RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 NRXN2Q9P2S2 1712 aa18.9■□□□□ 0.62
CCDC140-201ENST00000295226 POLD1P28340 1107 aa18.9■□□□□ 0.62
CCDC140-201ENST00000295226 RPAP2Q8IXW5 612 aaPredicted RBP18.9■□□□□ 0.62
CCDC140-201ENST00000295226 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
CCDC140-201ENST00000295226 SEC31BQ9NQW1 1179 aa18.9■□□□□ 0.62
CCDC140-201ENST00000295226 MYH3P11055 1940 aa18.9■□□□□ 0.62
CCDC140-201ENST00000295226 ZNF594Q96JF6 807 aaPredicted RBP18.89■□□□□ 0.61
CCDC140-201ENST00000295226 BRIP1Q9BX63 1249 aa18.89■□□□□ 0.61
CCDC140-201ENST00000295226 PA2G4Q9UQ80 394 aaKnown RBP18.89■□□□□ 0.61
CCDC140-201ENST00000295226 ANKRD31Q8N7Z5 1873 aa18.88■□□□□ 0.61
CCDC140-201ENST00000295226 LAMB2P55268 1798 aa18.88■□□□□ 0.61
CCDC140-201ENST00000295226 MTX1Q13505 466 aa18.88■□□□□ 0.61
CCDC140-201ENST00000295226 CCDC136Q96JN2 1154 aa18.88■□□□□ 0.61
CCDC140-201ENST00000295226 TSHZ2Q9NRE2 1034 aa18.88■□□□□ 0.61
CCDC140-201ENST00000295226 TAF1P21675 1872 aa18.88■□□□□ 0.61
CCDC140-201ENST00000295226 HSP90B1P14625 803 aaKnown RBP18.87■□□□□ 0.61
CCDC140-201ENST00000295226 ITGA6P23229 1130 aa18.87■□□□□ 0.61
CCDC140-201ENST00000295226 RFX5P48382 616 aaPredicted RBP18.87■□□□□ 0.61
CCDC140-201ENST00000295226 POLA2Q14181 598 aa18.87■□□□□ 0.61
CCDC140-201ENST00000295226 SF3B3Q15393 1217 aaKnown RBP18.87■□□□□ 0.61
CCDC140-201ENST00000295226 CCDC152Q4G0S7 254 aa18.87■□□□□ 0.61
CCDC140-201ENST00000295226 SSH3Q8TE77 659 aa18.87■□□□□ 0.61
CCDC140-201ENST00000295226 SPON1Q9HCB6 807 aa18.87■□□□□ 0.61
CCDC140-201ENST00000295226 PPP1R1BQ9UD71 204 aaPredicted RBP18.87■□□□□ 0.61
CCDC140-201ENST00000295226 KLHL34Q8N239 644 aa18.86■□□□□ 0.61
CCDC140-201ENST00000295226 IFIT5Q13325 482 aaKnown RBP18.85■□□□□ 0.61
CCDC140-201ENST00000295226 CCDC57Q2TAC2 916 aa18.85■□□□□ 0.61
CCDC140-201ENST00000295226 SIL1Q9H173 461 aa18.85■□□□□ 0.61
CCDC140-201ENST00000295226 COL4A1P02462 1669 aa18.85■□□□□ 0.61
CCDC140-201ENST00000295226 CHRNA5P30532 468 aa18.85■□□□□ 0.61
CCDC140-201ENST00000295226 RWDD1Q9H446 243 aaPredicted RBP18.85■□□□□ 0.61
CCDC140-201ENST00000295226 ANKRD18BA2A2Z9 1011 aa18.84■□□□□ 0.61
CCDC140-201ENST00000295226 APBB1O00213 710 aa18.84■□□□□ 0.61
CCDC140-201ENST00000295226 HMMRO75330 724 aa18.84■□□□□ 0.61
CCDC140-201ENST00000295226 PDE6BP35913 854 aa18.84■□□□□ 0.61
CCDC140-201ENST00000295226 PTPN12Q05209 780 aaKnown RBP18.84■□□□□ 0.61
CCDC140-201ENST00000295226 HDAC1Q13547 482 aaPredicted RBP18.84■□□□□ 0.61
CCDC140-201ENST00000295226 C2CD5Q86YS7 1000 aa18.84■□□□□ 0.61
CCDC140-201ENST00000295226 EXOC6BQ9Y2D4 811 aa18.84■□□□□ 0.61
CCDC140-201ENST00000295226 SRCAPQ6ZRS2 3230 aa18.84■□□□□ 0.61
CCDC140-201ENST00000295226 KLRG2A4D1S0 409 aaPredicted RBP18.83■□□□□ 0.61
CCDC140-201ENST00000295226 SURF6O75683 361 aaKnown RBP18.83■□□□□ 0.61
CCDC140-201ENST00000295226 CRY2Q49AN0 593 aa18.83■□□□□ 0.61
CCDC140-201ENST00000295226 SLC51AQ86UW1 340 aa18.83■□□□□ 0.61
CCDC140-201ENST00000295226 RPGRQ92834 1020 aaKnown RBP18.83■□□□□ 0.61
CCDC140-201ENST00000295226 CELF1Q92879 486 aaKnown RBP18.83■□□□□ 0.61
CCDC140-201ENST00000295226 PUS3Q9BZE2 481 aaKnown RBP18.83■□□□□ 0.61
CCDC140-201ENST00000295226 RIC1Q4ADV7 1423 aa18.82■□□□□ 0.6
CCDC140-201ENST00000295226 C10orf71Q711Q0 1435 aa18.82■□□□□ 0.6
CCDC140-201ENST00000295226 SRGNP10124 158 aa18.82■□□□□ 0.6
CCDC140-201ENST00000295226 TAF7LQ5H9L4 462 aa18.82■□□□□ 0.6
CCDC140-201ENST00000295226 DDX46Q7L014 1031 aaKnown RBP18.82■□□□□ 0.6
CCDC140-201ENST00000295226 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
CCDC140-201ENST00000295226 A0A0G2JLW4 131 aa18.82■□□□□ 0.6
CCDC140-201ENST00000295226 LRRC24Q50LG9 513 aa18.82■□□□□ 0.6
CCDC140-201ENST00000295226 ZNF622Q969S3 477 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCDC140-201ENST00000295226 H0YIN7 160 aa18.8■□□□□ 0.6
CCDC140-201ENST00000295226 DCTPP1Q9H773 170 aa18.8■□□□□ 0.6
CCDC140-201ENST00000295226 COPRSQ9NQ92 184 aa18.8■□□□□ 0.6
CCDC140-201ENST00000295226 WWC3Q9ULE0 1092 aa18.8■□□□□ 0.6
CCDC140-201ENST00000295226 COL11A2P13942 1736 aaPredicted RBP18.8■□□□□ 0.6
CCDC140-201ENST00000295226 RTL9Q8NET4 1388 aa18.8■□□□□ 0.6
CCDC140-201ENST00000295226 DPEP1P16444 411 aa18.79■□□□□ 0.6
CCDC140-201ENST00000295226 RBM17Q96I25 401 aaKnown RBP18.79■□□□□ 0.6
CCDC140-201ENST00000295226 SPEF2Q9C093 1822 aa18.79■□□□□ 0.6
CCDC140-201ENST00000295226 NPR1P16066 1061 aa18.79■□□□□ 0.6
CCDC140-201ENST00000295226 HOXA10P31260 410 aaPredicted RBP18.79■□□□□ 0.6
CCDC140-201ENST00000295226 RPS8P62241 208 aaKnown RBP18.79■□□□□ 0.6
CCDC140-201ENST00000295226 LDHAL6AQ6ZMR3 332 aa18.79■□□□□ 0.6
CCDC140-201ENST00000295226 ANKRD18AQ8IVF6 992 aa18.79■□□□□ 0.6
CCDC140-201ENST00000295226 CDC5LQ99459 802 aaKnown RBP18.79■□□□□ 0.6
CCDC140-201ENST00000295226 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.79■□□□□ 0.6
CCDC140-201ENST00000295226 KDM2BQ8NHM5 1336 aa18.78■□□□□ 0.6
CCDC140-201ENST00000295226 IGHMBP2P38935 993 aaKnown RBP18.78■□□□□ 0.6
CCDC140-201ENST00000295226 G3BP1Q13283 466 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCDC140-201ENST00000295226 OS9Q13438 667 aaPredicted RBP18.78■□□□□ 0.6
CCDC140-201ENST00000295226 GRAPQ13588 217 aa18.78■□□□□ 0.6
CCDC140-201ENST00000295226 ATG9AQ7Z3C6 839 aa18.78■□□□□ 0.6
CCDC140-201ENST00000295226 GRAPLQ8TC17 118 aaPredicted RBP18.78■□□□□ 0.6
CCDC140-201ENST00000295226 MASTLQ96GX5 879 aa18.78■□□□□ 0.6
CCDC140-201ENST00000295226 NOP58Q9Y2X3 529 aaKnown RBP18.78■□□□□ 0.6
CCDC140-201ENST00000295226 EYA2O00167 538 aa18.77■□□□□ 0.6
CCDC140-201ENST00000295226 SMARCA5O60264 1052 aaPredicted RBP18.77■□□□□ 0.6
CCDC140-201ENST00000295226 KCNA3P22001 575 aa18.77■□□□□ 0.6
CCDC140-201ENST00000295226 MPHOSPH8Q99549 860 aa18.77■□□□□ 0.6
CCDC140-201ENST00000295226 CNNM1Q9NRU3 951 aa18.77■□□□□ 0.6
CCDC140-201ENST00000295226 NLGN2Q8NFZ4 835 aa18.76■□□□□ 0.59
CCDC140-201ENST00000295226 HELBQ8NG08 1087 aaPredicted RBP18.76■□□□□ 0.59
CCDC140-201ENST00000295226 CRAMP1Q96RY5 1269 aa18.76■□□□□ 0.59
CCDC140-201ENST00000295226 RIPOR2Q9Y4F9 1068 aa18.76■□□□□ 0.59
CCDC140-201ENST00000295226 KIF13BQ9NQT8 1826 aa18.76■□□□□ 0.59
CCDC140-201ENST00000295226 SASH1O94885 1247 aa18.76■□□□□ 0.59
CCDC140-201ENST00000295226 ANKRD45Q5TZF3 282 aa18.76■□□□□ 0.59
CCDC140-201ENST00000295226 SKAP1Q86WV1 359 aa18.76■□□□□ 0.59
CCDC140-201ENST00000295226 SMC5Q8IY18 1101 aa18.76■□□□□ 0.59
CCDC140-201ENST00000295226 ZNF219Q9P2Y4 722 aaPredicted RBP18.76■□□□□ 0.59
CCDC140-201ENST00000295226 GOLGB1Q14789 3259 aaKnown RBP18.75■□□□□ 0.59
CCDC140-201ENST00000295226 STYK1Q6J9G0 422 aa18.75■□□□□ 0.59
CCDC140-201ENST00000295226 OLFM4Q6UX06 510 aa18.75■□□□□ 0.59
CCDC140-201ENST00000295226 FHDC1Q9C0D6 1143 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms