RNA–Protein interactions for RNA: ENST00000269209.6

GAREM1-201, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAREM1, Length 3,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-201ENST00000269209 STX6O43752 255 aa12.15□□□□□ -0.46
GAREM1-201ENST00000269209 FKBP4Q02790 459 aaKnown RBP eCLIP12.15□□□□□ -0.46
GAREM1-201ENST00000269209 FAM173BQ6P4H8 233 aa12.15□□□□□ -0.46
GAREM1-201ENST00000269209 USP48Q86UV5 1035 aa12.15□□□□□ -0.46
GAREM1-201ENST00000269209 NAP1L2Q9ULW6 460 aaPredicted RBP12.15□□□□□ -0.46
GAREM1-201ENST00000269209 COL5A2P05997 1499 aaPredicted RBP12.15□□□□□ -0.46
GAREM1-201ENST00000269209 COL18A1P39060 1754 aa12.15□□□□□ -0.46
GAREM1-201ENST00000269209 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
GAREM1-201ENST00000269209 CASP7P55210 303 aa12.14□□□□□ -0.47
GAREM1-201ENST00000269209 RABL6Q3YEC7 729 aaPredicted RBP12.14□□□□□ -0.47
GAREM1-201ENST00000269209 HSP90AB3PQ58FF7 597 aa12.14□□□□□ -0.47
GAREM1-201ENST00000269209 RBSNQ9H1K0 784 aa12.14□□□□□ -0.47
GAREM1-201ENST00000269209 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.14□□□□□ -0.47
GAREM1-201ENST00000269209 GOLGB1Q14789 3259 aaKnown RBP12.14□□□□□ -0.47
GAREM1-201ENST00000269209 ADAMTS2O95450 1211 aa12.14□□□□□ -0.47
GAREM1-201ENST00000269209 FGD1P98174 961 aa12.14□□□□□ -0.47
GAREM1-201ENST00000269209 TAF7LQ5H9L4 462 aa12.14□□□□□ -0.47
GAREM1-201ENST00000269209 BLOC1S2Q6QNY1 142 aa12.14□□□□□ -0.47
GAREM1-201ENST00000269209 ZSWIM6Q9HCJ5 1215 aa12.14□□□□□ -0.47
GAREM1-201ENST00000269209 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
GAREM1-201ENST00000269209 HIP1O00291 1037 aa12.13□□□□□ -0.47
GAREM1-201ENST00000269209 FOSBP53539 338 aa12.13□□□□□ -0.47
GAREM1-201ENST00000269209 FAM43AQ8N2R8 423 aa12.13□□□□□ -0.47
GAREM1-201ENST00000269209 ANP32BQ92688 251 aaKnown RBP12.13□□□□□ -0.47
GAREM1-201ENST00000269209 RPAP1Q9BWH6 1393 aaPredicted RBP12.13□□□□□ -0.47
GAREM1-201ENST00000269209 H7C1W4 665 aa12.13□□□□□ -0.47
GAREM1-201ENST00000269209 ATP5JP18859 108 aa12.13□□□□□ -0.47
GAREM1-201ENST00000269209 GORABQ5T7V8 394 aa12.13□□□□□ -0.47
GAREM1-201ENST00000269209 VPS53Q5VIR6 699 aa12.13□□□□□ -0.47
GAREM1-201ENST00000269209 ATG9AQ7Z3C6 839 aa12.13□□□□□ -0.47
GAREM1-201ENST00000269209 TAF5LO75529 589 aa12.13□□□□□ -0.47
GAREM1-201ENST00000269209 CCDC57Q2TAC2 916 aa12.13□□□□□ -0.47
GAREM1-201ENST00000269209 RNF20Q5VTR2 975 aa12.13□□□□□ -0.47
GAREM1-201ENST00000269209 A0A0G2JLW4 131 aa12.12□□□□□ -0.47
GAREM1-201ENST00000269209 A0A1B0GUL7 405 aa12.12□□□□□ -0.47
GAREM1-201ENST00000269209 CHST3Q7LGC8 479 aa12.12□□□□□ -0.47
GAREM1-201ENST00000269209 COL15A1P39059 1388 aa12.12□□□□□ -0.47
GAREM1-201ENST00000269209 ZSCAN22P10073 491 aaPredicted RBP12.12□□□□□ -0.47
GAREM1-201ENST00000269209 PRKCSHP14314 528 aaPredicted RBP12.12□□□□□ -0.47
GAREM1-201ENST00000269209 HSP90B1P14625 803 aaKnown RBP12.12□□□□□ -0.47
GAREM1-201ENST00000269209 DNM1Q05193 864 aaKnown RBP12.12□□□□□ -0.47
GAREM1-201ENST00000269209 ST3GAL1Q11201 340 aa12.12□□□□□ -0.47
GAREM1-201ENST00000269209 HLFQ16534 295 aa12.12□□□□□ -0.47
GAREM1-201ENST00000269209 PI16Q6UXB8 463 aa12.12□□□□□ -0.47
GAREM1-201ENST00000269209 TBC1D2BQ9UPU7 963 aa12.12□□□□□ -0.47
GAREM1-201ENST00000269209 MPNDQ8N594 471 aa12.11□□□□□ -0.47
GAREM1-201ENST00000269209 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
GAREM1-201ENST00000269209 CCDC191Q8NCU4 936 aa12.11□□□□□ -0.47
GAREM1-201ENST00000269209 EPB41L2O43491 1005 aaKnown RBP12.11□□□□□ -0.47
GAREM1-201ENST00000269209 IFIT1P09914 478 aaKnown RBP12.11□□□□□ -0.47
GAREM1-201ENST00000269209 PSMA5P28066 241 aa12.11□□□□□ -0.47
GAREM1-201ENST00000269209 ADORA1P30542 326 aa12.11□□□□□ -0.47
GAREM1-201ENST00000269209 LARP1BQ659C4 914 aaKnown RBP12.11□□□□□ -0.47
GAREM1-201ENST00000269209 KIF6Q6ZMV9 814 aa12.11□□□□□ -0.47
GAREM1-201ENST00000269209 DDX11Q96FC9 970 aa12.11□□□□□ -0.47
GAREM1-201ENST00000269209 ACSBG1Q96GR2 724 aa12.11□□□□□ -0.47
GAREM1-201ENST00000269209 ATG3Q9NT62 314 aa12.11□□□□□ -0.47
GAREM1-201ENST00000269209 PAG1Q9NWQ8 432 aa12.11□□□□□ -0.47
GAREM1-201ENST00000269209 EYA2O00167 538 aa12.1□□□□□ -0.47
GAREM1-201ENST00000269209 CYP21A2P08686 494 aa12.1□□□□□ -0.47
GAREM1-201ENST00000269209 CEP126Q9P2H0 1117 aa12.1□□□□□ -0.47
GAREM1-201ENST00000269209 F13A1P00488 732 aa12.1□□□□□ -0.47
GAREM1-201ENST00000269209 HAUS7Q99871 368 aa12.1□□□□□ -0.47
GAREM1-201ENST00000269209 ISY1Q9ULR0 285 aaKnown RBP12.1□□□□□ -0.47
GAREM1-201ENST00000269209 TCHHQ07283 1943 aa12.1□□□□□ -0.47
GAREM1-201ENST00000269209 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
GAREM1-201ENST00000269209 ZNF609O15014 1411 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 ZNF445P59923 1031 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 TCIRG1Q13488 830 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 WASHC4Q2M389 1173 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 ZBTB1Q9Y2K1 713 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 NUTM2BA6NNL0 878 aaPredicted RBP12.09□□□□□ -0.47
GAREM1-201ENST00000269209 NUTM2EB1AL46 878 aaPredicted RBP12.09□□□□□ -0.47
GAREM1-201ENST00000269209 JAK2O60674 1132 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 STARD3NLO95772 234 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 IL15P40933 162 aaPredicted RBP12.09□□□□□ -0.47
GAREM1-201ENST00000269209 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
GAREM1-201ENST00000269209 CDC37L1Q7L3B6 337 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 NUTM2AQ8IVF1 878 aaPredicted RBP12.09□□□□□ -0.47
GAREM1-201ENST00000269209 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 MRC1P22897 1456 aa12.09□□□□□ -0.47
GAREM1-201ENST00000269209 AFDNP55196 1824 aaKnown RBP12.08□□□□□ -0.47
GAREM1-201ENST00000269209 MED23Q9ULK4 1368 aa12.08□□□□□ -0.47
GAREM1-201ENST00000269209 MBD3O95983 291 aa12.08□□□□□ -0.47
GAREM1-201ENST00000269209 HAND2P61296 217 aa12.08□□□□□ -0.47
GAREM1-201ENST00000269209 TOB2Q14106 344 aaPredicted RBP12.08□□□□□ -0.47
GAREM1-201ENST00000269209 TTLL5Q6EMB2 1281 aa12.08□□□□□ -0.47
GAREM1-201ENST00000269209 KBTBD3Q8NAB2 608 aa12.08□□□□□ -0.47
GAREM1-201ENST00000269209 BRF1Q92994 677 aa12.08□□□□□ -0.47
GAREM1-201ENST00000269209 NEK1Q96PY6 1258 aa12.08□□□□□ -0.47
GAREM1-201ENST00000269209 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.48
GAREM1-201ENST00000269209 PLCB2Q00722 1185 aa12.08□□□□□ -0.48
GAREM1-201ENST00000269209 Q6ZUG5 572 aa12.08□□□□□ -0.48
GAREM1-201ENST00000269209 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
GAREM1-201ENST00000269209 TM6SF1Q9BZW5 370 aa12.08□□□□□ -0.48
GAREM1-201ENST00000269209 TFIP11Q9UBB9 837 aaKnown RBP12.08□□□□□ -0.48
GAREM1-201ENST00000269209 MTMR6Q9Y217 621 aa12.08□□□□□ -0.48
GAREM1-201ENST00000269209 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms