RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 HAUS7Q99871 368 aa16.81■□□□□ 0.28
NXF1-201ENST00000294172 PUS3Q9BZE2 481 aaKnown RBP16.81■□□□□ 0.28
NXF1-201ENST00000294172 LMBRD1Q9NUN5 540 aa16.81■□□□□ 0.28
NXF1-201ENST00000294172 SLC27A2O14975 620 aa16.8■□□□□ 0.28
NXF1-201ENST00000294172 PRIM1P49642 420 aaKnown RBP16.8■□□□□ 0.28
NXF1-201ENST00000294172 KLHL40Q2TBA0 621 aa16.8■□□□□ 0.28
NXF1-201ENST00000294172 KCNB2Q92953 911 aa16.8■□□□□ 0.28
NXF1-201ENST00000294172 SLC4A9Q96Q91 983 aa16.8■□□□□ 0.28
NXF1-201ENST00000294172 ZSWIM6Q9HCJ5 1215 aa16.8■□□□□ 0.28
NXF1-201ENST00000294172 SNRKQ9NRH2 765 aa16.8■□□□□ 0.28
NXF1-201ENST00000294172 TJP1Q07157 1748 aa16.8■□□□□ 0.28
NXF1-201ENST00000294172 BCL9O00512 1426 aa16.8■□□□□ 0.28
NXF1-201ENST00000294172 HLFQ16534 295 aa16.8■□□□□ 0.28
NXF1-201ENST00000294172 MED23Q9ULK4 1368 aa16.8■□□□□ 0.28
NXF1-201ENST00000294172 VPS53Q5VIR6 699 aa16.79■□□□□ 0.28
NXF1-201ENST00000294172 TM6SF1Q9BZW5 370 aa16.79■□□□□ 0.28
NXF1-201ENST00000294172 MAP3K15Q6ZN16 1313 aa16.79■□□□□ 0.28
NXF1-201ENST00000294172 CYP19A1P11511 503 aaPredicted RBP16.79■□□□□ 0.28
NXF1-201ENST00000294172 TRIM28Q13263 835 aaKnown RBP16.79■□□□□ 0.28
NXF1-201ENST00000294172 FOXD4L6Q3SYB3 417 aaPredicted RBP16.79■□□□□ 0.28
NXF1-201ENST00000294172 RNF20Q5VTR2 975 aa16.79■□□□□ 0.28
NXF1-201ENST00000294172 FOXD4L3Q6VB84 417 aaPredicted RBP16.79■□□□□ 0.28
NXF1-201ENST00000294172 GOLIM4O00461 696 aa16.78■□□□□ 0.28
NXF1-201ENST00000294172 LARGE1O95461 756 aa16.78■□□□□ 0.28
NXF1-201ENST00000294172 PCCAP05165 728 aaPredicted RBP16.78■□□□□ 0.28
NXF1-201ENST00000294172 TAF7LQ5H9L4 462 aa16.78■□□□□ 0.28
NXF1-201ENST00000294172 SYNE4Q8N205 404 aa16.78■□□□□ 0.28
NXF1-201ENST00000294172 ZBTB1Q9Y2K1 713 aa16.78■□□□□ 0.28
NXF1-201ENST00000294172 A0A1B0GUL7 405 aa16.78■□□□□ 0.28
NXF1-201ENST00000294172 TAF5LO75529 589 aa16.78■□□□□ 0.28
NXF1-201ENST00000294172 CIAO1O76071 339 aa16.78■□□□□ 0.28
NXF1-201ENST00000294172 GIGYF2Q6Y7W6 1299 aaKnown RBP16.78■□□□□ 0.28
NXF1-201ENST00000294172 CCDC129Q6ZRS4 1044 aa16.78■□□□□ 0.28
NXF1-201ENST00000294172 ZBTB38Q8NAP3 1195 aaPredicted RBP16.78■□□□□ 0.28
NXF1-201ENST00000294172 SEC62Q99442 399 aaKnown RBP16.78■□□□□ 0.28
NXF1-201ENST00000294172 GPR108Q9NPR9 543 aa16.78■□□□□ 0.28
NXF1-201ENST00000294172 CEP126Q9P2H0 1117 aa16.78■□□□□ 0.28
NXF1-201ENST00000294172 ITGB4P16144 1822 aa16.77■□□□□ 0.28
NXF1-201ENST00000294172 NUTM2BA6NNL0 878 aaPredicted RBP16.77■□□□□ 0.28
NXF1-201ENST00000294172 NUTM2EB1AL46 878 aaPredicted RBP16.77■□□□□ 0.28
NXF1-201ENST00000294172 PSMA5P28066 241 aa16.77■□□□□ 0.28
NXF1-201ENST00000294172 MRE11P49959 708 aa16.77■□□□□ 0.28
NXF1-201ENST00000294172 NUTM2AQ8IVF1 878 aaPredicted RBP16.77■□□□□ 0.28
NXF1-201ENST00000294172 PANK2Q9BZ23 570 aa16.77■□□□□ 0.28
NXF1-201ENST00000294172 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.77■□□□□ 0.28
NXF1-201ENST00000294172 TAF6LQ9Y6J9 622 aa16.77■□□□□ 0.28
NXF1-201ENST00000294172 DTNBO60941 627 aa16.76■□□□□ 0.27
NXF1-201ENST00000294172 COL9A3Q14050 684 aaPredicted RBP16.76■□□□□ 0.27
NXF1-201ENST00000294172 CAVIN1Q6NZI2 390 aaKnown RBP16.76■□□□□ 0.27
NXF1-201ENST00000294172 GAS2L3Q86XJ1 694 aa16.76■□□□□ 0.27
NXF1-201ENST00000294172 CCDC83Q8IWF9 413 aa16.76■□□□□ 0.27
NXF1-201ENST00000294172 PAG1Q9NWQ8 432 aa16.76■□□□□ 0.27
NXF1-201ENST00000294172 COL16A1Q07092 1604 aaPredicted RBP16.76■□□□□ 0.27
NXF1-201ENST00000294172 KBTBD3Q8NAB2 608 aa16.76■□□□□ 0.27
NXF1-201ENST00000294172 TCEANC2Q96MN5 208 aa16.76■□□□□ 0.27
NXF1-201ENST00000294172 GRPEL1Q9HAV7 217 aa16.76■□□□□ 0.27
NXF1-201ENST00000294172 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
NXF1-201ENST00000294172 WDR33Q9C0J8 1336 aaKnown RBP16.75■□□□□ 0.27
NXF1-201ENST00000294172 IFIT5Q13325 482 aaKnown RBP16.75■□□□□ 0.27
NXF1-201ENST00000294172 MCMDC2Q4G0Z9 681 aa16.75■□□□□ 0.27
NXF1-201ENST00000294172 NLRP10Q86W26 655 aa16.75■□□□□ 0.27
NXF1-201ENST00000294172 TBC1D2BQ9UPU7 963 aa16.75■□□□□ 0.27
NXF1-201ENST00000294172 ZNF609O15014 1411 aa16.75■□□□□ 0.27
NXF1-201ENST00000294172 AHDC1Q5TGY3 1603 aaPredicted RBP16.75■□□□□ 0.27
NXF1-201ENST00000294172 IFIT1P09914 478 aaKnown RBP16.75■□□□□ 0.27
NXF1-201ENST00000294172 DDB1Q16531 1140 aa16.75■□□□□ 0.27
NXF1-201ENST00000294172 SLFNL1Q499Z3 407 aa16.75■□□□□ 0.27
NXF1-201ENST00000294172 BLOC1S2Q6QNY1 142 aa16.75■□□□□ 0.27
NXF1-201ENST00000294172 ACSBG1Q96GR2 724 aa16.75■□□□□ 0.27
NXF1-201ENST00000294172 GORABQ5T7V8 394 aa16.74■□□□□ 0.27
NXF1-201ENST00000294172 ZSCAN31Q96LW9 406 aaPredicted RBP16.74■□□□□ 0.27
NXF1-201ENST00000294172 RPAP1Q9BWH6 1393 aaPredicted RBP16.74■□□□□ 0.27
NXF1-201ENST00000294172 HSP90AB3PQ58FF7 597 aa16.74■□□□□ 0.27
NXF1-201ENST00000294172 GPT2Q8TD30 523 aa16.74■□□□□ 0.27
NXF1-201ENST00000294172 HMG20BQ9P0W2 317 aa16.74■□□□□ 0.27
NXF1-201ENST00000294172 ISY1Q9ULR0 285 aaKnown RBP16.74■□□□□ 0.27
NXF1-201ENST00000294172 SPATA31A1Q5TZJ5 1347 aa16.73■□□□□ 0.27
NXF1-201ENST00000294172 ME3Q16798 604 aa16.73■□□□□ 0.27
NXF1-201ENST00000294172 DZIP3Q86Y13 1208 aaKnown RBP16.73■□□□□ 0.27
NXF1-201ENST00000294172 NECAB1Q8N987 351 aa16.73■□□□□ 0.27
NXF1-201ENST00000294172 PLA2G12BQ9BX93 195 aa16.73■□□□□ 0.27
NXF1-201ENST00000294172 SH2B1Q9NRF2 756 aaPredicted RBP16.73■□□□□ 0.27
NXF1-201ENST00000294172 TRMT112Q9UI30 125 aaKnown RBP16.73■□□□□ 0.27
NXF1-201ENST00000294172 TPCN1Q9ULQ1 816 aa16.73■□□□□ 0.27
NXF1-201ENST00000294172 RFX7Q2KHR2 1363 aa16.73■□□□□ 0.27
NXF1-201ENST00000294172 CSF1RP07333 972 aa16.73■□□□□ 0.27
NXF1-201ENST00000294172 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
NXF1-201ENST00000294172 FKBP4Q02790 459 aaKnown RBP eCLIP16.73■□□□□ 0.27
NXF1-201ENST00000294172 COL22A1Q8NFW1 1626 aaPredicted RBP16.72■□□□□ 0.27
NXF1-201ENST00000294172 SYT1P21579 422 aa16.72■□□□□ 0.27
NXF1-201ENST00000294172 RPS6KB1P23443 525 aa16.72■□□□□ 0.27
NXF1-201ENST00000294172 ADORA1P30542 326 aa16.72■□□□□ 0.27
NXF1-201ENST00000294172 CDCA7Q9BWT1 371 aaPredicted RBP16.72■□□□□ 0.27
NXF1-201ENST00000294172 AKAP2Q9Y2D5 859 aa16.72■□□□□ 0.27
NXF1-201ENST00000294172 JCADQ9P266 1359 aa16.72■□□□□ 0.27
NXF1-201ENST00000294172 GJB2P29033 226 aa16.71■□□□□ 0.27
NXF1-201ENST00000294172 CCDC158Q5M9N0 1113 aa16.71■□□□□ 0.27
NXF1-201ENST00000294172 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
NXF1-201ENST00000294172 XAGE2Q96GT9 111 aa16.71■□□□□ 0.27
NXF1-201ENST00000294172 GREM2Q9H772 168 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms