RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 KSR2Q6VAB6 950 aa15.11■□□□□ 0.01
ABR-202ENST00000302538 NCOA7Q8NI08 942 aa15.11■□□□□ 0.01
ABR-202ENST00000302538 BICD1Q96G01 975 aa15.11■□□□□ 0.01
ABR-202ENST00000302538 ZNF397Q8NF99 534 aaPredicted RBP15.11■□□□□ 0.01
ABR-202ENST00000302538 IP6K1Q92551 441 aa15.11■□□□□ 0.01
ABR-202ENST00000302538 IL16Q14005 1332 aa15.11■□□□□ 0.01
ABR-202ENST00000302538 HELBQ8NG08 1087 aaPredicted RBP15.11■□□□□ 0.01
ABR-202ENST00000302538 USP16Q9Y5T5 823 aa15.11■□□□□ 0.01
ABR-202ENST00000302538 H0YIN7 160 aa15.11■□□□□ 0.01
ABR-202ENST00000302538 IDEP14735 1019 aa15.11■□□□□ 0.01
ABR-202ENST00000302538 SYCP3Q8IZU3 236 aa15.11■□□□□ 0.01
ABR-202ENST00000302538 PLCG2P16885 1265 aa15.1■□□□□ 0.01
ABR-202ENST00000302538 FKBP15Q5T1M5 1219 aa15.1■□□□□ 0.01
ABR-202ENST00000302538 GRM8O00222 908 aa15.1■□□□□ 0.01
ABR-202ENST00000302538 IL15P40933 162 aaPredicted RBP15.1■□□□□ 0.01
ABR-202ENST00000302538 STXBP4Q6ZWJ1 553 aa15.1■□□□□ 0.01
ABR-202ENST00000302538 MAP3K19Q56UN5 1328 aa15.1■□□□□ 0.01
ABR-202ENST00000302538 HMGN5P82970 282 aaKnown RBP15.1■□□□□ 0.01
ABR-202ENST00000302538 RAB11FIP4Q86YS3 637 aa15.1■□□□□ 0.01
ABR-202ENST00000302538 JAG2Q9Y219 1238 aa15.1■□□□□ 0.01
ABR-202ENST00000302538 POLR3AO14802 1390 aaPredicted RBP15.1■□□□□ 0.01
ABR-202ENST00000302538 SMTNL1A8MU46 457 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 MTHFSDQ2M296 383 aaKnown RBP15.09■□□□□ 0.01
ABR-202ENST00000302538 LARGE2Q8N3Y3 721 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 TAF4BQ92750 862 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 METAP2P50579 478 aaKnown RBP eCLIP15.09■□□□□ 0.01
ABR-202ENST00000302538 CETN1Q12798 172 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 ZRSR2Q15696 482 aaKnown RBP15.09■□□□□ 0.01
ABR-202ENST00000302538 FERMT2Q96AC1 680 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 SH2B1Q9NRF2 756 aaPredicted RBP15.09■□□□□ 0.01
ABR-202ENST00000302538 CCDC87Q9NVE4 849 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 EFCAB6Q5THR3 1501 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 TRIM27P14373 513 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 JAKMIP3Q5VZ66 844 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 SMARCC2Q8TAQ2 1214 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 ZFYVE9O95405 1425 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 ANAPC15P60006 121 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 WTAPQ15007 396 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 CACNA2D4Q7Z3S7 1137 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 TTC16Q8NEE8 873 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 ESR2Q92731 530 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 NKTRP30414 1462 aaKnown RBP15.09■□□□□ 0.01
ABR-202ENST00000302538 ARAP3Q8WWN8 1544 aa15.09■□□□□ 0.01
ABR-202ENST00000302538 ALDH1L1O75891 902 aa15.08■□□□□ 0.01
ABR-202ENST00000302538 FGFR1OPO95684 399 aaKnown RBP15.08■□□□□ 0.01
ABR-202ENST00000302538 LDHBP07195 334 aaKnown RBP15.08■□□□□ 0.01
ABR-202ENST00000302538 HOXC9P31274 260 aa15.08■□□□□ 0.01
ABR-202ENST00000302538 PLCD3Q8N3E9 789 aa15.08■□□□□ 0.01
ABR-202ENST00000302538 SLC26A6Q9BXS9 759 aa15.08■□□□□ 0.01
ABR-202ENST00000302538 MAGEB6P1A0A0J9YX57 407 aa15.08■□□□□ 0.01
ABR-202ENST00000302538 UFL1O94874 794 aa15.08■□□□□ 0.01
ABR-202ENST00000302538 ZFYP08048 801 aaPredicted RBP15.08■□□□□ 0.01
ABR-202ENST00000302538 IFIT1BQ5T764 474 aaKnown RBP15.08■□□□□ 0.01
ABR-202ENST00000302538 CLASP1Q7Z460 1538 aa15.08■□□□□ 0
ABR-202ENST00000302538 SLC9C2Q5TAH2 1124 aa15.08■□□□□ 0
ABR-202ENST00000302538 EDC4Q6P2E9 1401 aaKnown RBP15.08■□□□□ 0
ABR-202ENST00000302538 KIAA1328Q86T90 577 aa15.08■□□□□ 0
ABR-202ENST00000302538 KRT23Q9C075 422 aa15.08■□□□□ 0
ABR-202ENST00000302538 PARD3Q8TEW0 1356 aa15.08■□□□□ 0
ABR-202ENST00000302538 PLEKHG3A1L390 1219 aa15.08■□□□□ 0
ABR-202ENST00000302538 FAM177A1Q8N128 213 aaPredicted RBP15.08■□□□□ 0
ABR-202ENST00000302538 PLEKHG1Q9ULL1 1385 aa15.08■□□□□ 0
ABR-202ENST00000302538 EYA1Q99502 592 aa15.08■□□□□ 0
ABR-202ENST00000302538 ENOX2Q16206 610 aaKnown RBP15.07■□□□□ 0
ABR-202ENST00000302538 TCERG1LQ5VWI1 586 aa15.07■□□□□ 0
ABR-202ENST00000302538 VPS36Q86VN1 386 aa15.07■□□□□ 0
ABR-202ENST00000302538 COL17A1Q9UMD9 1497 aaPredicted RBP15.07■□□□□ 0
ABR-202ENST00000302538 AMPD3Q01432 767 aa15.07■□□□□ 0
ABR-202ENST00000302538 PICK1Q9NRD5 415 aa15.07■□□□□ 0
ABR-202ENST00000302538 TBCAO75347 108 aaKnown RBP15.07■□□□□ 0
ABR-202ENST00000302538 PRIM1P49642 420 aaKnown RBP15.07■□□□□ 0
ABR-202ENST00000302538 MRE11P49959 708 aa15.07■□□□□ 0
ABR-202ENST00000302538 EAPPQ56P03 285 aaPredicted RBP15.07■□□□□ 0
ABR-202ENST00000302538 ERMNQ8TAM6 284 aa15.07■□□□□ 0
ABR-202ENST00000302538 PRKCSHP14314 528 aaPredicted RBP15.07■□□□□ 0
ABR-202ENST00000302538 DDX17Q92841 729 aaKnown RBP15.07■□□□□ 0
ABR-202ENST00000302538 MCM9Q9NXL9 1143 aa15.07■□□□□ 0
ABR-202ENST00000302538 UBA7P41226 1012 aa15.06■□□□□ 0
ABR-202ENST00000302538 RHPN1Q8TCX5 695 aa15.06■□□□□ 0
ABR-202ENST00000302538 USP8P40818 1118 aa15.06■□□□□ 0
ABR-202ENST00000302538 CFAP100Q494V2 611 aa15.06■□□□□ 0
ABR-202ENST00000302538 EPB41L2O43491 1005 aaKnown RBP15.06■□□□□ 0
ABR-202ENST00000302538 WDR70Q9NW82 654 aa15.06■□□□□ 0
ABR-202ENST00000302538 PUF60Q9UHX1 559 aaKnown RBP15.06■□□□□ 0
ABR-202ENST00000302538 ARHGEF10O15013 1369 aa15.06■□□□□ 0
ABR-202ENST00000302538 NPHP4O75161 1426 aaPredicted RBP15.06■□□□□ 0
ABR-202ENST00000302538 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.06■□□□□ 0
ABR-202ENST00000302538 HEATR3Q7Z4Q2 680 aa15.06■□□□□ 0
ABR-202ENST00000302538 NLRP1Q9C000 1473 aa15.06■□□□□ 0
ABR-202ENST00000302538 UGGT1Q9NYU2 1555 aa15.05■□□□□ 0
ABR-202ENST00000302538 RNMTO43148 476 aaKnown RBP15.05■□□□□ -0
ABR-202ENST00000302538 TSHZ3Q63HK5 1081 aa15.05■□□□□ -0
ABR-202ENST00000302538 BCS1LQ9Y276 419 aa15.05■□□□□ -0
ABR-202ENST00000302538 GOLGA6L10A6NI86 522 aa15.05■□□□□ -0
ABR-202ENST00000302538 CAMK4Q16566 473 aa15.05■□□□□ -0
ABR-202ENST00000302538 NEK1Q96PY6 1258 aa15.05■□□□□ -0
ABR-202ENST00000302538 MCM5P33992 734 aa15.05■□□□□ -0
ABR-202ENST00000302538 NCBP1Q09161 790 aaKnown RBP15.05■□□□□ -0
ABR-202ENST00000302538 CCDC174Q6PII3 467 aa15.05■□□□□ -0
ABR-202ENST00000302538 ORC3Q9UBD5 711 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms