RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 RAD50Q92878 1312 aa8.98□□□□□ -0.97
TRIM6-201ENST00000278302 POLR3GO15318 223 aaPredicted RBP8.98□□□□□ -0.97
TRIM6-201ENST00000278302 TPM3P06753 285 aa8.98□□□□□ -0.97
TRIM6-201ENST00000278302 CHRM1P11229 460 aaPredicted RBP8.98□□□□□ -0.97
TRIM6-201ENST00000278302 MYL6BP14649 208 aa8.98□□□□□ -0.97
TRIM6-201ENST00000278302 SLC39A6Q13433 755 aa8.98□□□□□ -0.97
TRIM6-201ENST00000278302 CAMK4Q16566 473 aa8.98□□□□□ -0.97
TRIM6-201ENST00000278302 LSG1Q9H089 658 aaKnown RBP8.98□□□□□ -0.97
TRIM6-201ENST00000278302 KDM3BQ7LBC6 1761 aa8.98□□□□□ -0.97
TRIM6-201ENST00000278302 N4BP2Q86UW6 1770 aaPredicted RBP8.98□□□□□ -0.97
TRIM6-201ENST00000278302 GRM8O00222 908 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 MTX1Q13505 466 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 LINS1Q8NG48 757 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 DDX21Q9NR30 783 aaKnown RBP eCLIP8.97□□□□□ -0.97
TRIM6-201ENST00000278302 PAXBP1Q9Y5B6 917 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 NPHP4O75161 1426 aaPredicted RBP8.97□□□□□ -0.97
TRIM6-201ENST00000278302 NCAPD2Q15021 1401 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 PXDNQ92626 1479 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 MED1Q15648 1581 aaPredicted RBP8.97□□□□□ -0.97
TRIM6-201ENST00000278302 TUBGCP6Q96RT7 1819 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 WDR33Q9C0J8 1336 aaKnown RBP8.97□□□□□ -0.97
TRIM6-201ENST00000278302 LOC102724159A0A0B4J2E5 919 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 CSB-PGBD3P0DP91 1061 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 NEXNQ0ZGT2 675 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 PWP2Q15269 919 aaKnown RBP8.97□□□□□ -0.97
TRIM6-201ENST00000278302 ZSCAN25Q6NSZ9 544 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 KLHL34Q8N239 644 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 LMO7Q8WWI1 1683 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 CASTP20810 708 aaKnown RBP8.97□□□□□ -0.97
TRIM6-201ENST00000278302 AK2P54819 239 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 RASEFQ8IZ41 740 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 NFATC2IPQ8NCF5 419 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 CACTINQ8WUQ7 758 aaKnown RBP8.97□□□□□ -0.97
TRIM6-201ENST00000278302 SUCLG2Q96I99 432 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 CCDC8Q9H0W5 538 aaPredicted RBP8.97□□□□□ -0.97
TRIM6-201ENST00000278302 SIL1Q9H173 461 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 LIMCH1Q9UPQ0 1083 aa8.97□□□□□ -0.97
TRIM6-201ENST00000278302 TATP17735 454 aaPredicted RBP8.96□□□□□ -0.97
TRIM6-201ENST00000278302 UBE2HP62256 183 aa8.96□□□□□ -0.97
TRIM6-201ENST00000278302 ARID5BQ14865 1188 aa8.96□□□□□ -0.97
TRIM6-201ENST00000278302 SYT10Q6XYQ8 523 aa8.96□□□□□ -0.97
TRIM6-201ENST00000278302 SYTL4Q96C24 671 aaPredicted RBP8.96□□□□□ -0.97
TRIM6-201ENST00000278302 IL17RAQ96F46 866 aa8.96□□□□□ -0.97
TRIM6-201ENST00000278302 TRIM5Q9C035 493 aa8.96□□□□□ -0.97
TRIM6-201ENST00000278302 TSPYL1Q9H0U9 437 aa8.96□□□□□ -0.97
TRIM6-201ENST00000278302 BICC1Q9H694 974 aaKnown RBP8.96□□□□□ -0.97
TRIM6-201ENST00000278302 TRMT1Q9NXH9 659 aaKnown RBP8.96□□□□□ -0.97
TRIM6-201ENST00000278302 FAM53CQ9NYF3 392 aa8.96□□□□□ -0.97
TRIM6-201ENST00000278302 LCMT1Q9UIC8 334 aa8.96□□□□□ -0.97
TRIM6-201ENST00000278302 USP42Q9H9J4 1324 aaKnown RBP8.96□□□□□ -0.98
TRIM6-201ENST00000278302 CPA1P15085 419 aa8.96□□□□□ -0.98
TRIM6-201ENST00000278302 PRPF40BQ6NWY9 871 aaKnown RBP8.96□□□□□ -0.98
TRIM6-201ENST00000278302 LARP1Q6PKG0 1096 aaKnown RBP8.96□□□□□ -0.98
TRIM6-201ENST00000278302 EVI5LQ96CN4 794 aa8.96□□□□□ -0.98
TRIM6-201ENST00000278302 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.96□□□□□ -0.98
TRIM6-201ENST00000278302 SMC3Q9UQE7 1217 aa8.96□□□□□ -0.98
TRIM6-201ENST00000278302 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.96□□□□□ -0.98
TRIM6-201ENST00000278302 PTH1RQ03431 593 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 ZNF790Q6PG37 636 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 JAKMIP1Q96N16 626 aaKnown RBP8.95□□□□□ -0.98
TRIM6-201ENST00000278302 TOMM22Q9NS69 142 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 ERCC6LQ2NKX8 1250 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 CCDC144BQ3MJ40 725 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 KRBA2Q6ZNG9 492 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 CCDC144CPQ8IYA2 1237 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 CKAP2LQ8IYA6 745 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 RASSF4Q9H2L5 321 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 PDRG1Q9NUG6 133 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 ZKSCAN1P17029 563 aaPredicted RBP8.95□□□□□ -0.98
TRIM6-201ENST00000278302 ST5P78524 1137 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 LRRN4CLQ8ND94 238 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 XAGE3Q8WTP9 111 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 MYD88Q99836 296 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 C19orf44Q9H6X5 657 aa8.95□□□□□ -0.98
TRIM6-201ENST00000278302 ERBB3P21860 1342 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 SASH1O94885 1247 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 PRR29P0C7W0 189 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 CCDC192P0DO97 292 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 ATF3P18847 181 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 DNM1Q05193 864 aaKnown RBP8.94□□□□□ -0.98
TRIM6-201ENST00000278302 COPS6Q7L5N1 327 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 TTC5Q8N0Z6 440 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 DDX54Q8TDD1 881 aaKnown RBP8.94□□□□□ -0.98
TRIM6-201ENST00000278302 TTC14Q96N46 770 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 BOLA2Q9H3K6 86 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 SLC52A2Q9HAB3 445 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 CYP46A1Q9Y6A2 500 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 RPAP1Q9BWH6 1393 aaPredicted RBP8.94□□□□□ -0.98
TRIM6-201ENST00000278302 HEG1Q9ULI3 1381 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 OVOS2A0A0G2JMS6 1433 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 HIP1O00291 1037 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 DHX16O60231 1041 aaKnown RBP8.94□□□□□ -0.98
TRIM6-201ENST00000278302 RUFY3Q7L099 469 aa8.94□□□□□ -0.98
TRIM6-201ENST00000278302 EAF2Q96CJ1 260 aaPredicted RBP8.94□□□□□ -0.98
TRIM6-201ENST00000278302 ZCCHC17Q9NP64 241 aaKnown RBP8.94□□□□□ -0.98
TRIM6-201ENST00000278302 NOP2P46087 812 aaKnown RBP8.93□□□□□ -0.98
TRIM6-201ENST00000278302 GTF2A1P52655 376 aaPredicted RBP8.93□□□□□ -0.98
TRIM6-201ENST00000278302 PDIA6Q15084 440 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 PTPN14Q15678 1187 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 CCDC83Q8IWF9 413 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms