RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 CDC37L1Q7L3B6 337 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 ANKRD7Q92527 254 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 DDX41Q9UJV9 622 aaKnown RBP17.47■□□□□ 0.39
SPIDR-201ENST00000297423 GNAI3P08754 354 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 CHRNA2Q15822 529 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 CHL1O00533 1208 aa17.46■□□□□ 0.39
SPIDR-201ENST00000297423 ARHGAP29Q52LW3 1261 aa17.46■□□□□ 0.39
SPIDR-201ENST00000297423 IFIT2P09913 472 aaKnown RBP17.46■□□□□ 0.39
SPIDR-201ENST00000297423 CCT4P50991 539 aaKnown RBP17.46■□□□□ 0.39
SPIDR-201ENST00000297423 CCDC73Q6ZRK6 1079 aa17.46■□□□□ 0.39
SPIDR-201ENST00000297423 PRDM11Q9NQV5 511 aa17.46■□□□□ 0.39
SPIDR-201ENST00000297423 NWD1Q149M9 1564 aa17.46■□□□□ 0.39
SPIDR-201ENST00000297423 AMOTQ4VCS5 1084 aa17.46■□□□□ 0.38
SPIDR-201ENST00000297423 MRVI1Q9Y6F6 885 aa17.46■□□□□ 0.38
SPIDR-201ENST00000297423 ANAPC15P60006 121 aa17.45■□□□□ 0.38
SPIDR-201ENST00000297423 DNAJC2Q99543 621 aaKnown RBP17.45■□□□□ 0.38
SPIDR-201ENST00000297423 SLU7O95391 586 aaKnown RBP17.45■□□□□ 0.38
SPIDR-201ENST00000297423 SLFN14P0C7P3 912 aa17.45■□□□□ 0.38
SPIDR-201ENST00000297423 MST1RQ04912 1400 aa17.45■□□□□ 0.38
SPIDR-201ENST00000297423 TMCO3Q6UWJ1 677 aa17.45■□□□□ 0.38
SPIDR-201ENST00000297423 SIL1Q9H173 461 aa17.45■□□□□ 0.38
SPIDR-201ENST00000297423 DCCP43146 1447 aa17.45■□□□□ 0.38
SPIDR-201ENST00000297423 SNW1Q13573 536 aaKnown RBP17.45■□□□□ 0.38
SPIDR-201ENST00000297423 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
SPIDR-201ENST00000297423 RUFY2Q8WXA3 655 aa17.45■□□□□ 0.38
SPIDR-201ENST00000297423 LRRC2Q9BYS8 371 aa17.45■□□□□ 0.38
SPIDR-201ENST00000297423 ARGLU1Q9NWB6 273 aaPredicted RBP17.45■□□□□ 0.38
SPIDR-201ENST00000297423 CCDC144BQ3MJ40 725 aa17.44■□□□□ 0.38
SPIDR-201ENST00000297423 CCDC144CPQ8IYA2 1237 aa17.44■□□□□ 0.38
SPIDR-201ENST00000297423 KDRP35968 1356 aa17.44■□□□□ 0.38
SPIDR-201ENST00000297423 MAP3K5Q99683 1374 aa17.44■□□□□ 0.38
SPIDR-201ENST00000297423 KINO60870 393 aaKnown RBP17.44■□□□□ 0.38
SPIDR-201ENST00000297423 TOMM22Q9NS69 142 aa17.44■□□□□ 0.38
SPIDR-201ENST00000297423 MTMR6Q9Y217 621 aa17.44■□□□□ 0.38
SPIDR-201ENST00000297423 ME1P48163 572 aa17.44■□□□□ 0.38
SPIDR-201ENST00000297423 BMS1Q14692 1282 aaKnown RBP17.44■□□□□ 0.38
SPIDR-201ENST00000297423 NR1I2O75469 434 aa17.43■□□□□ 0.38
SPIDR-201ENST00000297423 TATP17735 454 aaPredicted RBP17.43■□□□□ 0.38
SPIDR-201ENST00000297423 ADCK5Q3MIX3 580 aa17.43■□□□□ 0.38
SPIDR-201ENST00000297423 HSP90AA4PQ58FG1 418 aa17.43■□□□□ 0.38
SPIDR-201ENST00000297423 BRINP3Q76B58 766 aa17.43■□□□□ 0.38
SPIDR-201ENST00000297423 STK11IPQ8N1F8 1099 aa17.43■□□□□ 0.38
SPIDR-201ENST00000297423 DNAI1Q9UI46 699 aa17.43■□□□□ 0.38
SPIDR-201ENST00000297423 TMC6Q7Z403 805 aa17.43■□□□□ 0.38
SPIDR-201ENST00000297423 HNRNPH2P55795 449 aaKnown RBP17.43■□□□□ 0.38
SPIDR-201ENST00000297423 PDILTQ8N807 584 aa17.43■□□□□ 0.38
SPIDR-201ENST00000297423 ANXA1P04083 346 aa17.42■□□□□ 0.38
SPIDR-201ENST00000297423 GPS2Q13227 327 aa17.42■□□□□ 0.38
SPIDR-201ENST00000297423 PTPN21Q16825 1174 aa17.42■□□□□ 0.38
SPIDR-201ENST00000297423 TTLL5Q6EMB2 1281 aa17.42■□□□□ 0.38
SPIDR-201ENST00000297423 PPP1R42Q7Z4L9 355 aa17.42■□□□□ 0.38
SPIDR-201ENST00000297423 PEAK1Q9H792 1746 aa17.42■□□□□ 0.38
SPIDR-201ENST00000297423 LMAN1P49257 510 aa17.42■□□□□ 0.38
SPIDR-201ENST00000297423 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
SPIDR-201ENST00000297423 IPO4Q8TEX9 1081 aaKnown RBP17.42■□□□□ 0.38
SPIDR-201ENST00000297423 BLOC1S2Q6QNY1 142 aa17.41■□□□□ 0.38
SPIDR-201ENST00000297423 MPRIPQ6WCQ1 1025 aa17.41■□□□□ 0.38
SPIDR-201ENST00000297423 EVA1CP58658 441 aa17.41■□□□□ 0.38
SPIDR-201ENST00000297423 LARP1Q6PKG0 1096 aaKnown RBP17.41■□□□□ 0.38
SPIDR-201ENST00000297423 KRBA2Q6ZNG9 492 aa17.41■□□□□ 0.38
SPIDR-201ENST00000297423 AOPEPQ8N6M6 819 aa17.41■□□□□ 0.38
SPIDR-201ENST00000297423 LMTK3Q96Q04 1460 aa17.41■□□□□ 0.38
SPIDR-201ENST00000297423 PDCP20941 246 aa17.4■□□□□ 0.38
SPIDR-201ENST00000297423 HSPA4P34932 840 aa17.4■□□□□ 0.38
SPIDR-201ENST00000297423 FLIIQ13045 1269 aa17.4■□□□□ 0.38
SPIDR-201ENST00000297423 FSD1Q9BTV5 496 aa17.4■□□□□ 0.38
SPIDR-201ENST00000297423 ZCCHC17Q9NP64 241 aaKnown RBP17.4■□□□□ 0.38
SPIDR-201ENST00000297423 RAD50Q92878 1312 aa17.4■□□□□ 0.38
SPIDR-201ENST00000297423 ME3Q16798 604 aa17.4■□□□□ 0.38
SPIDR-201ENST00000297423 CCDC30Q5VVM6 783 aa17.4■□□□□ 0.38
SPIDR-201ENST00000297423 GYS2P54840 703 aa17.4■□□□□ 0.38
SPIDR-201ENST00000297423 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
SPIDR-201ENST00000297423 AXIN2Q9Y2T1 843 aa17.4■□□□□ 0.38
SPIDR-201ENST00000297423 SPATA31A3Q5VYP0 1347 aa17.4■□□□□ 0.38
SPIDR-201ENST00000297423 CREBRFQ8IUR6 639 aa17.39■□□□□ 0.38
SPIDR-201ENST00000297423 SCAND2PQ9GZW5 306 aaPredicted RBP17.39■□□□□ 0.38
SPIDR-201ENST00000297423 CTIFO43310 598 aaKnown RBP17.39■□□□□ 0.37
SPIDR-201ENST00000297423 SEC31AO94979 1220 aaKnown RBP17.39■□□□□ 0.37
SPIDR-201ENST00000297423 AKAP4Q5JQC9 854 aa17.39■□□□□ 0.37
SPIDR-201ENST00000297423 IL17REQ8NFR9 667 aa17.39■□□□□ 0.37
SPIDR-201ENST00000297423 PTH1RQ03431 593 aa17.39■□□□□ 0.37
SPIDR-201ENST00000297423 EPC1Q9H2F5 836 aa17.39■□□□□ 0.37
SPIDR-201ENST00000297423 C9orf78Q9NZ63 289 aaPredicted RBP17.39■□□□□ 0.37
SPIDR-201ENST00000297423 DDX19AQ9NUU7 478 aaKnown RBP17.38■□□□□ 0.37
SPIDR-201ENST00000297423 SFPQP23246 707 aaKnown RBP eCLIP17.38■□□□□ 0.37
SPIDR-201ENST00000297423 TOM1L2Q6ZVM7 507 aa17.38■□□□□ 0.37
SPIDR-201ENST00000297423 CCDC191Q8NCU4 936 aa17.38■□□□□ 0.37
SPIDR-201ENST00000297423 CCDC8Q9H0W5 538 aaPredicted RBP17.38■□□□□ 0.37
SPIDR-201ENST00000297423 RSPH14Q9UHP6 348 aa17.38■□□□□ 0.37
SPIDR-201ENST00000297423 RHPN1Q8TCX5 695 aa17.38■□□□□ 0.37
SPIDR-201ENST00000297423 GPATCH3Q96I76 525 aa17.38■□□□□ 0.37
SPIDR-201ENST00000297423 BOLA2Q9H3K6 86 aa17.38■□□□□ 0.37
SPIDR-201ENST00000297423 LRRC8AQ8IWT6 810 aa17.38■□□□□ 0.37
SPIDR-201ENST00000297423 ERO1AQ96HE7 468 aa17.38■□□□□ 0.37
SPIDR-201ENST00000297423 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
SPIDR-201ENST00000297423 TNS3Q68CZ2 1445 aa17.37■□□□□ 0.37
SPIDR-201ENST00000297423 TPM4P67936 248 aa17.37■□□□□ 0.37
SPIDR-201ENST00000297423 CCAR1Q8IX12 1150 aaKnown RBP17.37■□□□□ 0.37
SPIDR-201ENST00000297423 ZSCAN31Q96LW9 406 aaPredicted RBP17.37■□□□□ 0.37
SPIDR-201ENST00000297423 STRN4Q9NRL3 753 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 1323.6 ms