RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 PHKG2P15735 406 aa23.28■■□□□ 1.32
NKX6-1-201ENST00000295886 UVSSAQ2YD98 709 aa23.28■■□□□ 1.32
NKX6-1-201ENST00000295886 LETM1O95202 739 aaPredicted RBP23.27■■□□□ 1.32
NKX6-1-201ENST00000295886 LIG1P18858 919 aa23.27■■□□□ 1.32
NKX6-1-201ENST00000295886 RNF20Q5VTR2 975 aa23.27■■□□□ 1.32
NKX6-1-201ENST00000295886 TAF5LO75529 589 aa23.27■■□□□ 1.32
NKX6-1-201ENST00000295886 CSPP1Q1MSJ5 1256 aa23.27■■□□□ 1.32
NKX6-1-201ENST00000295886 SLFNL1Q499Z3 407 aa23.27■■□□□ 1.32
NKX6-1-201ENST00000295886 PROSER2Q86WR7 435 aaPredicted RBP23.27■■□□□ 1.32
NKX6-1-201ENST00000295886 CSB-PGBD3P0DP91 1061 aa23.26■■□□□ 1.31
NKX6-1-201ENST00000295886 PTPN12Q05209 780 aaKnown RBP23.26■■□□□ 1.31
NKX6-1-201ENST00000295886 CHRNA2Q15822 529 aa23.26■■□□□ 1.31
NKX6-1-201ENST00000295886 JAK2O60674 1132 aa23.26■■□□□ 1.31
NKX6-1-201ENST00000295886 KDM4AO75164 1064 aa23.26■■□□□ 1.31
NKX6-1-201ENST00000295886 DNTTIP2Q5QJE6 756 aaKnown RBP23.26■■□□□ 1.31
NKX6-1-201ENST00000295886 DBNDD2Q9BQY9 259 aa23.26■■□□□ 1.31
NKX6-1-201ENST00000295886 LRRC2Q9BYS8 371 aa23.26■■□□□ 1.31
NKX6-1-201ENST00000295886 C5P01031 1676 aa23.26■■□□□ 1.31
NKX6-1-201ENST00000295886 TERF1P54274 439 aa23.25■■□□□ 1.31
NKX6-1-201ENST00000295886 TNNI3KQ59H18 835 aa23.25■■□□□ 1.31
NKX6-1-201ENST00000295886 FPGT-TNNI3KV9GXZ4 949 aa23.25■■□□□ 1.31
NKX6-1-201ENST00000295886 SIPA1L3O60292 1781 aaPredicted RBP23.25■■□□□ 1.31
NKX6-1-201ENST00000295886 KRT85P78386 507 aa23.25■■□□□ 1.31
NKX6-1-201ENST00000295886 DDX46Q7L014 1031 aaKnown RBP23.25■■□□□ 1.31
NKX6-1-201ENST00000295886 TATP17735 454 aaPredicted RBP23.24■■□□□ 1.31
NKX6-1-201ENST00000295886 SNRKQ9NRH2 765 aa23.24■■□□□ 1.31
NKX6-1-201ENST00000295886 RFX5P48382 616 aaPredicted RBP23.24■■□□□ 1.31
NKX6-1-201ENST00000295886 LRP10Q7Z4F1 713 aa23.24■■□□□ 1.31
NKX6-1-201ENST00000295886 CKAP2LQ8IYA6 745 aa23.23■■□□□ 1.31
NKX6-1-201ENST00000295886 TTC5Q8N0Z6 440 aa23.23■■□□□ 1.31
NKX6-1-201ENST00000295886 SPC24Q8NBT2 197 aa23.23■■□□□ 1.31
NKX6-1-201ENST00000295886 DDX11Q96FC9 970 aa23.23■■□□□ 1.31
NKX6-1-201ENST00000295886 MEGF6O75095 1541 aa23.23■■□□□ 1.31
NKX6-1-201ENST00000295886 A0A087WZG4 1122 aa23.23■■□□□ 1.31
NKX6-1-201ENST00000295886 ARID3AQ99856 593 aa23.23■■□□□ 1.31
NKX6-1-201ENST00000295886 CYP27B1O15528 508 aa23.22■■□□□ 1.31
NKX6-1-201ENST00000295886 COPRSQ9NQ92 184 aa23.22■■□□□ 1.31
NKX6-1-201ENST00000295886 PPFIA3O75145 1194 aa23.21■■□□□ 1.31
NKX6-1-201ENST00000295886 FOSBP53539 338 aa23.21■■□□□ 1.31
NKX6-1-201ENST00000295886 SNRPA1P09661 255 aaKnown RBP23.21■■□□□ 1.31
NKX6-1-201ENST00000295886 ANKRD1Q15327 319 aa23.21■■□□□ 1.31
NKX6-1-201ENST00000295886 ZNF609O15014 1411 aa23.2■■□□□ 1.3
NKX6-1-201ENST00000295886 ATP5JP18859 108 aa23.2■■□□□ 1.3
NKX6-1-201ENST00000295886 DACT1Q9NYF0 836 aa23.2■■□□□ 1.3
NKX6-1-201ENST00000295886 HSP90B1P14625 803 aaKnown RBP23.2■■□□□ 1.3
NKX6-1-201ENST00000295886 IFNL2Q8IZJ0 200 aa23.2■■□□□ 1.3
NKX6-1-201ENST00000295886 SPATA32Q96LK8 384 aa23.2■■□□□ 1.3
NKX6-1-201ENST00000295886 PDCP20941 246 aa23.19■■□□□ 1.3
NKX6-1-201ENST00000295886 SASS6Q6UVJ0 657 aa23.19■■□□□ 1.3
NKX6-1-201ENST00000295886 Q6ZUG5 572 aa23.19■■□□□ 1.3
NKX6-1-201ENST00000295886 NEK1Q96PY6 1258 aa23.19■■□□□ 1.3
NKX6-1-201ENST00000295886 CYP21A2P08686 494 aa23.19■■□□□ 1.3
NKX6-1-201ENST00000295886 CCDC192P0DO97 292 aa23.19■■□□□ 1.3
NKX6-1-201ENST00000295886 NOLC1Q14978 699 aaKnown RBP eCLIP23.19■■□□□ 1.3
NKX6-1-201ENST00000295886 LMBR1LQ6UX01 489 aa23.19■■□□□ 1.3
NKX6-1-201ENST00000295886 NUP62CLQ9H1M0 184 aa23.19■■□□□ 1.3
NKX6-1-201ENST00000295886 PIBF1Q8WXW3 757 aa23.18■■□□□ 1.3
NKX6-1-201ENST00000295886 LUZP1Q86V48 1076 aa23.18■■□□□ 1.3
NKX6-1-201ENST00000295886 TSC1Q92574 1164 aa23.18■■□□□ 1.3
NKX6-1-201ENST00000295886 HMG20BQ9P0W2 317 aa23.18■■□□□ 1.3
NKX6-1-201ENST00000295886 C1orf167Q5SNV9 1468 aa23.18■■□□□ 1.3
NKX6-1-201ENST00000295886 CAMTA1Q9Y6Y1 1673 aa23.17■■□□□ 1.3
NKX6-1-201ENST00000295886 GOLGA6L4A6NEF3 574 aa23.17■■□□□ 1.3
NKX6-1-201ENST00000295886 NEUROD6Q96NK8 337 aa23.17■■□□□ 1.3
NKX6-1-201ENST00000295886 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.17■■□□□ 1.3
NKX6-1-201ENST00000295886 CEBPZQ03701 1054 aaKnown RBP23.17■■□□□ 1.3
NKX6-1-201ENST00000295886 MAP3K11Q16584 847 aa23.17■■□□□ 1.3
NKX6-1-201ENST00000295886 BRF1Q92994 677 aa23.17■■□□□ 1.3
NKX6-1-201ENST00000295886 TRPM3Q9HCF6 1732 aaPredicted RBP23.17■■□□□ 1.3
NKX6-1-201ENST00000295886 A0A0G2JLW4 131 aa23.16■■□□□ 1.3
NKX6-1-201ENST00000295886 USPL1Q5W0Q7 1092 aa23.16■■□□□ 1.3
NKX6-1-201ENST00000295886 LEO1Q8WVC0 666 aaPredicted RBP23.16■■□□□ 1.3
NKX6-1-201ENST00000295886 FMNL2Q96PY5 1086 aa23.16■■□□□ 1.3
NKX6-1-201ENST00000295886 JCADQ9P266 1359 aa23.16■■□□□ 1.3
NKX6-1-201ENST00000295886 TYRO3Q06418 890 aa23.16■■□□□ 1.3
NKX6-1-201ENST00000295886 MRVI1Q9Y6F6 885 aa23.16■■□□□ 1.3
NKX6-1-201ENST00000295886 TIMM10P62072 90 aa23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 STOX1Q6ZVD7 989 aa23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 GTF3C6Q969F1 213 aa23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 TNMDQ9H2S6 317 aa23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 ADAMTS7Q9UKP4 1686 aa23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 CABP4P57796 275 aa23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 FGD1P98174 961 aa23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 TSGA10IPQ3SY00 556 aa23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 RABL6Q3YEC7 729 aaPredicted RBP23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 MAP7D2Q96T17 732 aa23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 KCNF1Q9H3M0 494 aa23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 MRC1P22897 1456 aa23.15■■□□□ 1.3
NKX6-1-201ENST00000295886 GOLIM4O00461 696 aa23.14■■□□□ 1.3
NKX6-1-201ENST00000295886 PGBD1Q96JS3 809 aa23.14■■□□□ 1.3
NKX6-1-201ENST00000295886 PYCARDQ9ULZ3 195 aa23.14■■□□□ 1.3
NKX6-1-201ENST00000295886 NR1I2O75469 434 aa23.14■■□□□ 1.29
NKX6-1-201ENST00000295886 MCMDC2Q4G0Z9 681 aa23.14■■□□□ 1.29
NKX6-1-201ENST00000295886 BICD2Q8TD16 824 aa23.13■■□□□ 1.29
NKX6-1-201ENST00000295886 DCAF5Q96JK2 942 aa23.13■■□□□ 1.29
NKX6-1-201ENST00000295886 HAUS7Q99871 368 aa23.13■■□□□ 1.29
NKX6-1-201ENST00000295886 SCN11AQ9UI33 1791 aa23.13■■□□□ 1.29
NKX6-1-201ENST00000295886 ELP1O95163 1332 aa23.13■■□□□ 1.29
NKX6-1-201ENST00000295886 FAM177BA6PVY3 158 aa23.13■■□□□ 1.29
NKX6-1-201ENST00000295886 ANO6Q4KMQ2 910 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms