RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 UBAC1Q9BSL1 405 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 RRP15Q9Y3B9 282 aaKnown RBP12.51□□□□□ -0.41
FYCO1-201ENST00000296137 TUBB2AQ13885 445 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 HSP90AA5PQ58FG0 334 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 JPH2Q9BR39 696 aaPredicted RBP12.51□□□□□ -0.41
FYCO1-201ENST00000296137 TUBB2BQ9BVA1 445 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 DHX29Q7Z478 1369 aaKnown RBP12.51□□□□□ -0.41
FYCO1-201ENST00000296137 STX6O43752 255 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 KRT86O43790 486 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 PPFIA1Q13136 1202 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 STAG1Q8WVM7 1258 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 PALMDQ9NP74 551 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 GOLGA6BA6NDN3 693 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
FYCO1-201ENST00000296137 KIAA1524Q8TCG1 905 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 NECTIN2Q92692 538 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 CABS1Q96KC9 395 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 IRAK4Q9NWZ3 460 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 ICE2Q659A1 982 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 UBLCP1Q8WVY7 318 aaPredicted RBP12.5□□□□□ -0.41
FYCO1-201ENST00000296137 GMNNO75496 209 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 SYT10Q6XYQ8 523 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 FSIP1Q8NA03 581 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 PUF60Q9UHX1 559 aaKnown RBP12.5□□□□□ -0.41
FYCO1-201ENST00000296137 PTGS1P23219 599 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 VPS41P49754 854 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 CHMP4BP1P59074 171 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 STAC3Q96MF2 364 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 WDR97A6NE52 1622 aa12.5□□□□□ -0.41
FYCO1-201ENST00000296137 KANK4Q5T7N3 995 aaPredicted RBP12.5□□□□□ -0.41
FYCO1-201ENST00000296137 CXorf38Q8TB03 319 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 INF2Q27J81 1249 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 SURF6O75683 361 aaKnown RBP12.49□□□□□ -0.41
FYCO1-201ENST00000296137 IFT81Q8WYA0 676 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 NKTRP30414 1462 aaKnown RBP12.49□□□□□ -0.41
FYCO1-201ENST00000296137 ATP2A2P16615 1042 aaKnown RBP12.49□□□□□ -0.41
FYCO1-201ENST00000296137 KANK3Q6NY19 840 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 JAKMIP2Q96AA8 810 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 BCL2L12Q9HB09 334 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 RRBP1Q9P2E9 1410 aaKnown RBP12.49□□□□□ -0.41
FYCO1-201ENST00000296137 TXNDC9O14530 226 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 CAPZA3Q96KX2 299 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 Q9H521 79 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 GDPD2Q9HCC8 539 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 SMIM23A6NLE4 172 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 E7EVH7 732 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 RPSAP08865 295 aaKnown RBP12.49□□□□□ -0.41
FYCO1-201ENST00000296137 TACO1Q9BSH4 297 aaKnown RBP12.49□□□□□ -0.41
FYCO1-201ENST00000296137 FAN1Q9Y2M0 1017 aa12.49□□□□□ -0.41
FYCO1-201ENST00000296137 CWC27Q6UX04 472 aaKnown RBP12.48□□□□□ -0.41
FYCO1-201ENST00000296137 KCNK9Q9NPC2 374 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 FERMT3Q86UX7 667 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 ANKRD24Q8TF21 1146 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 ZBTB9Q96C00 473 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 TSC22D3Q99576 134 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 SF3B2Q13435 895 aaKnown RBP12.48□□□□□ -0.41
FYCO1-201ENST00000296137 TRPC3Q13507 836 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 CREB3O43889 395 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 BCAR3O75815 825 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 SLMAPQ14BN4 828 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 NKIRAS1Q9NYS0 192 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 LOC102724159A0A0B4J2E5 919 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 PCYT1AP49585 367 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 PWP2Q15269 919 aaKnown RBP12.48□□□□□ -0.41
FYCO1-201ENST00000296137 ERCC6LQ2NKX8 1250 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 PHAXQ9H814 394 aaKnown RBP12.48□□□□□ -0.41
FYCO1-201ENST00000296137 PRPHP41219 470 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 TAOK1Q7L7X3 1001 aa12.48□□□□□ -0.41
FYCO1-201ENST00000296137 KRT83P78385 493 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.47□□□□□ -0.41
FYCO1-201ENST00000296137 STK38LQ9Y2H1 464 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 ZNF131P52739 623 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 LIG3P49916 1009 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 RPGRIP1LQ68CZ1 1315 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 ATP2A1O14983 1001 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 DUSP27Q5VZP5 1158 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 SMC1BQ8NDV3 1235 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 TMEM57Q8N5G2 664 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 BIN1O00499 593 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 NEK11Q8NG66 645 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 UIMC1Q96RL1 719 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 TRIM6Q9C030 488 aaPredicted RBP12.47□□□□□ -0.41
FYCO1-201ENST00000296137 SIL1Q9H173 461 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 SYTL4Q96C24 671 aaPredicted RBP12.47□□□□□ -0.41
FYCO1-201ENST00000296137 ADAMTS8Q9UP79 889 aa12.47□□□□□ -0.41
FYCO1-201ENST00000296137 E2F4Q16254 413 aa12.46□□□□□ -0.41
FYCO1-201ENST00000296137 YY1AP1Q9H869 796 aa12.46□□□□□ -0.41
FYCO1-201ENST00000296137 LIMCH1Q9UPQ0 1083 aa12.46□□□□□ -0.41
FYCO1-201ENST00000296137 PPP1R9AQ9ULJ8 1098 aa12.46□□□□□ -0.41
FYCO1-201ENST00000296137 PHLDB3Q6NSJ2 640 aa12.46□□□□□ -0.41
FYCO1-201ENST00000296137 ATF7IPQ6VMQ6 1270 aa12.46□□□□□ -0.41
FYCO1-201ENST00000296137 SAAL1Q96ER3 474 aa12.46□□□□□ -0.41
FYCO1-201ENST00000296137 NUB1Q9Y5A7 615 aa12.46□□□□□ -0.41
FYCO1-201ENST00000296137 MTIF2P46199 727 aaKnown RBP12.46□□□□□ -0.42
FYCO1-201ENST00000296137 SMARCA4P51532 1647 aa12.46□□□□□ -0.42
FYCO1-201ENST00000296137 CFAP157Q5JU67 520 aa12.46□□□□□ -0.42
FYCO1-201ENST00000296137 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.46□□□□□ -0.42
FYCO1-201ENST00000296137 CCDC63Q8NA47 563 aa12.46□□□□□ -0.42
FYCO1-201ENST00000296137 CENPKQ9BS16 269 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms