RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 CCDC183Q5T5S1 534 aa18.26■□□□□ 0.51
LRRTM1-201ENST00000295057 PYCARDQ9ULZ3 195 aa18.26■□□□□ 0.51
LRRTM1-201ENST00000295057 CERKQ8TCT0 537 aa18.25■□□□□ 0.51
LRRTM1-201ENST00000295057 SYTL4Q96C24 671 aaPredicted RBP18.25■□□□□ 0.51
LRRTM1-201ENST00000295057 KCNF1Q9H3M0 494 aa18.25■□□□□ 0.51
LRRTM1-201ENST00000295057 RIOK3O14730 519 aaKnown RBP18.25■□□□□ 0.51
LRRTM1-201ENST00000295057 KDM4AO75164 1064 aa18.25■□□□□ 0.51
LRRTM1-201ENST00000295057 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
LRRTM1-201ENST00000295057 PDCL2Q8N4E4 241 aa18.25■□□□□ 0.51
LRRTM1-201ENST00000295057 RILPL2Q969X0 211 aa18.25■□□□□ 0.51
LRRTM1-201ENST00000295057 WDR33Q9C0J8 1336 aaKnown RBP18.24■□□□□ 0.51
LRRTM1-201ENST00000295057 SIL1Q9H173 461 aa18.24■□□□□ 0.51
LRRTM1-201ENST00000295057 ZBTB3Q9H5J0 574 aa18.24■□□□□ 0.51
LRRTM1-201ENST00000295057 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
LRRTM1-201ENST00000295057 RPAP1Q9BWH6 1393 aaPredicted RBP18.24■□□□□ 0.51
LRRTM1-201ENST00000295057 TRIM6-TRIM34B2RNG4 842 aa18.24■□□□□ 0.51
LRRTM1-201ENST00000295057 DTNBO60941 627 aa18.24■□□□□ 0.51
LRRTM1-201ENST00000295057 MCCP23508 829 aa18.24■□□□□ 0.51
LRRTM1-201ENST00000295057 IL25Q9H293 177 aa18.24■□□□□ 0.51
LRRTM1-201ENST00000295057 COL22A1Q8NFW1 1626 aaPredicted RBP18.24■□□□□ 0.51
LRRTM1-201ENST00000295057 COL16A1Q07092 1604 aaPredicted RBP18.23■□□□□ 0.51
LRRTM1-201ENST00000295057 UBAP1LF5GYI3 381 aa18.23■□□□□ 0.51
LRRTM1-201ENST00000295057 UBE3BQ7Z3V4 1068 aa18.23■□□□□ 0.51
LRRTM1-201ENST00000295057 LARP6Q9BRS8 491 aaKnown RBP18.23■□□□□ 0.51
LRRTM1-201ENST00000295057 A0A0G2JS52 829 aa18.23■□□□□ 0.51
LRRTM1-201ENST00000295057 CHMLP26374 656 aa18.23■□□□□ 0.51
LRRTM1-201ENST00000295057 MTX1Q13505 466 aa18.23■□□□□ 0.51
LRRTM1-201ENST00000295057 GIMAP6Q6P9H5 292 aa18.23■□□□□ 0.51
LRRTM1-201ENST00000295057 KIAA1524Q8TCG1 905 aa18.23■□□□□ 0.51
LRRTM1-201ENST00000295057 TOGARAM1Q9Y4F4 1720 aa18.23■□□□□ 0.51
LRRTM1-201ENST00000295057 UTYO14607 1347 aa18.22■□□□□ 0.51
LRRTM1-201ENST00000295057 RAB11FIP3O75154 756 aa18.22■□□□□ 0.51
LRRTM1-201ENST00000295057 DNAJC10Q8IXB1 793 aa18.22■□□□□ 0.51
LRRTM1-201ENST00000295057 SPC24Q8NBT2 197 aa18.22■□□□□ 0.51
LRRTM1-201ENST00000295057 BCL11BQ9C0K0 894 aaPredicted RBP18.22■□□□□ 0.51
LRRTM1-201ENST00000295057 ATG3Q9NT62 314 aa18.22■□□□□ 0.51
LRRTM1-201ENST00000295057 KAT6BQ8WYB5 2073 aa18.22■□□□□ 0.51
LRRTM1-201ENST00000295057 KIF1BPQ96EK5 621 aa18.22■□□□□ 0.51
LRRTM1-201ENST00000295057 NAP1L2Q9ULW6 460 aaPredicted RBP18.21■□□□□ 0.51
LRRTM1-201ENST00000295057 ANAPC15P60006 121 aa18.21■□□□□ 0.51
LRRTM1-201ENST00000295057 PLBD2Q8NHP8 589 aa18.21■□□□□ 0.51
LRRTM1-201ENST00000295057 STAP2Q9UGK3 403 aa18.21■□□□□ 0.51
LRRTM1-201ENST00000295057 A0A087WZG4 1122 aa18.2■□□□□ 0.5
LRRTM1-201ENST00000295057 EXOC5O00471 708 aa18.2■□□□□ 0.5
LRRTM1-201ENST00000295057 TMEM87AQ8NBN3 555 aa18.2■□□□□ 0.5
LRRTM1-201ENST00000295057 PHLPP1O60346 1717 aa18.2■□□□□ 0.5
LRRTM1-201ENST00000295057 DISP2A7MBM2 1401 aa18.2■□□□□ 0.5
LRRTM1-201ENST00000295057 FIBPO43427 364 aa18.2■□□□□ 0.5
LRRTM1-201ENST00000295057 TMEM51Q9NW97 253 aa18.2■□□□□ 0.5
LRRTM1-201ENST00000295057 SLC4A9Q96Q91 983 aa18.19■□□□□ 0.5
LRRTM1-201ENST00000295057 FUCA2Q9BTY2 467 aa18.19■□□□□ 0.5
LRRTM1-201ENST00000295057 COL14A1Q05707 1796 aaKnown RBP18.19■□□□□ 0.5
LRRTM1-201ENST00000295057 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
LRRTM1-201ENST00000295057 ANKRD7Q92527 254 aa18.19■□□□□ 0.5
LRRTM1-201ENST00000295057 SASH1O94885 1247 aa18.18■□□□□ 0.5
LRRTM1-201ENST00000295057 UBE2HP62256 183 aa18.18■□□□□ 0.5
LRRTM1-201ENST00000295057 TAF3Q5VWG9 929 aa18.18■□□□□ 0.5
LRRTM1-201ENST00000295057 TNS2Q63HR2 1409 aa18.18■□□□□ 0.5
LRRTM1-201ENST00000295057 CCDC9Q9Y3X0 531 aaKnown RBP18.18■□□□□ 0.5
LRRTM1-201ENST00000295057 ZSCAN22P10073 491 aaPredicted RBP18.17■□□□□ 0.5
LRRTM1-201ENST00000295057 TUBGCP6Q96RT7 1819 aa18.17■□□□□ 0.5
LRRTM1-201ENST00000295057 ACSBG1Q96GR2 724 aa18.17■□□□□ 0.5
LRRTM1-201ENST00000295057 SYT1P21579 422 aa18.16■□□□□ 0.5
LRRTM1-201ENST00000295057 CCDC8Q9H0W5 538 aaPredicted RBP18.16■□□□□ 0.5
LRRTM1-201ENST00000295057 DIAPH3Q9NSV4 1193 aa18.16■□□□□ 0.5
LRRTM1-201ENST00000295057 UBR2Q8IWV8 1755 aa18.16■□□□□ 0.5
LRRTM1-201ENST00000295057 CHAF1AQ13111 956 aaPredicted RBP18.16■□□□□ 0.5
LRRTM1-201ENST00000295057 TLR7Q9NYK1 1049 aaKnown RBP18.16■□□□□ 0.5
LRRTM1-201ENST00000295057 SPATA31A1Q5TZJ5 1347 aa18.15■□□□□ 0.5
LRRTM1-201ENST00000295057 AACSQ86V21 672 aa18.15■□□□□ 0.5
LRRTM1-201ENST00000295057 CTIFO43310 598 aaKnown RBP18.15■□□□□ 0.5
LRRTM1-201ENST00000295057 STX6O43752 255 aa18.15■□□□□ 0.5
LRRTM1-201ENST00000295057 CASP7P55210 303 aa18.15■□□□□ 0.5
LRRTM1-201ENST00000295057 G3BP1Q13283 466 aaKnown RBP eCLIP18.15■□□□□ 0.5
LRRTM1-201ENST00000295057 HSP90AB4PQ58FF6 505 aa18.15■□□□□ 0.5
LRRTM1-201ENST00000295057 CLASRPQ8N2M8 674 aaKnown RBP18.15■□□□□ 0.5
LRRTM1-201ENST00000295057 EAF2Q96CJ1 260 aaPredicted RBP18.15■□□□□ 0.5
LRRTM1-201ENST00000295057 PAPPAQ13219 1627 aa18.14■□□□□ 0.49
LRRTM1-201ENST00000295057 PDIA4P13667 645 aaKnown RBP18.14■□□□□ 0.49
LRRTM1-201ENST00000295057 CHMP3Q9Y3E7 222 aa18.14■□□□□ 0.49
LRRTM1-201ENST00000295057 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.49
LRRTM1-201ENST00000295057 ARFGEF2Q9Y6D5 1785 aa18.14■□□□□ 0.49
LRRTM1-201ENST00000295057 F13A1P00488 732 aa18.13■□□□□ 0.49
LRRTM1-201ENST00000295057 PTGS1P23219 599 aa18.13■□□□□ 0.49
LRRTM1-201ENST00000295057 HSPA4P34932 840 aa18.13■□□□□ 0.49
LRRTM1-201ENST00000295057 LMBR1LQ6UX01 489 aa18.13■□□□□ 0.49
LRRTM1-201ENST00000295057 HDAC5Q9UQL6 1122 aa18.13■□□□□ 0.49
LRRTM1-201ENST00000295057 DNM1Q05193 864 aaKnown RBP18.13■□□□□ 0.49
LRRTM1-201ENST00000295057 NCBP1Q09161 790 aaKnown RBP18.13■□□□□ 0.49
LRRTM1-201ENST00000295057 DDB1Q16531 1140 aa18.13■□□□□ 0.49
LRRTM1-201ENST00000295057 IL17RAQ96F46 866 aa18.13■□□□□ 0.49
LRRTM1-201ENST00000295057 BCL9O00512 1426 aa18.12■□□□□ 0.49
LRRTM1-201ENST00000295057 IFIT2P09913 472 aaKnown RBP18.12■□□□□ 0.49
LRRTM1-201ENST00000295057 CPA1P15085 419 aa18.12■□□□□ 0.49
LRRTM1-201ENST00000295057 RFX5P48382 616 aaPredicted RBP18.12■□□□□ 0.49
LRRTM1-201ENST00000295057 AK2P54819 239 aa18.12■□□□□ 0.49
LRRTM1-201ENST00000295057 IPO4Q8TEX9 1081 aaKnown RBP18.12■□□□□ 0.49
LRRTM1-201ENST00000295057 PTPN12Q05209 780 aaKnown RBP18.12■□□□□ 0.49
LRRTM1-201ENST00000295057 RUFY3Q7L099 469 aa18.12■□□□□ 0.49
LRRTM1-201ENST00000295057 MARCH10Q8NA82 808 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms