RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 ANKRD18BA2A2Z9 1011 aa18.02■□□□□ 0.47
PPP4R4-201ENST00000304338 IDH1O75874 414 aaKnown RBP18.02■□□□□ 0.47
PPP4R4-201ENST00000304338 TRIM44Q96DX7 344 aaPredicted RBP18.02■□□□□ 0.47
PPP4R4-201ENST00000304338 PAG1Q9NWQ8 432 aa18.01■□□□□ 0.47
PPP4R4-201ENST00000304338 FERMT3Q86UX7 667 aa18.01■□□□□ 0.47
PPP4R4-201ENST00000304338 ZNF589Q86UQ0 364 aaPredicted RBP18.01■□□□□ 0.47
PPP4R4-201ENST00000304338 RGPD5Q99666 1765 aa18■□□□□ 0.47
PPP4R4-201ENST00000304338 FIBPO43427 364 aa18■□□□□ 0.47
PPP4R4-201ENST00000304338 ITGA6P23229 1130 aa18■□□□□ 0.47
PPP4R4-201ENST00000304338 ATP5JP18859 108 aa18■□□□□ 0.47
PPP4R4-201ENST00000304338 TOMM22Q9NS69 142 aa18■□□□□ 0.47
PPP4R4-201ENST00000304338 AKAP2Q9Y2D5 859 aa18■□□□□ 0.47
PPP4R4-201ENST00000304338 NKX1-1Q15270 411 aaPredicted RBP17.99■□□□□ 0.47
PPP4R4-201ENST00000304338 UTYO14607 1347 aa17.99■□□□□ 0.47
PPP4R4-201ENST00000304338 HAND2P61296 217 aa17.99■□□□□ 0.47
PPP4R4-201ENST00000304338 FOXO4P98177 505 aa17.99■□□□□ 0.47
PPP4R4-201ENST00000304338 PLCB2Q00722 1185 aa17.99■□□□□ 0.47
PPP4R4-201ENST00000304338 GOLGA6L4A6NEF3 574 aa17.99■□□□□ 0.47
PPP4R4-201ENST00000304338 ATP2B3Q16720 1220 aa17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 STK11IPQ8N1F8 1099 aa17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 NIP7Q9Y221 180 aaKnown RBP eCLIP17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 MCMDC2Q4G0Z9 681 aa17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 MARF1Q9Y4F3 1742 aaKnown RBP17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 SLC27A2O14975 620 aa17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 GIGYF2Q6Y7W6 1299 aaKnown RBP17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 DDX11Q96FC9 970 aa17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 RBM27Q9P2N5 1060 aaKnown RBP17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 WDR33Q9C0J8 1336 aaKnown RBP17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 ADORA1P30542 326 aa17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 LRRFIP1Q32MZ4 808 aaKnown RBP17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 FAM184AQ8NB25 1140 aa17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 GREM2Q9H772 168 aa17.98■□□□□ 0.47
PPP4R4-201ENST00000304338 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
PPP4R4-201ENST00000304338 LARP1BQ659C4 914 aaKnown RBP17.97■□□□□ 0.47
PPP4R4-201ENST00000304338 XAGE2Q96GT9 111 aa17.97■□□□□ 0.47
PPP4R4-201ENST00000304338 H3BQV1 296 aa17.97■□□□□ 0.47
PPP4R4-201ENST00000304338 GJB2P29033 226 aa17.97■□□□□ 0.47
PPP4R4-201ENST00000304338 RFX5P48382 616 aaPredicted RBP17.97■□□□□ 0.47
PPP4R4-201ENST00000304338 IFFO2Q5TF58 517 aa17.97■□□□□ 0.47
PPP4R4-201ENST00000304338 CHST3Q7LGC8 479 aa17.97■□□□□ 0.47
PPP4R4-201ENST00000304338 ZBTB38Q8NAP3 1195 aaPredicted RBP17.97■□□□□ 0.47
PPP4R4-201ENST00000304338 PANK2Q9BZ23 570 aa17.97■□□□□ 0.47
PPP4R4-201ENST00000304338 KDM4AO75164 1064 aa17.96■□□□□ 0.47
PPP4R4-201ENST00000304338 IQSEC3Q9UPP2 1182 aaPredicted RBP17.96■□□□□ 0.47
PPP4R4-201ENST00000304338 KCNQ2O43526 872 aa17.96■□□□□ 0.47
PPP4R4-201ENST00000304338 RABL6Q3YEC7 729 aaPredicted RBP17.96■□□□□ 0.47
PPP4R4-201ENST00000304338 PI16Q6UXB8 463 aa17.96■□□□□ 0.47
PPP4R4-201ENST00000304338 RUFY3Q7L099 469 aa17.96■□□□□ 0.46
PPP4R4-201ENST00000304338 RNF214Q8ND24 703 aa17.95■□□□□ 0.46
PPP4R4-201ENST00000304338 LOC102724428A0A0B4J2F2 783 aa17.95■□□□□ 0.46
PPP4R4-201ENST00000304338 SIK1P57059 783 aa17.95■□□□□ 0.46
PPP4R4-201ENST00000304338 SMIM5Q71RC9 77 aa17.95■□□□□ 0.46
PPP4R4-201ENST00000304338 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
PPP4R4-201ENST00000304338 KBTBD3Q8NAB2 608 aa17.95■□□□□ 0.46
PPP4R4-201ENST00000304338 FAM208AQ9UK61 1670 aaKnown RBP17.95■□□□□ 0.46
PPP4R4-201ENST00000304338 PCCAP05165 728 aaPredicted RBP17.95■□□□□ 0.46
PPP4R4-201ENST00000304338 CYP19A1P11511 503 aaPredicted RBP17.95■□□□□ 0.46
PPP4R4-201ENST00000304338 VPS37DQ86XT2 251 aa17.95■□□□□ 0.46
PPP4R4-201ENST00000304338 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
PPP4R4-201ENST00000304338 CCDC24Q8N4L8 307 aa17.94■□□□□ 0.46
PPP4R4-201ENST00000304338 GRPEL1Q9HAV7 217 aa17.94■□□□□ 0.46
PPP4R4-201ENST00000304338 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
PPP4R4-201ENST00000304338 TAF5LO75529 589 aa17.94■□□□□ 0.46
PPP4R4-201ENST00000304338 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
PPP4R4-201ENST00000304338 CRKLP46109 303 aaKnown RBP17.94■□□□□ 0.46
PPP4R4-201ENST00000304338 ZSCAN31Q96LW9 406 aaPredicted RBP17.94■□□□□ 0.46
PPP4R4-201ENST00000304338 ATP6V1DQ9Y5K8 247 aa17.94■□□□□ 0.46
PPP4R4-201ENST00000304338 LRRC37A3O60309 1634 aa17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 SNAP23O00161 211 aa17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 STX6O43752 255 aa17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 MRE11P49959 708 aa17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 ATG9AQ7Z3C6 839 aa17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 HAUS7Q99871 368 aa17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 MAP4K1Q92918 833 aa17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 BRF1Q92994 677 aa17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 TRPM3Q9HCF6 1732 aaPredicted RBP17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 LARGE1O95461 756 aa17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 ISCA1Q9BUE6 129 aa17.93■□□□□ 0.46
PPP4R4-201ENST00000304338 VIRMAQ69YN4 1812 aaKnown RBP17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 ZAP70P43403 619 aa17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 CCT2P78371 535 aaKnown RBP17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 KRT32Q14532 448 aa17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 RALYLQ86SE5 291 aaKnown RBP17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 RAB11FIP4Q86YS3 637 aa17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 VSIG10Q8N0Z9 540 aa17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 XRCC6P12956 609 aaKnown RBP eCLIP17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 IGHMBP2P38935 993 aaKnown RBP17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 ANKRD1Q15327 319 aa17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 VPS53Q5VIR6 699 aa17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 INTS4Q96HW7 963 aaKnown RBP17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 UTP14AQ9BVJ6 771 aaKnown RBP17.92■□□□□ 0.46
PPP4R4-201ENST00000304338 CTSWP56202 376 aa17.91■□□□□ 0.46
PPP4R4-201ENST00000304338 CEBPZQ03701 1054 aaKnown RBP17.91■□□□□ 0.46
PPP4R4-201ENST00000304338 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.91■□□□□ 0.46
PPP4R4-201ENST00000304338 TAF6LQ9Y6J9 622 aa17.91■□□□□ 0.46
PPP4R4-201ENST00000304338 USP42Q9H9J4 1324 aaKnown RBP17.91■□□□□ 0.46
PPP4R4-201ENST00000304338 SYT1P21579 422 aa17.91■□□□□ 0.46
PPP4R4-201ENST00000304338 DDIT3P35638 169 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms