RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 KIF13BQ9NQT8 1826 aa21.51■■□□□ 1.03
SKP2-201ENST00000274254 CRY2Q49AN0 593 aa21.51■■□□□ 1.03
SKP2-201ENST00000274254 RPAP2Q8IXW5 612 aaPredicted RBP21.51■■□□□ 1.03
SKP2-201ENST00000274254 ATP8B2P98198 1209 aa21.5■■□□□ 1.03
SKP2-201ENST00000274254 SIRT2Q8IXJ6 389 aa21.5■■□□□ 1.03
SKP2-201ENST00000274254 RTL9Q8NET4 1388 aa21.5■■□□□ 1.03
SKP2-201ENST00000274254 CCDC152Q4G0S7 254 aa21.5■■□□□ 1.03
SKP2-201ENST00000274254 PNMA6EA0A0J9YXQ4 647 aa21.49■■□□□ 1.03
SKP2-201ENST00000274254 PDE6BP35913 854 aa21.49■■□□□ 1.03
SKP2-201ENST00000274254 FAM161AQ3B820 660 aa21.49■■□□□ 1.03
SKP2-201ENST00000274254 GREM2Q9H772 168 aa21.49■■□□□ 1.03
SKP2-201ENST00000274254 SRGAP3O43295 1099 aa21.47■■□□□ 1.03
SKP2-201ENST00000274254 POLA2Q14181 598 aa21.47■■□□□ 1.03
SKP2-201ENST00000274254 SSH3Q8TE77 659 aa21.47■■□□□ 1.03
SKP2-201ENST00000274254 CCDC85AQ96PX6 553 aaPredicted RBP21.47■■□□□ 1.03
SKP2-201ENST00000274254 PDZRN3Q9UPQ7 1066 aa21.46■■□□□ 1.03
SKP2-201ENST00000274254 CHMP3Q9Y3E7 222 aa21.46■■□□□ 1.03
SKP2-201ENST00000274254 COL11A2P13942 1736 aaPredicted RBP21.46■■□□□ 1.03
SKP2-201ENST00000274254 SRGNP10124 158 aa21.45■■□□□ 1.02
SKP2-201ENST00000274254 ITGA6P23229 1130 aa21.45■■□□□ 1.02
SKP2-201ENST00000274254 RFX5P48382 616 aaPredicted RBP21.45■■□□□ 1.02
SKP2-201ENST00000274254 HOXA10P31260 410 aaPredicted RBP21.45■■□□□ 1.02
SKP2-201ENST00000274254 IFIT5Q13325 482 aaKnown RBP21.45■■□□□ 1.02
SKP2-201ENST00000274254 CCDC57Q2TAC2 916 aa21.45■■□□□ 1.02
SKP2-201ENST00000274254 CD2APQ9Y5K6 639 aa21.45■■□□□ 1.02
SKP2-201ENST00000274254 HMMRO75330 724 aa21.44■■□□□ 1.02
SKP2-201ENST00000274254 HDAC1Q13547 482 aaPredicted RBP21.44■■□□□ 1.02
SKP2-201ENST00000274254 SEC31BQ9NQW1 1179 aa21.44■■□□□ 1.02
SKP2-201ENST00000274254 ANKRD18BA2A2Z9 1011 aa21.43■■□□□ 1.02
SKP2-201ENST00000274254 PTPN12Q05209 780 aaKnown RBP21.43■■□□□ 1.02
SKP2-201ENST00000274254 C2CD5Q86YS7 1000 aa21.43■■□□□ 1.02
SKP2-201ENST00000274254 RPGRQ92834 1020 aaKnown RBP21.43■■□□□ 1.02
SKP2-201ENST00000274254 KIAA1551Q9HCM1 1747 aa21.42■■□□□ 1.02
SKP2-201ENST00000274254 COL4A1P02462 1669 aa21.42■■□□□ 1.02
SKP2-201ENST00000274254 H0YIN7 160 aa21.42■■□□□ 1.02
SKP2-201ENST00000274254 NPR1P16066 1061 aa21.42■■□□□ 1.02
SKP2-201ENST00000274254 TGFB2P61812 414 aa21.42■■□□□ 1.02
SKP2-201ENST00000274254 DDX46Q7L014 1031 aaKnown RBP21.42■■□□□ 1.02
SKP2-201ENST00000274254 MASTLQ96GX5 879 aa21.42■■□□□ 1.02
SKP2-201ENST00000274254 COPRSQ9NQ92 184 aa21.42■■□□□ 1.02
SKP2-201ENST00000274254 TAF1P21675 1872 aa21.42■■□□□ 1.02
SKP2-201ENST00000274254 CHRNA5P30532 468 aa21.41■■□□□ 1.02
SKP2-201ENST00000274254 RBM17Q96I25 401 aaKnown RBP21.41■■□□□ 1.02
SKP2-201ENST00000274254 CRAMP1Q96RY5 1269 aa21.41■■□□□ 1.02
SKP2-201ENST00000274254 CDC5LQ99459 802 aaKnown RBP21.41■■□□□ 1.02
SKP2-201ENST00000274254 DLEC1Q9Y238 1755 aa21.41■■□□□ 1.02
SKP2-201ENST00000274254 LRP5O75197 1615 aa21.41■■□□□ 1.02
SKP2-201ENST00000274254 STYK1Q6J9G0 422 aa21.4■■□□□ 1.02
SKP2-201ENST00000274254 KLHDC4Q8TBB5 520 aa21.4■■□□□ 1.02
SKP2-201ENST00000274254 IGHDP01880 384 aa21.39■■□□□ 1.02
SKP2-201ENST00000274254 GRAPQ13588 217 aa21.39■■□□□ 1.02
SKP2-201ENST00000274254 GRAPLQ8TC17 118 aaPredicted RBP21.39■■□□□ 1.02
SKP2-201ENST00000274254 CELF1Q92879 486 aaKnown RBP21.39■■□□□ 1.02
SKP2-201ENST00000274254 ZNF594Q96JF6 807 aaPredicted RBP21.39■■□□□ 1.02
SKP2-201ENST00000274254 RWDD1Q9H446 243 aaPredicted RBP21.39■■□□□ 1.02
SKP2-201ENST00000274254 PPP4R2Q9NY27 417 aa21.39■■□□□ 1.02
SKP2-201ENST00000274254 PA2G4Q9UQ80 394 aaKnown RBP21.39■■□□□ 1.02
SKP2-201ENST00000274254 NOP58Q9Y2X3 529 aaKnown RBP21.39■■□□□ 1.02
SKP2-201ENST00000274254 DPEP1P16444 411 aa21.39■■□□□ 1.01
SKP2-201ENST00000274254 KCNA3P22001 575 aa21.39■■□□□ 1.01
SKP2-201ENST00000274254 RPS8P62241 208 aaKnown RBP21.38■■□□□ 1.01
SKP2-201ENST00000274254 TAF7LQ5H9L4 462 aa21.38■■□□□ 1.01
SKP2-201ENST00000274254 ANKRD18AQ8IVF6 992 aa21.38■■□□□ 1.01
SKP2-201ENST00000274254 PPP1R1BQ9UD71 204 aaPredicted RBP21.38■■□□□ 1.01
SKP2-201ENST00000274254 FBXO3Q9UK99 471 aa21.38■■□□□ 1.01
SKP2-201ENST00000274254 A0A0G2JLW4 131 aa21.37■■□□□ 1.01
SKP2-201ENST00000274254 ALDH1B1P30837 517 aa21.37■■□□□ 1.01
SKP2-201ENST00000274254 DCTPP1Q9H773 170 aa21.37■■□□□ 1.01
SKP2-201ENST00000274254 GTF3C3Q9Y5Q9 886 aa21.37■■□□□ 1.01
SKP2-201ENST00000274254 SRCAPQ6ZRS2 3230 aa21.37■■□□□ 1.01
SKP2-201ENST00000274254 SURF6O75683 361 aaKnown RBP21.36■■□□□ 1.01
SKP2-201ENST00000274254 CIAO1O76071 339 aa21.36■■□□□ 1.01
SKP2-201ENST00000274254 IGHMBP2P38935 993 aaKnown RBP21.36■■□□□ 1.01
SKP2-201ENST00000274254 KLHL34Q8N239 644 aa21.36■■□□□ 1.01
SKP2-201ENST00000274254 ZNF622Q969S3 477 aaKnown RBP eCLIP21.36■■□□□ 1.01
SKP2-201ENST00000274254 FHDC1Q9C0D6 1143 aaPredicted RBP21.36■■□□□ 1.01
SKP2-201ENST00000274254 BSDC1Q9NW68 430 aaPredicted RBP21.36■■□□□ 1.01
SKP2-201ENST00000274254 EYA2O00167 538 aa21.35■■□□□ 1.01
SKP2-201ENST00000274254 BBOX1O75936 387 aa21.35■■□□□ 1.01
SKP2-201ENST00000274254 LDHAL6AQ6ZMR3 332 aa21.35■■□□□ 1.01
SKP2-201ENST00000274254 CNKSR1Q969H4 720 aa21.35■■□□□ 1.01
SKP2-201ENST00000274254 CCDC136Q96JN2 1154 aa21.35■■□□□ 1.01
SKP2-201ENST00000274254 MPHOSPH8Q99549 860 aa21.35■■□□□ 1.01
SKP2-201ENST00000274254 PUS3Q9BZE2 481 aaKnown RBP21.35■■□□□ 1.01
SKP2-201ENST00000274254 SPEF2Q9C093 1822 aa21.35■■□□□ 1.01
SKP2-201ENST00000274254 BRCA1P38398 1863 aaKnown RBP21.35■■□□□ 1.01
SKP2-201ENST00000274254 LRRC24Q50LG9 513 aa21.34■■□□□ 1.01
SKP2-201ENST00000274254 ATG9AQ7Z3C6 839 aa21.34■■□□□ 1.01
SKP2-201ENST00000274254 SIL1Q9H173 461 aa21.34■■□□□ 1.01
SKP2-201ENST00000274254 EXOC6BQ9Y2D4 811 aa21.34■■□□□ 1.01
SKP2-201ENST00000274254 RIPOR2Q9Y4F9 1068 aa21.34■■□□□ 1.01
SKP2-201ENST00000274254 SMC5Q8IY18 1101 aa21.34■■□□□ 1.01
SKP2-201ENST00000274254 NLGN2Q8NFZ4 835 aa21.34■■□□□ 1.01
SKP2-201ENST00000274254 HSP90AB4PQ58FF6 505 aa21.33■■□□□ 1
SKP2-201ENST00000274254 B4GALNT3Q6L9W6 998 aa21.33■■□□□ 1
SKP2-201ENST00000274254 PRPF40BQ6NWY9 871 aaKnown RBP21.33■■□□□ 1
SKP2-201ENST00000274254 TMC4Q7Z404 712 aa21.33■■□□□ 1
SKP2-201ENST00000274254 GCC1Q96CN9 775 aa21.33■■□□□ 1
SKP2-201ENST00000274254 CNNM1Q9NRU3 951 aa21.33■■□□□ 1
SKP2-201ENST00000274254 KDM2BQ8NHM5 1336 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms