RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 UBAP1LF5GYI3 381 aa23.69■■□□□ 1.38
NFIL3-201ENST00000297689 TNNI3KQ59H18 835 aa23.69■■□□□ 1.38
NFIL3-201ENST00000297689 FPGT-TNNI3KV9GXZ4 949 aa23.69■■□□□ 1.38
NFIL3-201ENST00000297689 F13A1P00488 732 aa23.68■■□□□ 1.38
NFIL3-201ENST00000297689 COL9A3Q14050 684 aaPredicted RBP23.68■■□□□ 1.38
NFIL3-201ENST00000297689 FSD1Q9BTV5 496 aa23.68■■□□□ 1.38
NFIL3-201ENST00000297689 ME3Q16798 604 aa23.68■■□□□ 1.38
NFIL3-201ENST00000297689 USPL1Q5W0Q7 1092 aa23.68■■□□□ 1.38
NFIL3-201ENST00000297689 UBE3BQ7Z3V4 1068 aa23.68■■□□□ 1.38
NFIL3-201ENST00000297689 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.68■■□□□ 1.38
NFIL3-201ENST00000297689 NBPF26B4DH59 902 aa23.67■■□□□ 1.38
NFIL3-201ENST00000297689 NBPF14Q5TI25 921 aa23.67■■□□□ 1.38
NFIL3-201ENST00000297689 NBPF10Q6P3W6 841 aaKnown RBP23.67■■□□□ 1.38
NFIL3-201ENST00000297689 CCDC83Q8IWF9 413 aa23.67■■□□□ 1.38
NFIL3-201ENST00000297689 NBPF15Q8N660 670 aa23.67■■□□□ 1.38
NFIL3-201ENST00000297689 JARID2Q92833 1246 aaPredicted RBP23.67■■□□□ 1.38
NFIL3-201ENST00000297689 BTG4Q9NY30 223 aa23.67■■□□□ 1.38
NFIL3-201ENST00000297689 MTMR6Q9Y217 621 aa23.67■■□□□ 1.38
NFIL3-201ENST00000297689 RFX7Q2KHR2 1363 aa23.67■■□□□ 1.38
NFIL3-201ENST00000297689 TFCP2Q12800 502 aa23.66■■□□□ 1.38
NFIL3-201ENST00000297689 SYAP1Q96A49 352 aaPredicted RBP23.66■■□□□ 1.38
NFIL3-201ENST00000297689 TNS2Q63HR2 1409 aa23.66■■□□□ 1.38
NFIL3-201ENST00000297689 A0A087WZG4 1122 aa23.66■■□□□ 1.38
NFIL3-201ENST00000297689 H7C1W4 665 aa23.66■■□□□ 1.38
NFIL3-201ENST00000297689 TAF5LO75529 589 aa23.66■■□□□ 1.38
NFIL3-201ENST00000297689 GJB2P29033 226 aa23.66■■□□□ 1.38
NFIL3-201ENST00000297689 ZNF589Q86UQ0 364 aaPredicted RBP23.66■■□□□ 1.38
NFIL3-201ENST00000297689 TPCN1Q9ULQ1 816 aa23.66■■□□□ 1.38
NFIL3-201ENST00000297689 COL14A1Q05707 1796 aaKnown RBP23.65■■□□□ 1.38
NFIL3-201ENST00000297689 ATP5J2-PTCD1G3V325 749 aa23.65■■□□□ 1.38
NFIL3-201ENST00000297689 PTCD1O75127 700 aaKnown RBP23.65■■□□□ 1.38
NFIL3-201ENST00000297689 PSMA5P28066 241 aa23.65■■□□□ 1.38
NFIL3-201ENST00000297689 FOXD4L6Q3SYB3 417 aaPredicted RBP23.65■■□□□ 1.38
NFIL3-201ENST00000297689 FOXD4L3Q6VB84 417 aaPredicted RBP23.65■■□□□ 1.38
NFIL3-201ENST00000297689 ZSCAN30Q86W11 494 aa23.65■■□□□ 1.38
NFIL3-201ENST00000297689 CNPY2Q9Y2B0 182 aa23.65■■□□□ 1.38
NFIL3-201ENST00000297689 FOXO4P98177 505 aa23.64■■□□□ 1.37
NFIL3-201ENST00000297689 EDC3Q96F86 508 aaKnown RBP23.64■■□□□ 1.37
NFIL3-201ENST00000297689 TAF6LQ9Y6J9 622 aa23.64■■□□□ 1.37
NFIL3-201ENST00000297689 NUP188Q5SRE5 1749 aa23.63■■□□□ 1.37
NFIL3-201ENST00000297689 CERKQ8TCT0 537 aa23.63■■□□□ 1.37
NFIL3-201ENST00000297689 HMG20BQ9P0W2 317 aa23.63■■□□□ 1.37
NFIL3-201ENST00000297689 ATP6V1DQ9Y5K8 247 aa23.63■■□□□ 1.37
NFIL3-201ENST00000297689 RNF20Q5VTR2 975 aa23.63■■□□□ 1.37
NFIL3-201ENST00000297689 RPS6KB1P23443 525 aa23.61■■□□□ 1.37
NFIL3-201ENST00000297689 KCNJ4P48050 445 aa23.61■■□□□ 1.37
NFIL3-201ENST00000297689 UBE2HP62256 183 aa23.61■■□□□ 1.37
NFIL3-201ENST00000297689 KLHL34Q8N239 644 aa23.61■■□□□ 1.37
NFIL3-201ENST00000297689 HAUS7Q99871 368 aa23.61■■□□□ 1.37
NFIL3-201ENST00000297689 TSPY26PQ9H489 355 aa23.61■■□□□ 1.37
NFIL3-201ENST00000297689 DISP2A7MBM2 1401 aa23.61■■□□□ 1.37
NFIL3-201ENST00000297689 PDIA4P13667 645 aaKnown RBP23.61■■□□□ 1.37
NFIL3-201ENST00000297689 DBNDD2Q9BQY9 259 aa23.61■■□□□ 1.37
NFIL3-201ENST00000297689 TJP1Q07157 1748 aa23.6■■□□□ 1.37
NFIL3-201ENST00000297689 TOB2Q14106 344 aaPredicted RBP23.6■■□□□ 1.37
NFIL3-201ENST00000297689 LMBR1LQ6UX01 489 aa23.6■■□□□ 1.37
NFIL3-201ENST00000297689 PHF14O94880 888 aa23.6■■□□□ 1.37
NFIL3-201ENST00000297689 A1BGP04217 495 aa23.6■■□□□ 1.37
NFIL3-201ENST00000297689 ANKRD1Q15327 319 aa23.6■■□□□ 1.37
NFIL3-201ENST00000297689 BLOC1S2Q6QNY1 142 aa23.6■■□□□ 1.37
NFIL3-201ENST00000297689 ATG9AQ7Z3C6 839 aa23.6■■□□□ 1.37
NFIL3-201ENST00000297689 NECAB1Q8N987 351 aa23.6■■□□□ 1.37
NFIL3-201ENST00000297689 ZNF609O15014 1411 aa23.59■■□□□ 1.37
NFIL3-201ENST00000297689 TTLL7Q6ZT98 887 aa23.58■■□□□ 1.37
NFIL3-201ENST00000297689 GPR108Q9NPR9 543 aa23.58■■□□□ 1.37
NFIL3-201ENST00000297689 NOL7Q9UMY1 257 aaKnown RBP23.58■■□□□ 1.37
NFIL3-201ENST00000297689 CCDC183Q5T5S1 534 aa23.58■■□□□ 1.36
NFIL3-201ENST00000297689 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.58■■□□□ 1.36
NFIL3-201ENST00000297689 TICAM2Q86XR7 235 aa23.57■■□□□ 1.36
NFIL3-201ENST00000297689 ITGB4P16144 1822 aa23.57■■□□□ 1.36
NFIL3-201ENST00000297689 PLCH1Q4KWH8 1693 aa23.56■■□□□ 1.36
NFIL3-201ENST00000297689 DNM1Q05193 864 aaKnown RBP23.56■■□□□ 1.36
NFIL3-201ENST00000297689 TMOD3Q9NYL9 352 aa23.56■■□□□ 1.36
NFIL3-201ENST00000297689 DTNBO60941 627 aa23.55■■□□□ 1.36
NFIL3-201ENST00000297689 CWC25Q9NXE8 425 aaPredicted RBP23.55■■□□□ 1.36
NFIL3-201ENST00000297689 NDUFB9Q9Y6M9 179 aa23.55■■□□□ 1.36
NFIL3-201ENST00000297689 LETM1O95202 739 aaPredicted RBP23.55■■□□□ 1.36
NFIL3-201ENST00000297689 KRT32Q14532 448 aa23.55■■□□□ 1.36
NFIL3-201ENST00000297689 KBTBD3Q8NAB2 608 aa23.55■■□□□ 1.36
NFIL3-201ENST00000297689 PIGBQ92521 554 aa23.55■■□□□ 1.36
NFIL3-201ENST00000297689 PALLDQ8WX93 1383 aa23.54■■□□□ 1.36
NFIL3-201ENST00000297689 CHGBP05060 677 aa23.54■■□□□ 1.36
NFIL3-201ENST00000297689 CCDC191Q8NCU4 936 aa23.54■■□□□ 1.36
NFIL3-201ENST00000297689 RNF214Q8ND24 703 aa23.54■■□□□ 1.36
NFIL3-201ENST00000297689 ASAP1Q9ULH1 1129 aa23.54■■□□□ 1.36
NFIL3-201ENST00000297689 WNK3Q9BYP7 1800 aa23.54■■□□□ 1.36
NFIL3-201ENST00000297689 MCMDC2Q4G0Z9 681 aa23.53■■□□□ 1.36
NFIL3-201ENST00000297689 FAM184AQ8NB25 1140 aa23.53■■□□□ 1.36
NFIL3-201ENST00000297689 TCEANC2Q96MN5 208 aa23.53■■□□□ 1.36
NFIL3-201ENST00000297689 SH3TC1Q8TE82 1336 aa23.53■■□□□ 1.36
NFIL3-201ENST00000297689 FIBPO43427 364 aa23.53■■□□□ 1.36
NFIL3-201ENST00000297689 CSPP1Q1MSJ5 1256 aa23.53■■□□□ 1.36
NFIL3-201ENST00000297689 UVSSAQ2YD98 709 aa23.53■■□□□ 1.36
NFIL3-201ENST00000297689 LARP1BQ659C4 914 aaKnown RBP23.53■■□□□ 1.36
NFIL3-201ENST00000297689 SEC62Q99442 399 aaKnown RBP23.53■■□□□ 1.36
NFIL3-201ENST00000297689 FUCA2Q9BTY2 467 aa23.53■■□□□ 1.36
NFIL3-201ENST00000297689 ATG3Q9NT62 314 aa23.53■■□□□ 1.36
NFIL3-201ENST00000297689 U3KPZ7 1027 aaPredicted RBP23.53■■□□□ 1.36
NFIL3-201ENST00000297689 ZNF500O60304 480 aaPredicted RBP23.52■■□□□ 1.35
NFIL3-201ENST00000297689 PDCP20941 246 aa23.52■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms