RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 NUTM2BA6NNL0 878 aaPredicted RBP12.07□□□□□ -0.48
FOXN4-201ENST00000299162 NUTM2EB1AL46 878 aaPredicted RBP12.07□□□□□ -0.48
FOXN4-201ENST00000299162 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
FOXN4-201ENST00000299162 TNNI3KQ59H18 835 aa12.07□□□□□ -0.48
FOXN4-201ENST00000299162 NUTM2AQ8IVF1 878 aaPredicted RBP12.07□□□□□ -0.48
FOXN4-201ENST00000299162 CNPY2Q9Y2B0 182 aa12.07□□□□□ -0.48
FOXN4-201ENST00000299162 FPGT-TNNI3KV9GXZ4 949 aa12.07□□□□□ -0.48
FOXN4-201ENST00000299162 PXDNLA1KZ92 1463 aa12.07□□□□□ -0.48
FOXN4-201ENST00000299162 HSP90B1P14625 803 aaKnown RBP12.06□□□□□ -0.48
FOXN4-201ENST00000299162 ANAPC15P60006 121 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 CREB3L3Q68CJ9 461 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 CCDC171Q6TFL3 1326 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 WDR17Q8IZU2 1322 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 NCAPD2Q15021 1401 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 ZBTB22O15209 634 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 OFD1O75665 1012 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 MCM2P49736 904 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 CBX1P83916 185 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 CWC25Q9NXE8 425 aaPredicted RBP12.06□□□□□ -0.48
FOXN4-201ENST00000299162 TMEM63CQ9P1W3 806 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 LIMCH1Q9UPQ0 1083 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 AOX1Q06278 1338 aa12.06□□□□□ -0.48
FOXN4-201ENST00000299162 CYP2E1P05181 493 aaPredicted RBP12.05□□□□□ -0.48
FOXN4-201ENST00000299162 CHST3Q7LGC8 479 aa12.05□□□□□ -0.48
FOXN4-201ENST00000299162 PLBD2Q8NHP8 589 aa12.05□□□□□ -0.48
FOXN4-201ENST00000299162 PCDH11XQ9BZA7 1347 aa12.05□□□□□ -0.48
FOXN4-201ENST00000299162 PCDH11YQ9BZA8 1340 aa12.05□□□□□ -0.48
FOXN4-201ENST00000299162 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
FOXN4-201ENST00000299162 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
FOXN4-201ENST00000299162 GJB2P29033 226 aa12.05□□□□□ -0.48
FOXN4-201ENST00000299162 SECISBP2LQ93073 1101 aaKnown RBP12.05□□□□□ -0.48
FOXN4-201ENST00000299162 ACSBG1Q96GR2 724 aa12.05□□□□□ -0.48
FOXN4-201ENST00000299162 DNAJC5Q9H3Z4 198 aa12.05□□□□□ -0.48
FOXN4-201ENST00000299162 SLIT3O75094 1523 aa12.05□□□□□ -0.48
FOXN4-201ENST00000299162 DDX11Q96FC9 970 aa12.05□□□□□ -0.48
FOXN4-201ENST00000299162 TBC1D2BQ9UPU7 963 aa12.05□□□□□ -0.48
FOXN4-201ENST00000299162 KDM4AO75164 1064 aa12.04□□□□□ -0.48
FOXN4-201ENST00000299162 SYT1P21579 422 aa12.04□□□□□ -0.48
FOXN4-201ENST00000299162 RBSNQ9H1K0 784 aa12.04□□□□□ -0.48
FOXN4-201ENST00000299162 SLC27A2O14975 620 aa12.04□□□□□ -0.48
FOXN4-201ENST00000299162 BRD1O95696 1058 aa12.04□□□□□ -0.48
FOXN4-201ENST00000299162 ME3Q16798 604 aa12.04□□□□□ -0.48
FOXN4-201ENST00000299162 LRP10Q7Z4F1 713 aa12.04□□□□□ -0.48
FOXN4-201ENST00000299162 USP48Q86UV5 1035 aa12.04□□□□□ -0.48
FOXN4-201ENST00000299162 RAB11FIP4Q86YS3 637 aa12.04□□□□□ -0.48
FOXN4-201ENST00000299162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.04□□□□□ -0.48
FOXN4-201ENST00000299162 A0A0G2JLW4 131 aa12.03□□□□□ -0.48
FOXN4-201ENST00000299162 BLOC1S2Q6QNY1 142 aa12.03□□□□□ -0.48
FOXN4-201ENST00000299162 PI16Q6UXB8 463 aa12.03□□□□□ -0.48
FOXN4-201ENST00000299162 VPS53Q5VIR6 699 aa12.03□□□□□ -0.48
FOXN4-201ENST00000299162 TPCN1Q9ULQ1 816 aa12.03□□□□□ -0.48
FOXN4-201ENST00000299162 GOLGB1Q14789 3259 aaKnown RBP12.03□□□□□ -0.48
FOXN4-201ENST00000299162 STX6O43752 255 aa12.02□□□□□ -0.48
FOXN4-201ENST00000299162 HAND2P61296 217 aa12.02□□□□□ -0.48
FOXN4-201ENST00000299162 CEBPZQ03701 1054 aaKnown RBP12.02□□□□□ -0.48
FOXN4-201ENST00000299162 DMTNQ08495 405 aa12.02□□□□□ -0.48
FOXN4-201ENST00000299162 CUL4AQ13619 759 aa12.02□□□□□ -0.48
FOXN4-201ENST00000299162 WASHC4Q2M389 1173 aa12.02□□□□□ -0.48
FOXN4-201ENST00000299162 CCDC57Q2TAC2 916 aa12.02□□□□□ -0.48
FOXN4-201ENST00000299162 C17orf53Q8N3J3 647 aaPredicted RBP12.02□□□□□ -0.48
FOXN4-201ENST00000299162 PIGBQ92521 554 aa12.02□□□□□ -0.48
FOXN4-201ENST00000299162 ZNF142P52746 1687 aaPredicted RBP12.02□□□□□ -0.48
FOXN4-201ENST00000299162 DNM1Q05193 864 aaKnown RBP12.02□□□□□ -0.49
FOXN4-201ENST00000299162 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.49
FOXN4-201ENST00000299162 CACNA1FO60840 1977 aa12.02□□□□□ -0.49
FOXN4-201ENST00000299162 PIP4K2BP78356 416 aa12.02□□□□□ -0.49
FOXN4-201ENST00000299162 WDR33Q9C0J8 1336 aaKnown RBP12.01□□□□□ -0.49
FOXN4-201ENST00000299162 SPDYE4A6NLX3 237 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 RFX5P48382 616 aaPredicted RBP12.01□□□□□ -0.49
FOXN4-201ENST00000299162 KCNQ4P56696 695 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 STK11IPQ8N1F8 1099 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 TTC14Q96N46 770 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 TFIP11Q9UBB9 837 aaKnown RBP12.01□□□□□ -0.49
FOXN4-201ENST00000299162 KDM3BQ7LBC6 1761 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 KDM4FA0A1W2PPD8 638 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 SNAP23O00161 211 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 ADORA1P30542 326 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 HLFQ16534 295 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 COPRSQ9NQ92 184 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.01□□□□□ -0.49
FOXN4-201ENST00000299162 A0A1B0GUL7 405 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 IFIT1P09914 478 aaKnown RBP12.01□□□□□ -0.49
FOXN4-201ENST00000299162 PTMSP20962 102 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 NECTIN1Q15223 517 aa12.01□□□□□ -0.49
FOXN4-201ENST00000299162 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
FOXN4-201ENST00000299162 CAMTA1Q9Y6Y1 1673 aa12□□□□□ -0.49
FOXN4-201ENST00000299162 ZSCAN20P17040 1043 aaPredicted RBP12□□□□□ -0.49
FOXN4-201ENST00000299162 FOXO4P98177 505 aa12□□□□□ -0.49
FOXN4-201ENST00000299162 RNF20Q5VTR2 975 aa12□□□□□ -0.49
FOXN4-201ENST00000299162 KIF6Q6ZMV9 814 aa12□□□□□ -0.49
FOXN4-201ENST00000299162 LMO7Q8WWI1 1683 aa12□□□□□ -0.49
FOXN4-201ENST00000299162 CCT2P78371 535 aaKnown RBP12□□□□□ -0.49
FOXN4-201ENST00000299162 CEP126Q9P2H0 1117 aa12□□□□□ -0.49
FOXN4-201ENST00000299162 JAK2O60674 1132 aa11.99□□□□□ -0.49
FOXN4-201ENST00000299162 TTLL5Q6EMB2 1281 aa11.99□□□□□ -0.49
FOXN4-201ENST00000299162 SMIM5Q71RC9 77 aa11.99□□□□□ -0.49
FOXN4-201ENST00000299162 MAP4K1Q92918 833 aa11.99□□□□□ -0.49
FOXN4-201ENST00000299162 CARD10Q9BWT7 1032 aa11.99□□□□□ -0.49
FOXN4-201ENST00000299162 UTYO14607 1347 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms