RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
CCDC58-201ENST00000291458 NLRP10Q86W26 655 aa12.62□□□□□ -0.39
CCDC58-201ENST00000291458 KIF3CO14782 793 aa12.61□□□□□ -0.39
CCDC58-201ENST00000291458 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
CCDC58-201ENST00000291458 RIC3Q7Z5B4 369 aa12.61□□□□□ -0.39
CCDC58-201ENST00000291458 PLBD2Q8NHP8 589 aa12.61□□□□□ -0.39
CCDC58-201ENST00000291458 ZNF277Q9NRM2 450 aaPredicted RBP12.61□□□□□ -0.39
CCDC58-201ENST00000291458 HYPKQ9NX55 129 aa12.61□□□□□ -0.39
CCDC58-201ENST00000291458 TRMT112Q9UI30 125 aaKnown RBP12.61□□□□□ -0.39
CCDC58-201ENST00000291458 RIC1Q4ADV7 1423 aa12.61□□□□□ -0.39
CCDC58-201ENST00000291458 KDM2BQ8NHM5 1336 aa12.61□□□□□ -0.39
CCDC58-201ENST00000291458 FANCIQ9NVI1 1328 aa12.61□□□□□ -0.39
CCDC58-201ENST00000291458 PPEF1O14829 653 aaPredicted RBP12.6□□□□□ -0.39
CCDC58-201ENST00000291458 ANKRD13DQ6ZTN6 518 aa12.6□□□□□ -0.39
CCDC58-201ENST00000291458 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
CCDC58-201ENST00000291458 RBM17Q96I25 401 aaKnown RBP12.6□□□□□ -0.39
CCDC58-201ENST00000291458 MYD88Q99836 296 aa12.6□□□□□ -0.39
CCDC58-201ENST00000291458 RRAGCQ9HB90 399 aa12.6□□□□□ -0.39
CCDC58-201ENST00000291458 SH3TC1Q8TE82 1336 aa12.6□□□□□ -0.39
CCDC58-201ENST00000291458 KLRG2A4D1S0 409 aaPredicted RBP12.59□□□□□ -0.39
CCDC58-201ENST00000291458 CCDC27Q2M243 656 aa12.59□□□□□ -0.39
CCDC58-201ENST00000291458 TWISTNBQ3B726 338 aaPredicted RBP12.59□□□□□ -0.39
CCDC58-201ENST00000291458 CRY2Q49AN0 593 aa12.59□□□□□ -0.39
CCDC58-201ENST00000291458 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
CCDC58-201ENST00000291458 CCDC30Q5VVM6 783 aa12.59□□□□□ -0.39
CCDC58-201ENST00000291458 JARID2Q92833 1246 aaPredicted RBP12.59□□□□□ -0.39
CCDC58-201ENST00000291458 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
CCDC58-201ENST00000291458 TRPC6Q9Y210 931 aa12.59□□□□□ -0.39
CCDC58-201ENST00000291458 ABCC4O15439 1325 aa12.59□□□□□ -0.39
CCDC58-201ENST00000291458 SPEF2Q9C093 1822 aa12.58□□□□□ -0.4
CCDC58-201ENST00000291458 ALDH1B1P30837 517 aa12.58□□□□□ -0.4
CCDC58-201ENST00000291458 PSEN1P49768 467 aa12.58□□□□□ -0.4
CCDC58-201ENST00000291458 FAM89AQ96GI7 184 aa12.58□□□□□ -0.4
CCDC58-201ENST00000291458 STK31Q9BXU1 1019 aa12.58□□□□□ -0.4
CCDC58-201ENST00000291458 COL4A1P02462 1669 aa12.57□□□□□ -0.4
CCDC58-201ENST00000291458 FKBP4Q02790 459 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCDC58-201ENST00000291458 C7orf43Q8WVR3 580 aa12.57□□□□□ -0.4
CCDC58-201ENST00000291458 DCBLD2Q96PD2 775 aa12.57□□□□□ -0.4
CCDC58-201ENST00000291458 LTBP3Q9NS15 1303 aa12.57□□□□□ -0.4
CCDC58-201ENST00000291458 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
CCDC58-201ENST00000291458 G2E3Q7L622 706 aa12.56□□□□□ -0.4
CCDC58-201ENST00000291458 CCDC85AQ96PX6 553 aaPredicted RBP12.56□□□□□ -0.4
CCDC58-201ENST00000291458 ISCA1Q9BUE6 129 aa12.56□□□□□ -0.4
CCDC58-201ENST00000291458 MAP3K2Q9Y2U5 619 aa12.56□□□□□ -0.4
CCDC58-201ENST00000291458 COL4A5P29400 1685 aa12.56□□□□□ -0.4
CCDC58-201ENST00000291458 IL16Q14005 1332 aa12.56□□□□□ -0.4
CCDC58-201ENST00000291458 ZNF541Q9H0D2 1346 aa12.56□□□□□ -0.4
CCDC58-201ENST00000291458 WDR90Q96KV7 1748 aa12.55□□□□□ -0.4
CCDC58-201ENST00000291458 GLTPD2A6NH11 291 aa12.55□□□□□ -0.4
CCDC58-201ENST00000291458 DDX58O95786 925 aaKnown RBP12.55□□□□□ -0.4
CCDC58-201ENST00000291458 HOXA10P31260 410 aaPredicted RBP12.55□□□□□ -0.4
CCDC58-201ENST00000291458 RTKN2Q8IZC4 609 aa12.55□□□□□ -0.4
CCDC58-201ENST00000291458 RNF123Q5XPI4 1314 aa12.55□□□□□ -0.4
CCDC58-201ENST00000291458 ZC3H4Q9UPT8 1303 aaKnown RBP12.55□□□□□ -0.4
CCDC58-201ENST00000291458 IRS4O14654 1257 aaPredicted RBP12.54□□□□□ -0.4
CCDC58-201ENST00000291458 DDNO94850 711 aaPredicted RBP12.54□□□□□ -0.4
CCDC58-201ENST00000291458 IARSP41252 1262 aaKnown RBP12.54□□□□□ -0.4
CCDC58-201ENST00000291458 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
CCDC58-201ENST00000291458 DDX46Q7L014 1031 aaKnown RBP12.54□□□□□ -0.4
CCDC58-201ENST00000291458 CRAMP1Q96RY5 1269 aa12.54□□□□□ -0.4
CCDC58-201ENST00000291458 BMP2KQ9NSY1 1161 aaPredicted RBP12.54□□□□□ -0.4
CCDC58-201ENST00000291458 MYH3P11055 1940 aa12.54□□□□□ -0.4
CCDC58-201ENST00000291458 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
CCDC58-201ENST00000291458 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
CCDC58-201ENST00000291458 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.53□□□□□ -0.4
CCDC58-201ENST00000291458 PI4KAP2A4QPH2 592 aa12.53□□□□□ -0.4
CCDC58-201ENST00000291458 TOMM70O94826 608 aa12.53□□□□□ -0.4
CCDC58-201ENST00000291458 SLC10A5Q5PT55 438 aa12.53□□□□□ -0.4
CCDC58-201ENST00000291458 ASTLQ6HA08 431 aaPredicted RBP12.53□□□□□ -0.4
CCDC58-201ENST00000291458 WDR63Q8IWG1 891 aa12.53□□□□□ -0.4
CCDC58-201ENST00000291458 LARGE2Q8N3Y3 721 aa12.53□□□□□ -0.4
CCDC58-201ENST00000291458 PI4KAP1Q8N8J0 262 aa12.53□□□□□ -0.4
CCDC58-201ENST00000291458 ZFP91Q96JP5 570 aaPredicted RBP12.53□□□□□ -0.4
CCDC58-201ENST00000291458 METTL22Q9BUU2 404 aaPredicted RBP12.53□□□□□ -0.4
CCDC58-201ENST00000291458 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
CCDC58-201ENST00000291458 TMX4Q9H1E5 349 aaPredicted RBP12.53□□□□□ -0.4
CCDC58-201ENST00000291458 CACNA1FO60840 1977 aa12.52□□□□□ -0.4
CCDC58-201ENST00000291458 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
CCDC58-201ENST00000291458 PPIP5K2O43314 1243 aa12.52□□□□□ -0.41
CCDC58-201ENST00000291458 HSPA6P17066 643 aa12.52□□□□□ -0.41
CCDC58-201ENST00000291458 FLIIQ13045 1269 aa12.52□□□□□ -0.41
CCDC58-201ENST00000291458 FKBP5Q13451 457 aaPredicted RBP12.52□□□□□ -0.41
CCDC58-201ENST00000291458 GRAPQ13588 217 aa12.52□□□□□ -0.41
CCDC58-201ENST00000291458 AOC3Q16853 763 aa12.52□□□□□ -0.41
CCDC58-201ENST00000291458 CWF19L2Q2TBE0 894 aaKnown RBP12.52□□□□□ -0.41
CCDC58-201ENST00000291458 GRAPLQ8TC17 118 aaPredicted RBP12.52□□□□□ -0.41
CCDC58-201ENST00000291458 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.41
CCDC58-201ENST00000291458 CWC25Q9NXE8 425 aaPredicted RBP12.52□□□□□ -0.41
CCDC58-201ENST00000291458 ATMINO43313 823 aaPredicted RBP12.51□□□□□ -0.41
CCDC58-201ENST00000291458 NEXNQ0ZGT2 675 aa12.51□□□□□ -0.41
CCDC58-201ENST00000291458 KSR2Q6VAB6 950 aa12.51□□□□□ -0.41
CCDC58-201ENST00000291458 RBM46Q8TBY0 533 aaKnown RBP12.51□□□□□ -0.41
CCDC58-201ENST00000291458 JDP2Q8WYK2 163 aa12.51□□□□□ -0.41
CCDC58-201ENST00000291458 CELF1Q92879 486 aaKnown RBP12.51□□□□□ -0.41
CCDC58-201ENST00000291458 ATP6V0A2Q9Y487 856 aa12.51□□□□□ -0.41
CCDC58-201ENST00000291458 GJA3Q9Y6H8 435 aa12.51□□□□□ -0.41
CCDC58-201ENST00000291458 DUOX1Q9NRD9 1551 aa12.51□□□□□ -0.41
CCDC58-201ENST00000291458 VEGFAP15692 232 aaPredicted RBP12.5□□□□□ -0.41
CCDC58-201ENST00000291458 HTRA3P83110 453 aa12.5□□□□□ -0.41
CCDC58-201ENST00000291458 EAPPQ56P03 285 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms