RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 C20orf194Q5TEA3 1177 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 IQCGQ9H095 443 aaKnown RBP6.35□□□□□ -1.39
CPSF2-201ENST00000298875 ZNF213O14771 459 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 PRXQ9BXM0 1461 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 ZNF652Q9Y2D9 606 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 STARD3NLO95772 234 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 ARL1P40616 181 aaPredicted RBP6.35□□□□□ -1.39
CPSF2-201ENST00000298875 DAAM2Q86T65 1068 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 TBC1D5Q92609 795 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 RSPH14Q9UHP6 348 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 LIMCH1Q9UPQ0 1083 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 LUC7L2Q9Y383 392 aaKnown RBP6.35□□□□□ -1.39
CPSF2-201ENST00000298875 ZWINTO95229 277 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 SLC5A1P13866 664 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 CETN1Q12798 172 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 ANO6Q4KMQ2 910 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 IFIT3O14879 490 aaKnown RBP6.35□□□□□ -1.39
CPSF2-201ENST00000298875 KRT13P13646 458 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 HYPKQ9NX55 129 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 TRIM47Q96LD4 638 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 PANK2Q9BZ23 570 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 SSX2IPQ9Y2D8 614 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 PCF11O94913 1555 aaKnown RBP6.35□□□□□ -1.39
CPSF2-201ENST00000298875 ABCC10Q5T3U5 1492 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 LUC7L3O95232 432 aaKnown RBP6.34□□□□□ -1.39
CPSF2-201ENST00000298875 IFI16Q16666 785 aaKnown RBP6.34□□□□□ -1.39
CPSF2-201ENST00000298875 TMEM87AQ8NBN3 555 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 RASAL2Q9UJF2 1139 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 RGS22Q8NE09 1264 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC141Q6ZP82 1450 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 PRC1O43663 620 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 B4GALNT4Q76KP1 1039 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 ZPR1O75312 459 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 TRMT1LQ7Z2T5 733 aaKnown RBP6.34□□□□□ -1.39
CPSF2-201ENST00000298875 BICD1Q96G01 975 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 TMEM110-MUSTN1A8MSY1 372 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 PSMC4P43686 418 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 FERMT1Q9BQL6 677 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 METAP2P50579 478 aaKnown RBP eCLIP6.34□□□□□ -1.39
CPSF2-201ENST00000298875 ZBTB9Q96C00 473 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 NAP1L3Q99457 506 aaPredicted RBP6.34□□□□□ -1.39
CPSF2-201ENST00000298875 TCP11L1Q9NUJ3 509 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 PPFIA3O75145 1194 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 GNG11P61952 73 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 UBE2HP62256 183 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 TMEM67Q5HYA8 995 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 CTAGE9A4FU28 777 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 MAP3K12Q12852 859 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 GBP6Q6ZN66 633 aa6.34□□□□□ -1.39
CPSF2-201ENST00000298875 MSH6P52701 1360 aa6.34□□□□□ -1.4
CPSF2-201ENST00000298875 FBF1Q8TES7 1133 aa6.34□□□□□ -1.4
CPSF2-201ENST00000298875 TBC1D2Q9BYX2 928 aa6.34□□□□□ -1.4
CPSF2-201ENST00000298875 MKRN1Q9UHC7 482 aaKnown RBP6.34□□□□□ -1.4
CPSF2-201ENST00000298875 MAP3K1Q13233 1512 aa6.34□□□□□ -1.4
CPSF2-201ENST00000298875 NUP160Q12769 1436 aa6.34□□□□□ -1.4
CPSF2-201ENST00000298875 F6X3S4 739 aa6.34□□□□□ -1.4
CPSF2-201ENST00000298875 RAB11FIP4Q86YS3 637 aa6.34□□□□□ -1.4
CPSF2-201ENST00000298875 CCDC8Q9H0W5 538 aaPredicted RBP6.34□□□□□ -1.4
CPSF2-201ENST00000298875 CCDC63Q8NA47 563 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 ZNF526Q8TF50 670 aaPredicted RBP6.33□□□□□ -1.4
CPSF2-201ENST00000298875 ARAP1Q96P48 1450 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 FCHSD2O94868 740 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 STMN1P16949 149 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 IFIT5Q13325 482 aaKnown RBP6.33□□□□□ -1.4
CPSF2-201ENST00000298875 DUSP27Q5VZP5 1158 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 MICU3Q86XE3 530 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 IFT74Q96LB3 600 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 TMOD3Q9NYL9 352 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 TTLL12Q14166 644 aaPredicted RBP6.33□□□□□ -1.4
CPSF2-201ENST00000298875 ZNF354CQ86Y25 554 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 MICALL1Q8N3F8 863 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 ZNF830Q96NB3 372 aaPredicted RBP6.33□□□□□ -1.4
CPSF2-201ENST00000298875 RNF41Q9H4P4 317 aaPredicted RBP6.33□□□□□ -1.4
CPSF2-201ENST00000298875 ARFGAP3Q9NP61 516 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 STAT6P42226 847 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 C10orf67Q8IYJ2 551 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.33□□□□□ -1.4
CPSF2-201ENST00000298875 RAB3IL1Q8TBN0 382 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 THUMPD2Q9BTF0 503 aaKnown RBP6.33□□□□□ -1.4
CPSF2-201ENST00000298875 CFAP58Q5T655 872 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 TBC1D9Q6ZT07 1266 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 ZNF444Q8N0Y2 327 aaPredicted RBP6.33□□□□□ -1.4
CPSF2-201ENST00000298875 SELENOSQ9BQE4 189 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 SYNCQ9H7C4 482 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 CEP83Q9Y592 693 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 GOLIM4O00461 696 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 KANK3Q6NY19 840 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 GSTA5Q7RTV2 222 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 TTC12Q9H892 705 aaPredicted RBP6.33□□□□□ -1.4
CPSF2-201ENST00000298875 TFIP11Q9UBB9 837 aaKnown RBP6.33□□□□□ -1.4
CPSF2-201ENST00000298875 UHRF1BP1LA0JNW5 1464 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 OTUD6BQ8N6M0 293 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 VPS18Q9P253 973 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 CNPY2Q9Y2B0 182 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 SAMM50Q9Y512 469 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 UGGT2Q9NYU1 1516 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 UVSSAQ2YD98 709 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 RBM26Q5T8P6 1007 aaKnown RBP6.33□□□□□ -1.4
CPSF2-201ENST00000298875 CA8P35219 290 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 TMPOP42166 694 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms