RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 HNRNPUQ00839 825 aaKnown RBP eCLIP11.47□□□□□ -0.57
PDCD4-201ENST00000280154 FAM13BQ9NYF5 915 aa11.47□□□□□ -0.57
PDCD4-201ENST00000280154 WWC3Q9ULE0 1092 aa11.47□□□□□ -0.57
PDCD4-201ENST00000280154 LRRC37AA6NMS7 1700 aa11.47□□□□□ -0.57
PDCD4-201ENST00000280154 NAT2P11245 290 aa11.47□□□□□ -0.57
PDCD4-201ENST00000280154 ZNF790Q6PG37 636 aa11.47□□□□□ -0.57
PDCD4-201ENST00000280154 PIGBQ92521 554 aa11.47□□□□□ -0.57
PDCD4-201ENST00000280154 TRIM44Q96DX7 344 aaPredicted RBP11.47□□□□□ -0.57
PDCD4-201ENST00000280154 KLF15Q9UIH9 416 aa11.47□□□□□ -0.57
PDCD4-201ENST00000280154 CNTNAP4Q9C0A0 1308 aa11.47□□□□□ -0.57
PDCD4-201ENST00000280154 PDIA6Q15084 440 aa11.47□□□□□ -0.57
PDCD4-201ENST00000280154 MCM10Q7L590 875 aa11.47□□□□□ -0.57
PDCD4-201ENST00000280154 ZC3H15Q8WU90 426 aaKnown RBP11.47□□□□□ -0.57
PDCD4-201ENST00000280154 MKRN1Q9UHC7 482 aaKnown RBP11.47□□□□□ -0.57
PDCD4-201ENST00000280154 ELL2O00472 640 aaPredicted RBP11.46□□□□□ -0.57
PDCD4-201ENST00000280154 GIGYF1O75420 1035 aaPredicted RBP11.46□□□□□ -0.57
PDCD4-201ENST00000280154 ZRSR2Q15696 482 aaKnown RBP11.46□□□□□ -0.57
PDCD4-201ENST00000280154 PRPF38AQ8NAV1 312 aaKnown RBP11.46□□□□□ -0.57
PDCD4-201ENST00000280154 MYH3P11055 1940 aa11.46□□□□□ -0.57
PDCD4-201ENST00000280154 RXRBP28702 533 aa11.46□□□□□ -0.58
PDCD4-201ENST00000280154 FAM98CQ17RN3 349 aaKnown RBP11.46□□□□□ -0.58
PDCD4-201ENST00000280154 CDCA7LQ96GN5 454 aa11.46□□□□□ -0.58
PDCD4-201ENST00000280154 TDO2P48775 406 aa11.46□□□□□ -0.58
PDCD4-201ENST00000280154 FAM196AQ6ZSG2 479 aa11.46□□□□□ -0.58
PDCD4-201ENST00000280154 SLC4A9Q96Q91 983 aa11.46□□□□□ -0.58
PDCD4-201ENST00000280154 RC3H1Q5TC82 1133 aaKnown RBP11.45□□□□□ -0.58
PDCD4-201ENST00000280154 RPAINQ86UA6 219 aa11.45□□□□□ -0.58
PDCD4-201ENST00000280154 RBM5P52756 815 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDCD4-201ENST00000280154 METTL14Q9HCE5 456 aaKnown RBP11.45□□□□□ -0.58
PDCD4-201ENST00000280154 TRIM6-TRIM34B2RNG4 842 aa11.45□□□□□ -0.58
PDCD4-201ENST00000280154 HMGB2P26583 209 aaKnown RBP11.45□□□□□ -0.58
PDCD4-201ENST00000280154 NEXNQ0ZGT2 675 aa11.45□□□□□ -0.58
PDCD4-201ENST00000280154 TRIM34Q9BYJ4 488 aa11.45□□□□□ -0.58
PDCD4-201ENST00000280154 RARSP54136 660 aaKnown RBP11.44□□□□□ -0.58
PDCD4-201ENST00000280154 BIRC2Q13490 618 aa11.44□□□□□ -0.58
PDCD4-201ENST00000280154 KRT27Q7Z3Y8 459 aa11.44□□□□□ -0.58
PDCD4-201ENST00000280154 MPRIPQ6WCQ1 1025 aa11.43□□□□□ -0.58
PDCD4-201ENST00000280154 MYCBPQ99417 103 aaPredicted RBP11.43□□□□□ -0.58
PDCD4-201ENST00000280154 KCNJ4P48050 445 aa11.43□□□□□ -0.58
PDCD4-201ENST00000280154 RTF1Q92541 710 aaKnown RBP11.43□□□□□ -0.58
PDCD4-201ENST00000280154 RRP7AQ9Y3A4 280 aaKnown RBP11.43□□□□□ -0.58
PDCD4-201ENST00000280154 ABCC4O15439 1325 aa11.43□□□□□ -0.58
PDCD4-201ENST00000280154 ARAP2Q8WZ64 1704 aa11.43□□□□□ -0.58
PDCD4-201ENST00000280154 CC2D1AQ6P1N0 951 aaPredicted RBP11.43□□□□□ -0.58
PDCD4-201ENST00000280154 MRPL50Q8N5N7 158 aaKnown RBP11.43□□□□□ -0.58
PDCD4-201ENST00000280154 SMARCC1Q92922 1105 aaPredicted RBP11.43□□□□□ -0.58
PDCD4-201ENST00000280154 RFX1P22670 979 aa11.42□□□□□ -0.58
PDCD4-201ENST00000280154 DCTN1Q14203 1278 aa11.42□□□□□ -0.58
PDCD4-201ENST00000280154 C8orf58Q8NAV2 365 aa11.42□□□□□ -0.58
PDCD4-201ENST00000280154 TEX13AQ9BXU3 409 aaPredicted RBP11.42□□□□□ -0.58
PDCD4-201ENST00000280154 KDM4CQ9H3R0 1056 aa11.42□□□□□ -0.58
PDCD4-201ENST00000280154 BRCA1P38398 1863 aaKnown RBP11.42□□□□□ -0.58
PDCD4-201ENST00000280154 LTBP1Q14766 1721 aa11.42□□□□□ -0.58
PDCD4-201ENST00000280154 SLC27A3Q5K4L6 730 aa11.42□□□□□ -0.58
PDCD4-201ENST00000280154 LMBRD2Q68DH5 695 aaPredicted RBP11.42□□□□□ -0.58
PDCD4-201ENST00000280154 UHMK1Q8TAS1 419 aaKnown RBP11.42□□□□□ -0.58
PDCD4-201ENST00000280154 PALLDQ8WX93 1383 aa11.42□□□□□ -0.58
PDCD4-201ENST00000280154 NFATC2IPQ8NCF5 419 aa11.42□□□□□ -0.58
PDCD4-201ENST00000280154 TSPAN18Q96SJ8 248 aa11.42□□□□□ -0.58
PDCD4-201ENST00000280154 PAIP2Q9BPZ3 127 aaKnown RBP11.42□□□□□ -0.58
PDCD4-201ENST00000280154 PTPRCP08575 1304 aa11.42□□□□□ -0.58
PDCD4-201ENST00000280154 BTBD11A6QL63 1104 aa11.41□□□□□ -0.58
PDCD4-201ENST00000280154 MPHOSPH6Q99547 160 aaKnown RBP11.41□□□□□ -0.58
PDCD4-201ENST00000280154 THUMPD2Q9BTF0 503 aaKnown RBP11.41□□□□□ -0.58
PDCD4-201ENST00000280154 C9orf131Q5VYM1 1079 aa11.41□□□□□ -0.58
PDCD4-201ENST00000280154 CCDC34Q96HJ3 373 aa11.41□□□□□ -0.58
PDCD4-201ENST00000280154 KIAA1522Q9P206 1035 aaPredicted RBP11.41□□□□□ -0.58
PDCD4-201ENST00000280154 TPX2Q9ULW0 747 aaKnown RBP11.41□□□□□ -0.58
PDCD4-201ENST00000280154 SATB1Q01826 763 aa11.41□□□□□ -0.58
PDCD4-201ENST00000280154 POM121Q96HA1 1249 aa11.41□□□□□ -0.58
PDCD4-201ENST00000280154 UTYO14607 1347 aa11.41□□□□□ -0.58
PDCD4-201ENST00000280154 ANKRD31Q8N7Z5 1873 aa11.4□□□□□ -0.58
PDCD4-201ENST00000280154 RRM1P23921 792 aa11.4□□□□□ -0.58
PDCD4-201ENST00000280154 MRRFQ96E11 262 aaKnown RBP11.4□□□□□ -0.58
PDCD4-201ENST00000280154 CYP19A1P11511 503 aaPredicted RBP11.4□□□□□ -0.58
PDCD4-201ENST00000280154 ENOX2Q16206 610 aaKnown RBP11.4□□□□□ -0.58
PDCD4-201ENST00000280154 MORC4Q8TE76 937 aa11.4□□□□□ -0.58
PDCD4-201ENST00000280154 FMNL2Q96PY5 1086 aa11.4□□□□□ -0.58
PDCD4-201ENST00000280154 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
PDCD4-201ENST00000280154 CALRP27797 417 aaKnown RBP11.4□□□□□ -0.59
PDCD4-201ENST00000280154 ANP32AP39687 249 aaKnown RBP11.4□□□□□ -0.59
PDCD4-201ENST00000280154 ABL2P42684 1182 aa11.4□□□□□ -0.59
PDCD4-201ENST00000280154 TSPYL6Q8N831 410 aa11.4□□□□□ -0.59
PDCD4-201ENST00000280154 NAT1P18440 290 aa11.39□□□□□ -0.59
PDCD4-201ENST00000280154 CABP4P57796 275 aa11.39□□□□□ -0.59
PDCD4-201ENST00000280154 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.39□□□□□ -0.59
PDCD4-201ENST00000280154 KCNQ3O43525 872 aa11.39□□□□□ -0.59
PDCD4-201ENST00000280154 SNRPA1P09661 255 aaKnown RBP11.39□□□□□ -0.59
PDCD4-201ENST00000280154 EXOSC9Q06265 439 aaKnown RBP11.39□□□□□ -0.59
PDCD4-201ENST00000280154 C16orf87Q6PH81 154 aa11.39□□□□□ -0.59
PDCD4-201ENST00000280154 TMOD3Q9NYL9 352 aa11.39□□□□□ -0.59
PDCD4-201ENST00000280154 ZNF646O15015 1829 aaPredicted RBP11.39□□□□□ -0.59
PDCD4-201ENST00000280154 ADCY9O60503 1353 aa11.39□□□□□ -0.59
PDCD4-201ENST00000280154 INTS5Q6P9B9 1019 aaKnown RBP11.39□□□□□ -0.59
PDCD4-201ENST00000280154 ZNF496Q96IT1 587 aaPredicted RBP11.39□□□□□ -0.59
PDCD4-201ENST00000280154 PDILTQ8N807 584 aa11.38□□□□□ -0.59
PDCD4-201ENST00000280154 TSPYL4Q9UJ04 414 aa11.38□□□□□ -0.59
PDCD4-201ENST00000280154 CEP120Q8N960 986 aa11.38□□□□□ -0.59
PDCD4-201ENST00000280154 CAMKK2Q96RR4 588 aa11.38□□□□□ -0.59
PDCD4-201ENST00000280154 NRDCO43847 1150 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms