RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SF3B2Q13435 895 aaKnown RBP9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 CCDC50Q8IVM0 306 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 VPS18Q9P253 973 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 KIF3CO14782 793 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 SNX21Q969T3 373 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 IGF1RP08069 1367 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 SYT1P21579 422 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 KIF5AQ12840 1032 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 TOM1L2Q6ZVM7 507 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 LMNTD2Q8IXW0 634 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 MTRF1LQ9UGC7 380 aaKnown RBP9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 LUC7L2Q9Y383 392 aaKnown RBP9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 TNNC1P63316 161 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 GIMAP6Q6P9H5 292 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 DRC1Q96MC2 740 aa9.92□□□□□ -0.82
SCUBE3-201ENST00000274938 CCT2P78371 535 aaKnown RBP9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 MAP7D1Q3KQU3 841 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 SELENOSQ9BQE4 189 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 SLC52A1Q9NWF4 448 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 PSMA7O14818 248 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 TRIM7Q9C029 511 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 NSD3Q9BZ95 1437 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 TMEM67Q5HYA8 995 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 SPTY2D1Q68D10 685 aaPredicted RBP9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 FMNL3Q8IVF7 1028 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 SYCP3Q8IZU3 236 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 PAIP2Q9BPZ3 127 aaKnown RBP9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 JAKMIP2Q96AA8 810 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 GIGYF1O75420 1035 aaPredicted RBP9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 ATP5DP30049 168 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 CEP128Q6ZU80 1094 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 TMX3Q96JJ7 454 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 MKRN1Q9UHC7 482 aaKnown RBP9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 CIB2O75838 187 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 ATP2A2P16615 1042 aaKnown RBP9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 TRAF1Q13077 416 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 CACNA2D3Q8IZS8 1091 aa9.91□□□□□ -0.82
SCUBE3-201ENST00000274938 IFIT5Q13325 482 aaKnown RBP9.9□□□□□ -0.82
SCUBE3-201ENST00000274938 ZWINTO95229 277 aa9.9□□□□□ -0.82
SCUBE3-201ENST00000274938 TAF7Q15545 349 aaPredicted RBP9.9□□□□□ -0.82
SCUBE3-201ENST00000274938 TXNDC2Q86VQ3 553 aa9.9□□□□□ -0.82
SCUBE3-201ENST00000274938 ERO1AQ96HE7 468 aa9.9□□□□□ -0.82
SCUBE3-201ENST00000274938 KRT13P13646 458 aa9.9□□□□□ -0.82
SCUBE3-201ENST00000274938 KCNH5Q8NCM2 988 aa9.9□□□□□ -0.82
SCUBE3-201ENST00000274938 MIPOL1Q8TD10 442 aa9.9□□□□□ -0.82
SCUBE3-201ENST00000274938 SERPINA10Q9UK55 444 aa9.9□□□□□ -0.82
SCUBE3-201ENST00000274938 LDHCP07864 332 aa9.9□□□□□ -0.83
SCUBE3-201ENST00000274938 GABPB1Q06547 395 aaPredicted RBP9.9□□□□□ -0.83
SCUBE3-201ENST00000274938 CFAP58Q5T655 872 aa9.9□□□□□ -0.83
SCUBE3-201ENST00000274938 STMN2Q93045 179 aa9.9□□□□□ -0.83
SCUBE3-201ENST00000274938 TSGA10Q9BZW7 698 aa9.9□□□□□ -0.83
SCUBE3-201ENST00000274938 TPD52P55327 224 aaPredicted RBP9.9□□□□□ -0.83
SCUBE3-201ENST00000274938 PDE4BQ07343 736 aa9.9□□□□□ -0.83
SCUBE3-201ENST00000274938 AMOTQ4VCS5 1084 aa9.9□□□□□ -0.83
SCUBE3-201ENST00000274938 TMTC2Q8N394 836 aa9.9□□□□□ -0.83
SCUBE3-201ENST00000274938 SWAP70Q9UH65 585 aa9.9□□□□□ -0.83
SCUBE3-201ENST00000274938 ARHGAP5Q13017 1502 aa9.9□□□□□ -0.83
SCUBE3-201ENST00000274938 PAXIP1Q6ZW49 1069 aaPredicted RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 KAT14Q9H8E8 782 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 NAA25Q14CX7 972 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 CROCCP2Q86T23 111 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 PROSER2Q86WR7 435 aaPredicted RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 AOPEPQ8N6M6 819 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 DDX54Q8TDD1 881 aaKnown RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 ZBTB9Q96C00 473 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 PUS7Q96PZ0 661 aaKnown RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 RNF216Q9NWF9 866 aaPredicted RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 FANCD2Q9BXW9 1451 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 ATP11AP98196 1134 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 DNAJC21Q5F1R6 531 aaKnown RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 RPUSD2Q8IZ73 545 aaKnown RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 CCDC8Q9H0W5 538 aaPredicted RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 FEZ2Q9UHY8 353 aaPredicted RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 BICDL2A1A5D9 508 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 DCAF8L1A6NGE4 600 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 HDAC1Q13547 482 aaPredicted RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 USP48Q86UV5 1035 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 MYD88Q99836 296 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 SPINK5Q9NQ38 1064 aaPredicted RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 F13A1P00488 732 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 INTS8Q75QN2 995 aaKnown RBP9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 GAPVD1Q14C86 1478 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 CCDC42Q96M95 316 aa9.89□□□□□ -0.83
SCUBE3-201ENST00000274938 IL16Q14005 1332 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 NDC80O14777 642 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 STAT6P42226 847 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 MFSD6Q6ZSS7 791 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 SLC26A6Q9BXS9 759 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 FAM184BQ9ULE4 1060 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 ERICH3Q5RHP9 1530 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 USH1CQ9Y6N9 552 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 C10orf67Q8IYJ2 551 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 ZNF830Q96NB3 372 aaPredicted RBP9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 KRT23Q9C075 422 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 VCX3BQ9H321 246 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 C20orf194Q5TEA3 1177 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 CCDC82Q8N4S0 544 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 AFAP1L1Q8TED9 768 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms