RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 SBF2Q86WG5 1849 aa17.76■□□□□ 0.43
TTC9C-201ENST00000294161 CCDC171Q6TFL3 1326 aa17.76■□□□□ 0.43
TTC9C-201ENST00000294161 GPR108Q9NPR9 543 aa17.76■□□□□ 0.43
TTC9C-201ENST00000294161 ATG3Q9NT62 314 aa17.76■□□□□ 0.43
TTC9C-201ENST00000294161 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.76■□□□□ 0.43
TTC9C-201ENST00000294161 A1BGP04217 495 aa17.75■□□□□ 0.43
TTC9C-201ENST00000294161 PSMA5P28066 241 aa17.75■□□□□ 0.43
TTC9C-201ENST00000294161 LMBR1LQ6UX01 489 aa17.75■□□□□ 0.43
TTC9C-201ENST00000294161 BOLA2Q9H3K6 86 aa17.75■□□□□ 0.43
TTC9C-201ENST00000294161 CYP46A1Q9Y6A2 500 aa17.75■□□□□ 0.43
TTC9C-201ENST00000294161 WDR33Q9C0J8 1336 aaKnown RBP17.75■□□□□ 0.43
TTC9C-201ENST00000294161 STARD3NLO95772 234 aa17.75■□□□□ 0.43
TTC9C-201ENST00000294161 TFCP2Q12800 502 aa17.75■□□□□ 0.43
TTC9C-201ENST00000294161 VPS53Q5VIR6 699 aa17.75■□□□□ 0.43
TTC9C-201ENST00000294161 KLHDC4Q8TBB5 520 aa17.75■□□□□ 0.43
TTC9C-201ENST00000294161 BRPF3Q9ULD4 1205 aa17.75■□□□□ 0.43
TTC9C-201ENST00000294161 BRD1O95696 1058 aa17.74■□□□□ 0.43
TTC9C-201ENST00000294161 NMIQ13287 307 aaPredicted RBP17.74■□□□□ 0.43
TTC9C-201ENST00000294161 TTLL7Q6ZT98 887 aa17.74■□□□□ 0.43
TTC9C-201ENST00000294161 TTC14Q96N46 770 aa17.74■□□□□ 0.43
TTC9C-201ENST00000294161 SH2B1Q9NRF2 756 aaPredicted RBP17.74■□□□□ 0.43
TTC9C-201ENST00000294161 TLR7Q9NYK1 1049 aaKnown RBP17.74■□□□□ 0.43
TTC9C-201ENST00000294161 ASAP1Q9ULH1 1129 aa17.74■□□□□ 0.43
TTC9C-201ENST00000294161 NUP188Q5SRE5 1749 aa17.74■□□□□ 0.43
TTC9C-201ENST00000294161 CASTP20810 708 aaKnown RBP17.73■□□□□ 0.43
TTC9C-201ENST00000294161 IL15P40933 162 aaPredicted RBP17.73■□□□□ 0.43
TTC9C-201ENST00000294161 FOXO4P98177 505 aa17.73■□□□□ 0.43
TTC9C-201ENST00000294161 NECTIN1Q15223 517 aa17.73■□□□□ 0.43
TTC9C-201ENST00000294161 PRPF40BQ6NWY9 871 aaKnown RBP17.73■□□□□ 0.43
TTC9C-201ENST00000294161 KIF6Q6ZMV9 814 aa17.73■□□□□ 0.43
TTC9C-201ENST00000294161 MAP4K1Q92918 833 aa17.73■□□□□ 0.43
TTC9C-201ENST00000294161 HMG20BQ9P0W2 317 aa17.73■□□□□ 0.43
TTC9C-201ENST00000294161 CHMP3Q9Y3E7 222 aa17.73■□□□□ 0.43
TTC9C-201ENST00000294161 BCL9O00512 1426 aa17.73■□□□□ 0.43
TTC9C-201ENST00000294161 PDIA4P13667 645 aaKnown RBP17.72■□□□□ 0.43
TTC9C-201ENST00000294161 PTH1RQ03431 593 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 TRIM28Q13263 835 aaKnown RBP17.72■□□□□ 0.43
TTC9C-201ENST00000294161 NOL8Q76FK4 1167 aaKnown RBP17.72■□□□□ 0.43
TTC9C-201ENST00000294161 RASEFQ8IZ41 740 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 ZSWIM6Q9HCJ5 1215 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 PDRG1Q9NUG6 133 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 FBXO3Q9UK99 471 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 ZDHHC9Q9Y397 364 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 NHSQ6T4R5 1651 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 CIAO1O76071 339 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 TRIM37O94972 964 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 AK2P54819 239 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 JARID2Q92833 1246 aaPredicted RBP17.72■□□□□ 0.43
TTC9C-201ENST00000294161 JAKMIP1Q96N16 626 aaKnown RBP17.72■□□□□ 0.43
TTC9C-201ENST00000294161 GRPEL1Q9HAV7 217 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 LMBRD1Q9NUN5 540 aa17.72■□□□□ 0.43
TTC9C-201ENST00000294161 DBNLQ9UJU6 430 aaKnown RBP17.72■□□□□ 0.43
TTC9C-201ENST00000294161 RBM8AQ9Y5S9 174 aaKnown RBP17.72■□□□□ 0.43
TTC9C-201ENST00000294161 BTAF1O14981 1849 aa17.71■□□□□ 0.43
TTC9C-201ENST00000294161 MBD3O95983 291 aa17.71■□□□□ 0.43
TTC9C-201ENST00000294161 XRCC6P12956 609 aaKnown RBP eCLIP17.71■□□□□ 0.43
TTC9C-201ENST00000294161 TCIRG1Q13488 830 aa17.71■□□□□ 0.43
TTC9C-201ENST00000294161 PKP1Q13835 747 aa17.71■□□□□ 0.43
TTC9C-201ENST00000294161 ANKRD1Q15327 319 aa17.71■□□□□ 0.43
TTC9C-201ENST00000294161 HAUS7Q99871 368 aa17.71■□□□□ 0.43
TTC9C-201ENST00000294161 ZBTB3Q9H5J0 574 aa17.71■□□□□ 0.43
TTC9C-201ENST00000294161 CREB3L3Q68CJ9 461 aa17.7■□□□□ 0.42
TTC9C-201ENST00000294161 RUFY3Q7L099 469 aa17.7■□□□□ 0.42
TTC9C-201ENST00000294161 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
TTC9C-201ENST00000294161 ISCA1Q9BUE6 129 aa17.7■□□□□ 0.42
TTC9C-201ENST00000294161 MED23Q9ULK4 1368 aa17.7■□□□□ 0.42
TTC9C-201ENST00000294161 KRT32Q14532 448 aa17.7■□□□□ 0.42
TTC9C-201ENST00000294161 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.7■□□□□ 0.42
TTC9C-201ENST00000294161 EYA2O00167 538 aa17.69■□□□□ 0.42
TTC9C-201ENST00000294161 HSP90AB3PQ58FF7 597 aa17.69■□□□□ 0.42
TTC9C-201ENST00000294161 SMC3Q9UQE7 1217 aa17.69■□□□□ 0.42
TTC9C-201ENST00000294161 PRPF40AO75400 957 aaKnown RBP17.68■□□□□ 0.42
TTC9C-201ENST00000294161 NCLP19338 710 aaKnown RBP17.68■□□□□ 0.42
TTC9C-201ENST00000294161 KCNQ4P56696 695 aa17.68■□□□□ 0.42
TTC9C-201ENST00000294161 FAM196AQ6ZSG2 479 aa17.68■□□□□ 0.42
TTC9C-201ENST00000294161 ALDH8A1Q9H2A2 487 aaPredicted RBP17.68■□□□□ 0.42
TTC9C-201ENST00000294161 ATP6V1DQ9Y5K8 247 aa17.68■□□□□ 0.42
TTC9C-201ENST00000294161 SLC27A2O14975 620 aa17.68■□□□□ 0.42
TTC9C-201ENST00000294161 LRRFIP1Q32MZ4 808 aaKnown RBP17.68■□□□□ 0.42
TTC9C-201ENST00000294161 TSGA10IPQ3SY00 556 aa17.68■□□□□ 0.42
TTC9C-201ENST00000294161 DBNDD2Q9BQY9 259 aa17.68■□□□□ 0.42
TTC9C-201ENST00000294161 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
TTC9C-201ENST00000294161 A0A0D9SFI3 127 aa17.67■□□□□ 0.42
TTC9C-201ENST00000294161 PCCAP05165 728 aaPredicted RBP17.67■□□□□ 0.42
TTC9C-201ENST00000294161 ZNF445P59923 1031 aa17.67■□□□□ 0.42
TTC9C-201ENST00000294161 CCDC57Q2TAC2 916 aa17.67■□□□□ 0.42
TTC9C-201ENST00000294161 BLOC1S2Q6QNY1 142 aa17.67■□□□□ 0.42
TTC9C-201ENST00000294161 AKAP2Q9Y2D5 859 aa17.67■□□□□ 0.42
TTC9C-201ENST00000294161 TJP1Q07157 1748 aa17.67■□□□□ 0.42
TTC9C-201ENST00000294161 ATG9AQ7Z3C6 839 aa17.66■□□□□ 0.42
TTC9C-201ENST00000294161 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.66■□□□□ 0.42
TTC9C-201ENST00000294161 PLA2G12BQ9BX93 195 aa17.66■□□□□ 0.42
TTC9C-201ENST00000294161 MCMDC2Q4G0Z9 681 aa17.65■□□□□ 0.42
TTC9C-201ENST00000294161 KBTBD3Q8NAB2 608 aa17.65■□□□□ 0.42
TTC9C-201ENST00000294161 ANP32BQ92688 251 aaKnown RBP17.65■□□□□ 0.42
TTC9C-201ENST00000294161 SYAP1Q96A49 352 aaPredicted RBP17.65■□□□□ 0.42
TTC9C-201ENST00000294161 NEUROD6Q96NK8 337 aa17.65■□□□□ 0.42
TTC9C-201ENST00000294161 SLC4A9Q96Q91 983 aa17.65■□□□□ 0.42
TTC9C-201ENST00000294161 DNAJC2Q99543 621 aaKnown RBP17.65■□□□□ 0.42
TTC9C-201ENST00000294161 RTN4Q9NQC3 1192 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms