
NKRF-201ENST00000304449 KIF18AQ8NI77 898 aa9.38□□□□□ -0.91
NKRF-201ENST00000304449 ZNF215Q9UL58 517 aaPredicted RBP9.38□□□□□ -0.91
NKRF-201ENST00000304449 DDX60Q8IY21 1712 aaKnown RBP9.38□□□□□ -0.91
NKRF-201ENST00000304449 A0A0D9SFI3 127 aa9.38□□□□□ -0.91
NKRF-201ENST00000304449 CTIFO43310 598 aaKnown RBP9.38□□□□□ -0.91
NKRF-201ENST00000304449 NMIQ13287 307 aaPredicted RBP9.38□□□□□ -0.91
NKRF-201ENST00000304449 ERC1Q8IUD2 1116 aa9.38□□□□□ -0.91
NKRF-201ENST00000304449 LINS1Q8NG48 757 aa9.38□□□□□ -0.91
NKRF-201ENST00000304449 CYP46A1Q9Y6A2 500 aa9.38□□□□□ -0.91
NKRF-201ENST00000304449 KDM6AO15550 1401 aaPredicted RBP9.38□□□□□ -0.91
NKRF-201ENST00000304449 GOLGA6L4A6NEF3 574 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 CCDC192P0DO97 292 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 RFX5P48382 616 aaPredicted RBP9.37□□□□□ -0.91
NKRF-201ENST00000304449 KCNH5Q8NCM2 988 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 RUFY2Q8WXA3 655 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 BICC1Q9H694 974 aaKnown RBP9.37□□□□□ -0.91
NKRF-201ENST00000304449 GRM8O00222 908 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 ARID5BQ14865 1188 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 KMT5BQ4FZB7 885 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 GORABQ5T7V8 394 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 CDC37L1Q7L3B6 337 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 FILIP1Q7Z7B0 1213 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 AXIN2Q9Y2T1 843 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 PKD1L3Q7Z443 1732 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 ADAMTSL3P82987 1691 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 ZNF530Q6P9A1 599 aaPredicted RBP9.37□□□□□ -0.91
NKRF-201ENST00000304449 ZNF589Q86UQ0 364 aaPredicted RBP9.37□□□□□ -0.91
NKRF-201ENST00000304449 ATP6V1DQ9Y5K8 247 aa9.37□□□□□ -0.91
NKRF-201ENST00000304449 AFDNP55196 1824 aaKnown RBP9.36□□□□□ -0.91
NKRF-201ENST00000304449 SMTNL1A8MU46 457 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 PLEKHO1Q53GL0 409 aaPredicted RBP9.36□□□□□ -0.91
NKRF-201ENST00000304449 CEP135Q66GS9 1140 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 NECAB1Q8N987 351 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 CHMP4CQ96CF2 233 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 DDX21Q9NR30 783 aaKnown RBP eCLIP9.36□□□□□ -0.91
NKRF-201ENST00000304449 MRVI1Q9Y6F6 885 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 TJP1Q07157 1748 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 NUP188Q5SRE5 1749 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 LAMB4A4D0S4 1761 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 CAPN2P17655 700 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 RPS6KB1P23443 525 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 EPHA10Q5JZY3 1008 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 AACSQ86V21 672 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 RFX7Q2KHR2 1363 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 USP27XA6NNY8 438 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 TAF5LO75529 589 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 LIG1P18858 919 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 ANO6Q4KMQ2 910 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 FBXO38Q6PIJ6 1188 aa9.36□□□□□ -0.91
NKRF-201ENST00000304449 DNAJC2Q99543 621 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms