RNA–Protein interactions for RNA: ENST00000296140.3

CCR1-201, Transcript of C-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR1, Length 2,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1-201ENST00000296140 ALDH1L1O75891 902 aa11.43□□□□□ -0.58
CCR1-201ENST00000296140 G3BP1Q13283 466 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCR1-201ENST00000296140 SLC39A6Q13433 755 aa11.43□□□□□ -0.58
CCR1-201ENST00000296140 PPP4R3BQ5MIZ7 849 aa11.43□□□□□ -0.58
CCR1-201ENST00000296140 FTOQ9C0B1 505 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCR1-201ENST00000296140 DNAJC25Q9H1X3 360 aa11.43□□□□□ -0.58
CCR1-201ENST00000296140 CEBPZQ03701 1054 aaKnown RBP11.43□□□□□ -0.58
CCR1-201ENST00000296140 SLFNL1Q499Z3 407 aa11.43□□□□□ -0.58
CCR1-201ENST00000296140 ERC1Q8IUD2 1116 aa11.43□□□□□ -0.58
CCR1-201ENST00000296140 ZHX1Q9UKY1 873 aaPredicted RBP11.43□□□□□ -0.58
CCR1-201ENST00000296140 CCDC9Q9Y3X0 531 aaKnown RBP11.43□□□□□ -0.58
CCR1-201ENST00000296140 ARHGAP23Q9P227 1491 aa11.43□□□□□ -0.58
CCR1-201ENST00000296140 MYL6BP14649 208 aa11.42□□□□□ -0.58
CCR1-201ENST00000296140 C16orf45Q96MC5 204 aaPredicted RBP11.42□□□□□ -0.58
CCR1-201ENST00000296140 ANKARQ7Z5J8 1434 aa11.42□□□□□ -0.58
CCR1-201ENST00000296140 NFAT5O94916 1531 aa11.42□□□□□ -0.58
CCR1-201ENST00000296140 NAA30Q147X3 362 aaPredicted RBP11.42□□□□□ -0.58
CCR1-201ENST00000296140 PDIA6Q15084 440 aa11.42□□□□□ -0.58
CCR1-201ENST00000296140 SMAP1Q8IYB5 467 aaPredicted RBP11.42□□□□□ -0.58
CCR1-201ENST00000296140 LINS1Q8NG48 757 aa11.42□□□□□ -0.58
CCR1-201ENST00000296140 BRF1Q92994 677 aa11.42□□□□□ -0.58
CCR1-201ENST00000296140 ELP1O95163 1332 aa11.41□□□□□ -0.58
CCR1-201ENST00000296140 TAF5LO75529 589 aa11.41□□□□□ -0.58
CCR1-201ENST00000296140 PSMA5P28066 241 aa11.41□□□□□ -0.58
CCR1-201ENST00000296140 ARID5BQ14865 1188 aa11.41□□□□□ -0.58
CCR1-201ENST00000296140 CCDC144BQ3MJ40 725 aa11.41□□□□□ -0.58
CCR1-201ENST00000296140 CCDC144CPQ8IYA2 1237 aa11.41□□□□□ -0.58
CCR1-201ENST00000296140 BICD2Q8TD16 824 aa11.41□□□□□ -0.58
CCR1-201ENST00000296140 SLIT1O75093 1534 aa11.41□□□□□ -0.58
CCR1-201ENST00000296140 GOLGA6L4A6NEF3 574 aa11.41□□□□□ -0.58
CCR1-201ENST00000296140 U2AF2P26368 475 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCR1-201ENST00000296140 PLEKHO1Q53GL0 409 aaPredicted RBP11.41□□□□□ -0.58
CCR1-201ENST00000296140 DRC7Q8IY82 874 aa11.41□□□□□ -0.58
CCR1-201ENST00000296140 TRIM5Q9C035 493 aa11.41□□□□□ -0.58
CCR1-201ENST00000296140 ZSCAN20P17040 1043 aaPredicted RBP11.4□□□□□ -0.58
CCR1-201ENST00000296140 C1orf141Q5JVX7 400 aa11.4□□□□□ -0.58
CCR1-201ENST00000296140 CLSTN2Q9H4D0 955 aa11.4□□□□□ -0.58
CCR1-201ENST00000296140 SNRKQ9NRH2 765 aa11.4□□□□□ -0.58
CCR1-201ENST00000296140 DBNLQ9UJU6 430 aaKnown RBP11.4□□□□□ -0.58
CCR1-201ENST00000296140 A0A0G2JLW4 131 aa11.4□□□□□ -0.58
CCR1-201ENST00000296140 ZNF75DP51815 510 aa11.4□□□□□ -0.58
CCR1-201ENST00000296140 RESTQ13127 1097 aa11.4□□□□□ -0.58
CCR1-201ENST00000296140 ESCO1Q5FWF5 840 aa11.4□□□□□ -0.58
CCR1-201ENST00000296140 HEG1Q9ULI3 1381 aa11.4□□□□□ -0.58
CCR1-201ENST00000296140 NPHP3Q7Z494 1330 aa11.4□□□□□ -0.59
CCR1-201ENST00000296140 PDCP20941 246 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 LMOD2Q6P5Q4 547 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 Q6ZUG5 572 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 RIC3Q7Z5B4 369 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 CACTINQ8WUQ7 758 aaKnown RBP11.39□□□□□ -0.59
CCR1-201ENST00000296140 ERCC4Q92889 916 aaPredicted RBP11.39□□□□□ -0.59
CCR1-201ENST00000296140 DNAJC2Q99543 621 aaKnown RBP11.39□□□□□ -0.59
CCR1-201ENST00000296140 AXIN2Q9Y2T1 843 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 KIF13AQ9H1H9 1805 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 GOLGA6L6A8MZA4 724 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 ZNF165P49910 485 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 RNF20Q5VTR2 975 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 ZSCAN25Q6NSZ9 544 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 RBM43Q6ZSC3 357 aaKnown RBP11.39□□□□□ -0.59
CCR1-201ENST00000296140 C11orf57Q6ZUT1 292 aaPredicted RBP11.39□□□□□ -0.59
CCR1-201ENST00000296140 PLA2G4DQ86XP0 818 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 PDCL2Q8N4E4 241 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 GTF3C6Q969F1 213 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 MYD88Q99836 296 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 SCAND2PQ9GZW5 306 aaPredicted RBP11.39□□□□□ -0.59
CCR1-201ENST00000296140 ZNF609O15014 1411 aa11.39□□□□□ -0.59
CCR1-201ENST00000296140 HIP1O00291 1037 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 CYP21A2P08686 494 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 HSP90B1P14625 803 aaKnown RBP11.38□□□□□ -0.59
CCR1-201ENST00000296140 PSME1Q06323 249 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 TFCP2Q12800 502 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 STOX1Q6ZVD7 989 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 DDX46Q7L014 1031 aaKnown RBP11.38□□□□□ -0.59
CCR1-201ENST00000296140 DDX19AQ9NUU7 478 aaKnown RBP11.38□□□□□ -0.59
CCR1-201ENST00000296140 USP16Q9Y5T5 823 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 LMO7Q8WWI1 1683 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 CHD2O14647 1828 aaKnown RBP11.38□□□□□ -0.59
CCR1-201ENST00000296140 UTYO14607 1347 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 JCADQ9P266 1359 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 USP54Q70EL1 1684 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 NEURL1BA8MQ27 555 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 IGSF3O75054 1194 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 SCRN1Q12765 414 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 TDRD7Q8NHU6 1098 aaKnown RBP11.38□□□□□ -0.59
CCR1-201ENST00000296140 ANKRD24Q8TF21 1146 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 XAGE3Q8WTP9 111 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 DBNDD2Q9BQY9 259 aa11.38□□□□□ -0.59
CCR1-201ENST00000296140 DDX21Q9NR30 783 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCR1-201ENST00000296140 USP27XA6NNY8 438 aa11.37□□□□□ -0.59
CCR1-201ENST00000296140 NCBP1Q09161 790 aaKnown RBP11.37□□□□□ -0.59
CCR1-201ENST00000296140 ANKRD1Q15327 319 aa11.37□□□□□ -0.59
CCR1-201ENST00000296140 THEMISQ8N1K5 641 aaPredicted RBP11.37□□□□□ -0.59
CCR1-201ENST00000296140 ANKRD7Q92527 254 aa11.37□□□□□ -0.59
CCR1-201ENST00000296140 FBXW7Q969H0 707 aa11.37□□□□□ -0.59
CCR1-201ENST00000296140 NEK1Q96PY6 1258 aa11.37□□□□□ -0.59
CCR1-201ENST00000296140 GOLPH3LQ9H4A5 285 aa11.37□□□□□ -0.59
CCR1-201ENST00000296140 CHAF1AQ13111 956 aaPredicted RBP11.37□□□□□ -0.59
CCR1-201ENST00000296140 COPS6Q7L5N1 327 aa11.37□□□□□ -0.59
CCR1-201ENST00000296140 CLIP2Q9UDT6 1046 aa11.37□□□□□ -0.59
CCR1-201ENST00000296140 CTIFO43310 598 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms