RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TSPYL6Q8N831 410 aa20.55■□□□□ 0.88
CDC42EP3-201ENST00000295324 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.55■□□□□ 0.88
CDC42EP3-201ENST00000295324 NPC1L1Q9UHC9 1359 aa20.55■□□□□ 0.88
CDC42EP3-201ENST00000295324 KIF20AO95235 890 aa20.55■□□□□ 0.88
CDC42EP3-201ENST00000295324 GUCY1B3Q02153 619 aa20.55■□□□□ 0.88
CDC42EP3-201ENST00000295324 NUCB1Q02818 461 aa20.55■□□□□ 0.88
CDC42EP3-201ENST00000295324 WWC3Q9ULE0 1092 aa20.55■□□□□ 0.88
CDC42EP3-201ENST00000295324 PDE1AP54750 535 aa20.55■□□□□ 0.88
CDC42EP3-201ENST00000295324 SLC4A8Q2Y0W8 1093 aa20.55■□□□□ 0.88
CDC42EP3-201ENST00000295324 SLC52A2Q9HAB3 445 aa20.55■□□□□ 0.88
CDC42EP3-201ENST00000295324 BAG6P46379 1132 aa20.54■□□□□ 0.88
CDC42EP3-201ENST00000295324 MCMDC2Q4G0Z9 681 aa20.54■□□□□ 0.88
CDC42EP3-201ENST00000295324 C16orf71Q8IYS4 520 aaPredicted RBP20.54■□□□□ 0.88
CDC42EP3-201ENST00000295324 KRT24Q2M2I5 525 aa20.54■□□□□ 0.88
CDC42EP3-201ENST00000295324 ORC3Q9UBD5 711 aaPredicted RBP20.54■□□□□ 0.88
CDC42EP3-201ENST00000295324 GNAT2P19087 354 aa20.54■□□□□ 0.88
CDC42EP3-201ENST00000295324 GNAQP50148 359 aa20.54■□□□□ 0.88
CDC42EP3-201ENST00000295324 MAP3K11Q16584 847 aa20.53■□□□□ 0.88
CDC42EP3-201ENST00000295324 CCDC87Q9NVE4 849 aa20.53■□□□□ 0.88
CDC42EP3-201ENST00000295324 PA2G4Q9UQ80 394 aaKnown RBP20.53■□□□□ 0.88
CDC42EP3-201ENST00000295324 HELBQ8NG08 1087 aaPredicted RBP20.53■□□□□ 0.88
CDC42EP3-201ENST00000295324 VEZTQ9HBM0 779 aa20.53■□□□□ 0.88
CDC42EP3-201ENST00000295324 PICALMQ13492 652 aa20.53■□□□□ 0.88
CDC42EP3-201ENST00000295324 PAG1Q9NWQ8 432 aa20.53■□□□□ 0.88
CDC42EP3-201ENST00000295324 FAM43AQ8N2R8 423 aa20.52■□□□□ 0.88
CDC42EP3-201ENST00000295324 TCP11L1Q9NUJ3 509 aa20.52■□□□□ 0.88
CDC42EP3-201ENST00000295324 TMEM94Q12767 1356 aa20.52■□□□□ 0.88
CDC42EP3-201ENST00000295324 MAGEB6P1A0A0J9YX57 407 aa20.52■□□□□ 0.88
CDC42EP3-201ENST00000295324 TEX35Q5T0J7 233 aa20.52■□□□□ 0.88
CDC42EP3-201ENST00000295324 TSG101Q99816 390 aa20.52■□□□□ 0.88
CDC42EP3-201ENST00000295324 PER1O15534 1290 aaPredicted RBP20.52■□□□□ 0.88
CDC42EP3-201ENST00000295324 LMOD1P29536 600 aaPredicted RBP20.52■□□□□ 0.88
CDC42EP3-201ENST00000295324 EIF5P55010 431 aaKnown RBP20.52■□□□□ 0.88
CDC42EP3-201ENST00000295324 TTC41PQ6P2S7 1318 aa20.52■□□□□ 0.88
CDC42EP3-201ENST00000295324 CCDC191Q8NCU4 936 aa20.52■□□□□ 0.87
CDC42EP3-201ENST00000295324 RIMBP2O15034 1052 aa20.51■□□□□ 0.87
CDC42EP3-201ENST00000295324 LDHBP07195 334 aaKnown RBP20.51■□□□□ 0.87
CDC42EP3-201ENST00000295324 CCDC144CPQ8IYA2 1237 aa20.51■□□□□ 0.87
CDC42EP3-201ENST00000295324 ARHGEF5Q12774 1597 aa20.51■□□□□ 0.87
CDC42EP3-201ENST00000295324 IFIT1BQ5T764 474 aaKnown RBP20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 RBM26Q5T8P6 1007 aaKnown RBP20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 SEPT11Q9NVA2 429 aaKnown RBP20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 APBA3O96018 575 aa20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 POTEJP0CG39 1038 aa20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 METTL22Q9BUU2 404 aaPredicted RBP20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 IGHDP01880 384 aa20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 SDSP20132 328 aa20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 MCM4P33991 863 aa20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 FAM89AQ96GI7 184 aa20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 SLC26A6Q9BXS9 759 aa20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 NBPF7P0C2Y1 421 aaPredicted RBP20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 CALML4Q96GE6 196 aa20.5■□□□□ 0.87
CDC42EP3-201ENST00000295324 SPC24Q8NBT2 197 aa20.49■□□□□ 0.87
CDC42EP3-201ENST00000295324 ZBTB43O43298 467 aa20.49■□□□□ 0.87
CDC42EP3-201ENST00000295324 NPHP4O75161 1426 aaPredicted RBP20.49■□□□□ 0.87
CDC42EP3-201ENST00000295324 PLEKHG1Q9ULL1 1385 aa20.49■□□□□ 0.87
CDC42EP3-201ENST00000295324 GRM1Q13255 1194 aa20.49■□□□□ 0.87
CDC42EP3-201ENST00000295324 ERVV-2B6SEH9 535 aa20.49■□□□□ 0.87
CDC42EP3-201ENST00000295324 CALRP27797 417 aaKnown RBP20.49■□□□□ 0.87
CDC42EP3-201ENST00000295324 TNNI2P48788 182 aa20.49■□□□□ 0.87
CDC42EP3-201ENST00000295324 UBA5Q9GZZ9 404 aa20.49■□□□□ 0.87
CDC42EP3-201ENST00000295324 FGFR1OPO95684 399 aaKnown RBP20.48■□□□□ 0.87
CDC42EP3-201ENST00000295324 KLF18A0A0U1RQI7 1052 aa20.48■□□□□ 0.87
CDC42EP3-201ENST00000295324 ABCA8O94911 1581 aa20.48■□□□□ 0.87
CDC42EP3-201ENST00000295324 MYO5CQ9NQX4 1742 aa20.48■□□□□ 0.87
CDC42EP3-201ENST00000295324 HSP90B2PQ58FF3 399 aa20.48■□□□□ 0.87
CDC42EP3-201ENST00000295324 PDE8AO60658 829 aa20.48■□□□□ 0.87
CDC42EP3-201ENST00000295324 DENND2AQ9ULE3 1009 aa20.48■□□□□ 0.87
CDC42EP3-201ENST00000295324 CCDC148Q8NFR7 591 aa20.48■□□□□ 0.87
CDC42EP3-201ENST00000295324 PYM1Q9BRP8 204 aaKnown RBP20.48■□□□□ 0.87
CDC42EP3-201ENST00000295324 LGR6Q9HBX8 967 aa20.48■□□□□ 0.87
CDC42EP3-201ENST00000295324 AMPD3Q01432 767 aa20.47■□□□□ 0.87
CDC42EP3-201ENST00000295324 BRF1Q92994 677 aa20.47■□□□□ 0.87
CDC42EP3-201ENST00000295324 DNAJC10Q8IXB1 793 aa20.47■□□□□ 0.87
CDC42EP3-201ENST00000295324 PCDHB15Q9Y5E8 787 aa20.47■□□□□ 0.87
CDC42EP3-201ENST00000295324 RNF113AO15541 343 aaKnown RBP20.47■□□□□ 0.87
CDC42EP3-201ENST00000295324 TFCP2Q12800 502 aa20.47■□□□□ 0.87
CDC42EP3-201ENST00000295324 CEP85Q6P2H3 762 aa20.47■□□□□ 0.87
CDC42EP3-201ENST00000295324 ERCC4Q92889 916 aaPredicted RBP20.47■□□□□ 0.87
CDC42EP3-201ENST00000295324 BICC1Q9H694 974 aaKnown RBP20.47■□□□□ 0.87
CDC42EP3-201ENST00000295324 MLH3Q9UHC1 1453 aa20.47■□□□□ 0.87
CDC42EP3-201ENST00000295324 EFCAB6Q5THR3 1501 aa20.47■□□□□ 0.87
CDC42EP3-201ENST00000295324 UBA7P41226 1012 aa20.46■□□□□ 0.87
CDC42EP3-201ENST00000295324 MCM9Q9NXL9 1143 aa20.46■□□□□ 0.87
CDC42EP3-201ENST00000295324 H0YIN7 160 aa20.46■□□□□ 0.87
CDC42EP3-201ENST00000295324 ANO10Q9NW15 660 aa20.46■□□□□ 0.87
CDC42EP3-201ENST00000295324 RBM8AQ9Y5S9 174 aaKnown RBP20.46■□□□□ 0.87
CDC42EP3-201ENST00000295324 UFL1O94874 794 aa20.46■□□□□ 0.87
CDC42EP3-201ENST00000295324 SAMM50Q9Y512 469 aa20.46■□□□□ 0.87
CDC42EP3-201ENST00000295324 A1BGP04217 495 aa20.46■□□□□ 0.87
CDC42EP3-201ENST00000295324 ZNF397Q8NF99 534 aaPredicted RBP20.46■□□□□ 0.87
CDC42EP3-201ENST00000295324 DCTPP1Q9H773 170 aa20.46■□□□□ 0.87
CDC42EP3-201ENST00000295324 CHL1O00533 1208 aa20.45■□□□□ 0.86
CDC42EP3-201ENST00000295324 EYA2O00167 538 aa20.45■□□□□ 0.86
CDC42EP3-201ENST00000295324 GJB2P29033 226 aa20.45■□□□□ 0.86
CDC42EP3-201ENST00000295324 B4DLN1 442 aa20.45■□□□□ 0.86
CDC42EP3-201ENST00000295324 HCLS1P14317 486 aaPredicted RBP20.45■□□□□ 0.86
CDC42EP3-201ENST00000295324 MRPL12P52815 198 aaKnown RBP20.45■□□□□ 0.86
CDC42EP3-201ENST00000295324 RTN1Q16799 776 aa20.45■□□□□ 0.86
CDC42EP3-201ENST00000295324 FKBP15Q5T1M5 1219 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms