RNA–Protein interactions for RNA: ENST00000298852.7

PSMC3-201, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-201ENST00000298852 CCDC152Q4G0S7 254 aa20.55■□□□□ 0.88
PSMC3-201ENST00000298852 CEP85Q6P2H3 762 aa20.55■□□□□ 0.88
PSMC3-201ENST00000298852 DLEC1Q9Y238 1755 aa20.55■□□□□ 0.88
PSMC3-201ENST00000298852 LMBR1LQ6UX01 489 aa20.54■□□□□ 0.88
PSMC3-201ENST00000298852 C1orf115Q9H7X2 142 aa20.54■□□□□ 0.88
PSMC3-201ENST00000298852 ATP8B2P98198 1209 aa20.53■□□□□ 0.88
PSMC3-201ENST00000298852 CD2APQ9Y5K6 639 aa20.53■□□□□ 0.88
PSMC3-201ENST00000298852 COL11A2P13942 1736 aaPredicted RBP20.52■□□□□ 0.88
PSMC3-201ENST00000298852 LRP5O75197 1615 aa20.52■□□□□ 0.88
PSMC3-201ENST00000298852 HMMRO75330 724 aa20.52■□□□□ 0.87
PSMC3-201ENST00000298852 HOXA10P31260 410 aaPredicted RBP20.52■□□□□ 0.87
PSMC3-201ENST00000298852 CCDC24Q8N4L8 307 aa20.52■□□□□ 0.87
PSMC3-201ENST00000298852 SSH3Q8TE77 659 aa20.52■□□□□ 0.87
PSMC3-201ENST00000298852 PCDHB15Q9Y5E8 787 aa20.52■□□□□ 0.87
PSMC3-201ENST00000298852 KIAA1551Q9HCM1 1747 aa20.51■□□□□ 0.87
PSMC3-201ENST00000298852 POLA2Q14181 598 aa20.51■□□□□ 0.87
PSMC3-201ENST00000298852 C3orf67Q6ZVT6 689 aa20.51■□□□□ 0.87
PSMC3-201ENST00000298852 SRGAP3O43295 1099 aa20.5■□□□□ 0.87
PSMC3-201ENST00000298852 SRGNP10124 158 aa20.5■□□□□ 0.87
PSMC3-201ENST00000298852 TGFB2P61812 414 aa20.49■□□□□ 0.87
PSMC3-201ENST00000298852 IFIT5Q13325 482 aaKnown RBP20.49■□□□□ 0.87
PSMC3-201ENST00000298852 CCDC57Q2TAC2 916 aa20.49■□□□□ 0.87
PSMC3-201ENST00000298852 FAM161AQ3B820 660 aa20.49■□□□□ 0.87
PSMC3-201ENST00000298852 SIRT2Q8IXJ6 389 aa20.49■□□□□ 0.87
PSMC3-201ENST00000298852 RPGRQ92834 1020 aaKnown RBP20.49■□□□□ 0.87
PSMC3-201ENST00000298852 GREM2Q9H772 168 aa20.49■□□□□ 0.87
PSMC3-201ENST00000298852 PNMA6EA0A0J9YXQ4 647 aa20.48■□□□□ 0.87
PSMC3-201ENST00000298852 H0YIN7 160 aa20.48■□□□□ 0.87
PSMC3-201ENST00000298852 NPR1P16066 1061 aa20.48■□□□□ 0.87
PSMC3-201ENST00000298852 HDAC1Q13547 482 aaPredicted RBP20.48■□□□□ 0.87
PSMC3-201ENST00000298852 CRAMP1Q96RY5 1269 aa20.48■□□□□ 0.87
PSMC3-201ENST00000298852 CDC5LQ99459 802 aaKnown RBP20.48■□□□□ 0.87
PSMC3-201ENST00000298852 FBXO3Q9UK99 471 aa20.48■□□□□ 0.87
PSMC3-201ENST00000298852 ANKRD18BA2A2Z9 1011 aa20.48■□□□□ 0.87
PSMC3-201ENST00000298852 ITGA6P23229 1130 aa20.48■□□□□ 0.87
PSMC3-201ENST00000298852 RFX5P48382 616 aaPredicted RBP20.48■□□□□ 0.87
PSMC3-201ENST00000298852 STYK1Q6J9G0 422 aa20.48■□□□□ 0.87
PSMC3-201ENST00000298852 DDX46Q7L014 1031 aaKnown RBP20.48■□□□□ 0.87
PSMC3-201ENST00000298852 MASTLQ96GX5 879 aa20.48■□□□□ 0.87
PSMC3-201ENST00000298852 COPRSQ9NQ92 184 aa20.48■□□□□ 0.87
PSMC3-201ENST00000298852 BRCA1P38398 1863 aaKnown RBP20.47■□□□□ 0.87
PSMC3-201ENST00000298852 TAF1P21675 1872 aa20.47■□□□□ 0.87
PSMC3-201ENST00000298852 RBM17Q96I25 401 aaKnown RBP20.47■□□□□ 0.87
PSMC3-201ENST00000298852 CHMP3Q9Y3E7 222 aa20.47■□□□□ 0.87
PSMC3-201ENST00000298852 C2CD5Q86YS7 1000 aa20.46■□□□□ 0.87
PSMC3-201ENST00000298852 ALDH1B1P30837 517 aa20.45■□□□□ 0.86
PSMC3-201ENST00000298852 PTPN12Q05209 780 aaKnown RBP20.45■□□□□ 0.86
PSMC3-201ENST00000298852 RWDD1Q9H446 243 aaPredicted RBP20.45■□□□□ 0.86
PSMC3-201ENST00000298852 NOP58Q9Y2X3 529 aaKnown RBP20.45■□□□□ 0.86
PSMC3-201ENST00000298852 GRAPQ13588 217 aa20.44■□□□□ 0.86
PSMC3-201ENST00000298852 TMC4Q7Z404 712 aa20.44■□□□□ 0.86
PSMC3-201ENST00000298852 GRAPLQ8TC17 118 aaPredicted RBP20.44■□□□□ 0.86
PSMC3-201ENST00000298852 PPP4R2Q9NY27 417 aa20.44■□□□□ 0.86
PSMC3-201ENST00000298852 SPEF2Q9C093 1822 aa20.44■□□□□ 0.86
PSMC3-201ENST00000298852 CNKSR1Q969H4 720 aa20.43■□□□□ 0.86
PSMC3-201ENST00000298852 CCDC85AQ96PX6 553 aaPredicted RBP20.43■□□□□ 0.86
PSMC3-201ENST00000298852 SEC31BQ9NQW1 1179 aa20.43■□□□□ 0.86
PSMC3-201ENST00000298852 BBOX1O75936 387 aa20.43■□□□□ 0.86
PSMC3-201ENST00000298852 CIAO1O76071 339 aa20.43■□□□□ 0.86
PSMC3-201ENST00000298852 RPS8P62241 208 aaKnown RBP20.43■□□□□ 0.86
PSMC3-201ENST00000298852 HSP90AB4PQ58FF6 505 aa20.43■□□□□ 0.86
PSMC3-201ENST00000298852 TAF7LQ5H9L4 462 aa20.43■□□□□ 0.86
PSMC3-201ENST00000298852 ANKRD18AQ8IVF6 992 aa20.43■□□□□ 0.86
PSMC3-201ENST00000298852 LRRC37AA6NMS7 1700 aa20.42■□□□□ 0.86
PSMC3-201ENST00000298852 IGHMBP2P38935 993 aaKnown RBP20.42■□□□□ 0.86
PSMC3-201ENST00000298852 DCTPP1Q9H773 170 aa20.42■□□□□ 0.86
PSMC3-201ENST00000298852 BSDC1Q9NW68 430 aaPredicted RBP20.42■□□□□ 0.86
PSMC3-201ENST00000298852 CACNA1SQ13698 1873 aa20.42■□□□□ 0.86
PSMC3-201ENST00000298852 COL4A1P02462 1669 aa20.41■□□□□ 0.86
PSMC3-201ENST00000298852 DPEP1P16444 411 aa20.41■□□□□ 0.86
PSMC3-201ENST00000298852 KCNA3P22001 575 aa20.41■□□□□ 0.86
PSMC3-201ENST00000298852 CHRNA5P30532 468 aa20.41■□□□□ 0.86
PSMC3-201ENST00000298852 CELF1Q92879 486 aaKnown RBP20.41■□□□□ 0.86
PSMC3-201ENST00000298852 MPHOSPH8Q99549 860 aa20.41■□□□□ 0.86
PSMC3-201ENST00000298852 PPP1R1BQ9UD71 204 aaPredicted RBP20.41■□□□□ 0.86
PSMC3-201ENST00000298852 SLX4Q8IY92 1834 aa20.4■□□□□ 0.86
PSMC3-201ENST00000298852 EYA2O00167 538 aa20.4■□□□□ 0.86
PSMC3-201ENST00000298852 LDHAL6AQ6ZMR3 332 aa20.4■□□□□ 0.86
PSMC3-201ENST00000298852 GCC1Q96CN9 775 aa20.4■□□□□ 0.86
PSMC3-201ENST00000298852 A0A1B0GUL6 1792 aa20.39■□□□□ 0.86
PSMC3-201ENST00000298852 SURF6O75683 361 aaKnown RBP20.39■□□□□ 0.85
PSMC3-201ENST00000298852 FHDC1Q9C0D6 1143 aaPredicted RBP20.39■□□□□ 0.85
PSMC3-201ENST00000298852 SRCAPQ6ZRS2 3230 aa20.38■□□□□ 0.85
PSMC3-201ENST00000298852 A0A0G2JLW4 131 aa20.38■□□□□ 0.85
PSMC3-201ENST00000298852 ERC1Q8IUD2 1116 aa20.38■□□□□ 0.85
PSMC3-201ENST00000298852 SMC5Q8IY18 1101 aa20.38■□□□□ 0.85
PSMC3-201ENST00000298852 KLHDC4Q8TBB5 520 aa20.38■□□□□ 0.85
PSMC3-201ENST00000298852 ZNF622Q969S3 477 aaKnown RBP eCLIP20.38■□□□□ 0.854e-9■□□□□ 9.9
PSMC3-201ENST00000298852 ZNF594Q96JF6 807 aaPredicted RBP20.38■□□□□ 0.85
PSMC3-201ENST00000298852 CCDC136Q96JN2 1154 aa20.38■□□□□ 0.85
PSMC3-201ENST00000298852 PIM2Q9P1W9 311 aa20.38■□□□□ 0.85
PSMC3-201ENST00000298852 PA2G4Q9UQ80 394 aaKnown RBP20.38■□□□□ 0.85
PSMC3-201ENST00000298852 RIPOR2Q9Y4F9 1068 aa20.38■□□□□ 0.85
PSMC3-201ENST00000298852 RAB11FIP3O75154 756 aa20.37■□□□□ 0.85
PSMC3-201ENST00000298852 IL15P40933 162 aaPredicted RBP20.37■□□□□ 0.85
PSMC3-201ENST00000298852 G3BP1Q13283 466 aaKnown RBP eCLIP20.37■□□□□ 0.859e-7■■■■□ 23.6
PSMC3-201ENST00000298852 TTLL6Q8N841 843 aa20.37■□□□□ 0.85
PSMC3-201ENST00000298852 ARFGEF1Q9Y6D6 1849 aa20.37■□□□□ 0.85
PSMC3-201ENST00000298852 MROH5Q6ZUA9 1318 aa20.37■□□□□ 0.85
PSMC3-201ENST00000298852 IGHDP01880 384 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms