RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 EHBP1Q8NDI1 1231 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 GCC1Q96CN9 775 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 IFT74Q96LB3 600 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 LARP6Q9BRS8 491 aaKnown RBP17.9■□□□□ 0.46
UBR3-201ENST00000272793 IDH1O75874 414 aaKnown RBP17.9■□□□□ 0.46
UBR3-201ENST00000272793 PTGS1P23219 599 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 CNGA1P29973 690 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 PPP1R7Q15435 360 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 PHLDB2Q86SQ0 1253 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 CTAGE9A4FU28 777 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 HGSO14964 777 aaPredicted RBP17.9■□□□□ 0.46
UBR3-201ENST00000272793 CCDC117Q8IWD4 279 aaPredicted RBP17.9■□□□□ 0.46
UBR3-201ENST00000272793 ZNF830Q96NB3 372 aaPredicted RBP17.9■□□□□ 0.46
UBR3-201ENST00000272793 ARID5AQ03989 594 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 ADCY5O95622 1261 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 GSDMDP57764 484 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 PPP1R21Q6ZMI0 780 aa17.9■□□□□ 0.46
UBR3-201ENST00000272793 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.9■□□□□ 0.46
UBR3-201ENST00000272793 PDCD2Q16342 344 aaPredicted RBP17.9■□□□□ 0.46
UBR3-201ENST00000272793 EFCAB2Q5VUJ9 269 aa17.89■□□□□ 0.45
UBR3-201ENST00000272793 NOC2LQ9Y3T9 749 aaKnown RBP17.89■□□□□ 0.45
UBR3-201ENST00000272793 USH1CQ9Y6N9 552 aa17.89■□□□□ 0.45
UBR3-201ENST00000272793 ZNF365Q70YC5 407 aa17.89■□□□□ 0.45
UBR3-201ENST00000272793 IFT81Q8WYA0 676 aa17.89■□□□□ 0.45
UBR3-201ENST00000272793 GDPD2Q9HCC8 539 aa17.89■□□□□ 0.45
UBR3-201ENST00000272793 SLC4A2P04920 1241 aa17.89■□□□□ 0.45
UBR3-201ENST00000272793 UTP14CQ5TAP6 766 aaKnown RBP17.89■□□□□ 0.45
UBR3-201ENST00000272793 AIDAQ96BJ3 306 aa17.89■□□□□ 0.45
UBR3-201ENST00000272793 E7EVH7 732 aa17.89■□□□□ 0.45
UBR3-201ENST00000272793 CLSTN2Q9H4D0 955 aa17.89■□□□□ 0.45
UBR3-201ENST00000272793 OPHN1O60890 802 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 CHD1LQ86WJ1 897 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 TPX2Q9ULW0 747 aaKnown RBP17.88■□□□□ 0.45
UBR3-201ENST00000272793 CCDC62Q6P9F0 684 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 AFAP1L2Q8N4X5 818 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 STRN4Q9NRL3 753 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 PAXBP1Q9Y5B6 917 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 RFX1P22670 979 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 SMARCC2Q8TAQ2 1214 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 TLDC2A0PJX2 215 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 WHAMMP3Q1A5X7 153 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 IL1RAPL2Q9NP60 686 aa17.88■□□□□ 0.45
UBR3-201ENST00000272793 CUX2O14529 1486 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 PPP2R5DQ14738 602 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 TMTC4Q5T4D3 741 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 PDZD8Q8NEN9 1154 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 ZSCAN31Q96LW9 406 aaPredicted RBP17.87■□□□□ 0.45
UBR3-201ENST00000272793 CETN3O15182 167 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 TWISTNBQ3B726 338 aaPredicted RBP17.87■□□□□ 0.45
UBR3-201ENST00000272793 C8orf76Q96K31 380 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 AGTPBP1Q9UPW5 1226 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 MCUR1Q96AQ8 359 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 PHAXQ9H814 394 aaKnown RBP17.87■□□□□ 0.45
UBR3-201ENST00000272793 CCDC171Q6TFL3 1326 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 AAMPQ13685 434 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 TSNAXIP1Q2TAA8 658 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 RAB11FIP4Q86YS3 637 aa17.87■□□□□ 0.45
UBR3-201ENST00000272793 ITIH3Q06033 890 aa17.86■□□□□ 0.45
UBR3-201ENST00000272793 ZNF444Q8N0Y2 327 aaPredicted RBP17.86■□□□□ 0.45
UBR3-201ENST00000272793 FYB2Q5VWT5 728 aa17.86■□□□□ 0.45
UBR3-201ENST00000272793 CAPZA3Q96KX2 299 aa17.86■□□□□ 0.45
UBR3-201ENST00000272793 TCP11L1Q9NUJ3 509 aa17.86■□□□□ 0.45
UBR3-201ENST00000272793 MTHFSP49914 203 aa17.86■□□□□ 0.45
UBR3-201ENST00000272793 CCDC85AQ96PX6 553 aaPredicted RBP17.86■□□□□ 0.45
UBR3-201ENST00000272793 MRRFQ96E11 262 aaKnown RBP17.86■□□□□ 0.45
UBR3-201ENST00000272793 PHEXP78562 749 aa17.86■□□□□ 0.45
UBR3-201ENST00000272793 SSRP1Q08945 709 aaKnown RBP17.86■□□□□ 0.45
UBR3-201ENST00000272793 VCX3AQ9NNX9 186 aa17.86■□□□□ 0.45
UBR3-201ENST00000272793 KRT32Q14532 448 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 AMOTQ4VCS5 1084 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 ZC3H6P61129 1189 aaKnown RBP17.85■□□□□ 0.45
UBR3-201ENST00000272793 TRIM55Q9BYV6 548 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 EXOC1Q9NV70 894 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 KIFC2Q96AC6 838 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 GBP5Q96PP8 586 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 ANKIB1Q9P2G1 1089 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 IDEP14735 1019 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 CCDC122Q5T0U0 273 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 TRPC3Q13507 836 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 GIMAP4Q9NUV9 329 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 RBM27Q9P2N5 1060 aaKnown RBP17.85■□□□□ 0.45
UBR3-201ENST00000272793 KMT5BQ4FZB7 885 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 CCDC125Q86Z20 511 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 TCP11L2Q8N4U5 519 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 CLUL1Q15846 466 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 RNF10Q8N5U6 811 aaKnown RBP17.85■□□□□ 0.45
UBR3-201ENST00000272793 AKAP2Q9Y2D5 859 aa17.85■□□□□ 0.45
UBR3-201ENST00000272793 PFDN1O60925 122 aa17.84■□□□□ 0.45
UBR3-201ENST00000272793 TTF1Q15361 905 aaPredicted RBP17.84■□□□□ 0.45
UBR3-201ENST00000272793 RANBP6O60518 1105 aaKnown RBP17.84■□□□□ 0.45
UBR3-201ENST00000272793 CABP2Q9NPB3 220 aa17.84■□□□□ 0.45
UBR3-201ENST00000272793 U3KPZ7 1027 aaPredicted RBP17.84■□□□□ 0.45
UBR3-201ENST00000272793 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.84■□□□□ 0.45
UBR3-201ENST00000272793 KRBA2Q6ZNG9 492 aa17.84■□□□□ 0.45
UBR3-201ENST00000272793 RRBP1Q9P2E9 1410 aaKnown RBP17.84■□□□□ 0.45
UBR3-201ENST00000272793 CCDC196A0A1B0GTZ2 297 aa17.84■□□□□ 0.45
UBR3-201ENST00000272793 APOEP02649 317 aa17.84■□□□□ 0.45
UBR3-201ENST00000272793 HSP90AA4PQ58FG1 418 aa17.84■□□□□ 0.45
UBR3-201ENST00000272793 VAT1LQ9HCJ6 419 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms