RNA–Protein interactions for RNA: ENST00000288368.4

PREX2-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX2, Length 10,750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-201ENST00000288368 ZBTB3Q9H5J0 574 aa12.67□□□□□ -0.38
PREX2-201ENST00000288368 TBC1D9Q6ZT07 1266 aa12.67□□□□□ -0.38
PREX2-201ENST00000288368 SYCP2Q9BX26 1530 aa12.67□□□□□ -0.38
PREX2-201ENST00000288368 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
PREX2-201ENST00000288368 NEMFO60524 1076 aa12.67□□□□□ -0.38
PREX2-201ENST00000288368 ACTN2P35609 894 aa12.67□□□□□ -0.38
PREX2-201ENST00000288368 USP25Q9UHP3 1055 aa12.67□□□□□ -0.38
PREX2-201ENST00000288368 GCC2Q8IWJ2 1684 aa12.67□□□□□ -0.38
PREX2-201ENST00000288368 NSD2O96028 1365 aa12.67□□□□□ -0.38
PREX2-201ENST00000288368 PANK2Q9BZ23 570 aa12.66□□□□□ -0.38
PREX2-201ENST00000288368 DDX19AQ9NUU7 478 aaKnown RBP12.66□□□□□ -0.38
PREX2-201ENST00000288368 DBF4Q9UBU7 674 aaPredicted RBP12.66□□□□□ -0.38
PREX2-201ENST00000288368 FANCAO15360 1455 aa12.66□□□□□ -0.38
PREX2-201ENST00000288368 HSF2BPO75031 334 aa12.66□□□□□ -0.38
PREX2-201ENST00000288368 CCDC172P0C7W6 258 aa12.66□□□□□ -0.38
PREX2-201ENST00000288368 C20orf194Q5TEA3 1177 aa12.66□□□□□ -0.38
PREX2-201ENST00000288368 RMND1Q9NWS8 449 aa12.66□□□□□ -0.38
PREX2-201ENST00000288368 HMG20BQ9P0W2 317 aa12.66□□□□□ -0.38
PREX2-201ENST00000288368 IFI16Q16666 785 aaKnown RBP12.66□□□□□ -0.38
PREX2-201ENST00000288368 CEP135Q66GS9 1140 aa12.66□□□□□ -0.38
PREX2-201ENST00000288368 ZNF622Q969S3 477 aaKnown RBP eCLIP12.66□□□□□ -0.38
PREX2-201ENST00000288368 USP16Q9Y5T5 823 aa12.65□□□□□ -0.38
PREX2-201ENST00000288368 NCOA7Q8NI08 942 aa12.65□□□□□ -0.38
PREX2-201ENST00000288368 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.38
PREX2-201ENST00000288368 ABCC1P33527 1531 aa12.65□□□□□ -0.38
PREX2-201ENST00000288368 TRIM27P14373 513 aa12.65□□□□□ -0.38
PREX2-201ENST00000288368 C6orf163Q5TEZ5 329 aa12.65□□□□□ -0.38
PREX2-201ENST00000288368 FLIIQ13045 1269 aa12.65□□□□□ -0.38
PREX2-201ENST00000288368 KANK3Q6NY19 840 aa12.65□□□□□ -0.38
PREX2-201ENST00000288368 UBA7P41226 1012 aa12.65□□□□□ -0.38
PREX2-201ENST00000288368 MRVI1Q9Y6F6 885 aa12.65□□□□□ -0.38
PREX2-201ENST00000288368 RFC4P35249 363 aa12.65□□□□□ -0.38
PREX2-201ENST00000288368 KDM5BQ9UGL1 1544 aa12.65□□□□□ -0.38
PREX2-201ENST00000288368 MCM5P33992 734 aa12.65□□□□□ -0.39
PREX2-201ENST00000288368 SMARCC1Q92922 1105 aaPredicted RBP12.65□□□□□ -0.39
PREX2-201ENST00000288368 IQCGQ9H095 443 aaKnown RBP12.65□□□□□ -0.39
PREX2-201ENST00000288368 GOLGA6L9A6NEM1 432 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 CCDC152Q4G0S7 254 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 IFIT1BQ5T764 474 aaKnown RBP12.64□□□□□ -0.39
PREX2-201ENST00000288368 CABP5Q9NP86 173 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 EMILIN1Q9Y6C2 1016 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 ATP5J2-PTCD1G3V325 749 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 VTI1AQ96AJ9 217 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 APBB1IPQ7Z5R6 666 aaPredicted RBP12.64□□□□□ -0.39
PREX2-201ENST00000288368 DDX12PQ92771 950 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 LRRC45Q96CN5 670 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
PREX2-201ENST00000288368 TMEM110-MUSTN1A8MSY1 372 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 CALM1P0DP23 149 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 CALM2P0DP24 149 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 CALM3P0DP25 149 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 TERF1P54274 439 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 MAST1Q9Y2H9 1570 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 KRT13P13646 458 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 SNRKQ9NRH2 765 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
PREX2-201ENST00000288368 SYKP43405 635 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 GDPD2Q9HCC8 539 aa12.64□□□□□ -0.39
PREX2-201ENST00000288368 LRRC27Q9C0I9 530 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 PHACTR2O75167 634 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 WTAPQ15007 396 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 GRM1Q13255 1194 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 GJC1P36383 396 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 UBE2HP62256 183 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 MXRA7P84157 204 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 DUOX2Q9NRD8 1548 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 AFMP43652 599 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 GSTA5Q7RTV2 222 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 KRT23Q9C075 422 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 WDR70Q9NW82 654 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 KIAA0753Q2KHM9 967 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 TTC22Q5TAA0 569 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 ZNF804AQ7Z570 1209 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 CCDC50Q8IVM0 306 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 ANKS4BQ8N8V4 417 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 GTF2F1P35269 517 aaKnown RBP eCLIP12.63□□□□□ -0.39
PREX2-201ENST00000288368 RRAGBQ5VZM2 374 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 PLVAPQ9BX97 442 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 ECHDC1Q9NTX5 307 aa12.63□□□□□ -0.39
PREX2-201ENST00000288368 DPH6Q7L8W6 267 aa12.62□□□□□ -0.39
PREX2-201ENST00000288368 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
PREX2-201ENST00000288368 NSRP1Q9H0G5 558 aaKnown RBP12.62□□□□□ -0.39
PREX2-201ENST00000288368 RAB3IL1Q8TBN0 382 aa12.62□□□□□ -0.39
PREX2-201ENST00000288368 KIF4AO95239 1232 aa12.62□□□□□ -0.39
PREX2-201ENST00000288368 PLB1Q6P1J6 1458 aa12.62□□□□□ -0.39
PREX2-201ENST00000288368 ZSWIM4Q9H7M6 989 aa12.62□□□□□ -0.39
PREX2-201ENST00000288368 STX8Q9UNK0 236 aa12.62□□□□□ -0.39
PREX2-201ENST00000288368 EEF2P13639 858 aaKnown RBP12.62□□□□□ -0.39
PREX2-201ENST00000288368 CCDC155Q8N6L0 562 aa12.62□□□□□ -0.39
PREX2-201ENST00000288368 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
PREX2-201ENST00000288368 N4BP3O15049 544 aa12.62□□□□□ -0.39
PREX2-201ENST00000288368 CCDC102BQ68D86 513 aa12.62□□□□□ -0.39
PREX2-201ENST00000288368 PPIP5K1Q6PFW1 1433 aa12.61□□□□□ -0.39
PREX2-201ENST00000288368 CTAGE9A4FU28 777 aa12.61□□□□□ -0.39
PREX2-201ENST00000288368 F8W031 263 aaPredicted RBP12.61□□□□□ -0.39
PREX2-201ENST00000288368 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
PREX2-201ENST00000288368 RTN1Q16799 776 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms