RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 FPGT-TNNI3KV9GXZ4 949 aa12.32□□□□□ -0.44
LSG1-201ENST00000265245 ANKRD1Q15327 319 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 CSPP1Q1MSJ5 1256 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 BLOC1S2Q6QNY1 142 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 HMG20BQ9P0W2 317 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 DBNLQ9UJU6 430 aaKnown RBP12.31□□□□□ -0.44
LSG1-201ENST00000265245 C5P01031 1676 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 RFX5P48382 616 aaPredicted RBP12.31□□□□□ -0.44
LSG1-201ENST00000265245 TFCP2Q12800 502 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 ZSCAN30Q86W11 494 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 TSPY26PQ9H489 355 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 PCDH11XQ9BZA7 1347 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 PCDH11YQ9BZA8 1340 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 MED23Q9ULK4 1368 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 GADD45BO75293 160 aaPredicted RBP12.31□□□□□ -0.44
LSG1-201ENST00000265245 TOM1L2Q6ZVM7 507 aa12.31□□□□□ -0.44
LSG1-201ENST00000265245 DDX54Q8TDD1 881 aaKnown RBP12.31□□□□□ -0.44
LSG1-201ENST00000265245 HS1BP3Q53T59 392 aa12.3□□□□□ -0.44
LSG1-201ENST00000265245 CNPY2Q9Y2B0 182 aa12.3□□□□□ -0.44
LSG1-201ENST00000265245 MSNP26038 577 aaKnown RBP12.3□□□□□ -0.44
LSG1-201ENST00000265245 ZCRB1Q8TBF4 217 aaKnown RBP12.3□□□□□ -0.44
LSG1-201ENST00000265245 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
LSG1-201ENST00000265245 COL18A1P39060 1754 aa12.3□□□□□ -0.44
LSG1-201ENST00000265245 UBE2HP62256 183 aa12.3□□□□□ -0.44
LSG1-201ENST00000265245 ME3Q16798 604 aa12.3□□□□□ -0.44
LSG1-201ENST00000265245 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
LSG1-201ENST00000265245 RNF214Q8ND24 703 aa12.29□□□□□ -0.44
LSG1-201ENST00000265245 PDLIM2Q96JY6 352 aa12.29□□□□□ -0.44
LSG1-201ENST00000265245 WDR17Q8IZU2 1322 aa12.29□□□□□ -0.44
LSG1-201ENST00000265245 COL16A1Q07092 1604 aaPredicted RBP12.29□□□□□ -0.44
LSG1-201ENST00000265245 VPS37CA5D8V6 355 aaPredicted RBP12.29□□□□□ -0.44
LSG1-201ENST00000265245 FIBPO43427 364 aa12.29□□□□□ -0.44
LSG1-201ENST00000265245 KRT32Q14532 448 aa12.29□□□□□ -0.44
LSG1-201ENST00000265245 EDC3Q96F86 508 aaKnown RBP12.29□□□□□ -0.44
LSG1-201ENST00000265245 DNAJC2Q99543 621 aaKnown RBP12.29□□□□□ -0.44
LSG1-201ENST00000265245 PDCP20941 246 aa12.29□□□□□ -0.44
LSG1-201ENST00000265245 ZNF589Q86UQ0 364 aaPredicted RBP12.29□□□□□ -0.44
LSG1-201ENST00000265245 NECAB1Q8N987 351 aa12.29□□□□□ -0.44
LSG1-201ENST00000265245 CWC25Q9NXE8 425 aaPredicted RBP12.29□□□□□ -0.44
LSG1-201ENST00000265245 TPCN1Q9ULQ1 816 aa12.29□□□□□ -0.44
LSG1-201ENST00000265245 MTMR6Q9Y217 621 aa12.29□□□□□ -0.44
LSG1-201ENST00000265245 ERVV-2B6SEH9 535 aa12.28□□□□□ -0.44
LSG1-201ENST00000265245 TAF5LO75529 589 aa12.28□□□□□ -0.44
LSG1-201ENST00000265245 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
LSG1-201ENST00000265245 CCDC183Q5T5S1 534 aa12.28□□□□□ -0.44
LSG1-201ENST00000265245 DBNDD2Q9BQY9 259 aa12.28□□□□□ -0.44
LSG1-201ENST00000265245 RFX7Q2KHR2 1363 aa12.28□□□□□ -0.44
LSG1-201ENST00000265245 CASP7P55210 303 aa12.28□□□□□ -0.44
LSG1-201ENST00000265245 BRINP3Q76B58 766 aa12.28□□□□□ -0.44
LSG1-201ENST00000265245 NBPF26B4DH59 902 aa12.28□□□□□ -0.44
LSG1-201ENST00000265245 LETM1O95202 739 aaPredicted RBP12.28□□□□□ -0.44
LSG1-201ENST00000265245 NBPF14Q5TI25 921 aa12.28□□□□□ -0.44
LSG1-201ENST00000265245 NBPF10Q6P3W6 841 aaKnown RBP12.28□□□□□ -0.44
LSG1-201ENST00000265245 NBPF15Q8N660 670 aa12.28□□□□□ -0.44
LSG1-201ENST00000265245 TSGA10IPQ3SY00 556 aa12.27□□□□□ -0.44
LSG1-201ENST00000265245 LARP1BQ659C4 914 aaKnown RBP12.27□□□□□ -0.44
LSG1-201ENST00000265245 FAM184AQ8NB25 1140 aa12.27□□□□□ -0.44
LSG1-201ENST00000265245 HAUS7Q99871 368 aa12.27□□□□□ -0.44
LSG1-201ENST00000265245 H7C1W4 665 aa12.27□□□□□ -0.45
LSG1-201ENST00000265245 PKD1L3Q7Z443 1732 aa12.27□□□□□ -0.45
LSG1-201ENST00000265245 JCADQ9P266 1359 aa12.27□□□□□ -0.45
LSG1-201ENST00000265245 ALDH8A1Q9H2A2 487 aaPredicted RBP12.27□□□□□ -0.45
LSG1-201ENST00000265245 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.45
LSG1-201ENST00000265245 ST3GAL1Q11201 340 aa12.26□□□□□ -0.45
LSG1-201ENST00000265245 TPRNQ4KMQ1 711 aa12.26□□□□□ -0.45
LSG1-201ENST00000265245 USPL1Q5W0Q7 1092 aa12.26□□□□□ -0.45
LSG1-201ENST00000265245 TTLL7Q6ZT98 887 aa12.26□□□□□ -0.45
LSG1-201ENST00000265245 TCEANC2Q96MN5 208 aa12.26□□□□□ -0.45
LSG1-201ENST00000265245 DNM1Q05193 864 aaKnown RBP12.26□□□□□ -0.45
LSG1-201ENST00000265245 MCMDC2Q4G0Z9 681 aa12.26□□□□□ -0.45
LSG1-201ENST00000265245 NEUROD6Q96NK8 337 aa12.26□□□□□ -0.45
LSG1-201ENST00000265245 IL2RBP14784 551 aa12.25□□□□□ -0.45
LSG1-201ENST00000265245 IL15P40933 162 aaPredicted RBP12.25□□□□□ -0.45
LSG1-201ENST00000265245 FOXO4P98177 505 aa12.25□□□□□ -0.45
LSG1-201ENST00000265245 DDX46Q7L014 1031 aaKnown RBP12.25□□□□□ -0.45
LSG1-201ENST00000265245 CCDC191Q8NCU4 936 aa12.25□□□□□ -0.45
LSG1-201ENST00000265245 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
LSG1-201ENST00000265245 A1BGP04217 495 aa12.25□□□□□ -0.45
LSG1-201ENST00000265245 KBTBD3Q8NAB2 608 aa12.25□□□□□ -0.45
LSG1-201ENST00000265245 ZBTB3Q9H5J0 574 aa12.25□□□□□ -0.45
LSG1-201ENST00000265245 TAF7LQ5H9L4 462 aa12.25□□□□□ -0.45
LSG1-201ENST00000265245 NEK1Q96PY6 1258 aa12.25□□□□□ -0.45
LSG1-201ENST00000265245 TAF6LQ9Y6J9 622 aa12.25□□□□□ -0.45
LSG1-201ENST00000265245 KRT85P78386 507 aa12.24□□□□□ -0.45
LSG1-201ENST00000265245 NKX1-1Q15270 411 aaPredicted RBP12.24□□□□□ -0.45
LSG1-201ENST00000265245 GPR108Q9NPR9 543 aa12.24□□□□□ -0.45
LSG1-201ENST00000265245 NOL7Q9UMY1 257 aaKnown RBP12.24□□□□□ -0.45
LSG1-201ENST00000265245 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
LSG1-201ENST00000265245 DTNBO60941 627 aa12.24□□□□□ -0.45
LSG1-201ENST00000265245 TOB2Q14106 344 aaPredicted RBP12.24□□□□□ -0.45
LSG1-201ENST00000265245 CCDC39Q9UFE4 941 aa12.24□□□□□ -0.45
LSG1-201ENST00000265245 CARD10Q9BWT7 1032 aa12.24□□□□□ -0.45
LSG1-201ENST00000265245 ZNF609O15014 1411 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 GOLIM4O00461 696 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 COL9A3Q14050 684 aaPredicted RBP12.23□□□□□ -0.45
LSG1-201ENST00000265245 CCDC129Q6ZRS4 1044 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 ATG9AQ7Z3C6 839 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 TICAM2Q86XR7 235 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 PHLPP1O60346 1717 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 PARP4Q9UKK3 1724 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms