RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TSPY26PQ9H489 355 aa26.95■■□□□ 1.9
MCF2L-201ENST00000261963 DBNLQ9UJU6 430 aaKnown RBP26.95■■□□□ 1.9
MCF2L-201ENST00000261963 ARFGEF2Q9Y6D5 1785 aa26.95■■□□□ 1.9
MCF2L-201ENST00000261963 COL9A3Q14050 684 aaPredicted RBP26.95■■□□□ 1.9
MCF2L-201ENST00000261963 USP48Q86UV5 1035 aa26.95■■□□□ 1.9
MCF2L-201ENST00000261963 PLBD2Q8NHP8 589 aa26.95■■□□□ 1.9
MCF2L-201ENST00000261963 SMC3Q9UQE7 1217 aa26.95■■□□□ 1.9
MCF2L-201ENST00000261963 A0A087WZG4 1122 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 ZKSCAN1P17029 563 aaPredicted RBP26.94■■□□□ 1.9
MCF2L-201ENST00000261963 HMGN5P82970 282 aaKnown RBP26.94■■□□□ 1.9
MCF2L-201ENST00000261963 ST3GAL1Q11201 340 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 TFCP2Q12800 502 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 PARP4Q9UKK3 1724 aaKnown RBP26.94■■□□□ 1.9
MCF2L-201ENST00000261963 NBPF26B4DH59 902 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 SLC27A2O14975 620 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 STX6O43752 255 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 TNNI3KQ59H18 835 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 NBPF14Q5TI25 921 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 NBPF10Q6P3W6 841 aaKnown RBP26.94■■□□□ 1.9
MCF2L-201ENST00000261963 BRINP3Q76B58 766 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 CCDC83Q8IWF9 413 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 NBPF15Q8N660 670 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 EDC3Q96F86 508 aaKnown RBP26.94■■□□□ 1.9
MCF2L-201ENST00000261963 FPGT-TNNI3KV9GXZ4 949 aa26.94■■□□□ 1.9
MCF2L-201ENST00000261963 A0A0U1RQG5 324 aaPredicted RBP26.92■■□□□ 1.9
MCF2L-201ENST00000261963 TMEM87AQ8NBN3 555 aa26.92■■□□□ 1.9
MCF2L-201ENST00000261963 KCNJ4P48050 445 aa26.92■■□□□ 1.9
MCF2L-201ENST00000261963 ZNF589Q86UQ0 364 aaPredicted RBP26.92■■□□□ 1.9
MCF2L-201ENST00000261963 ZSCAN31Q96LW9 406 aaPredicted RBP26.92■■□□□ 1.9
MCF2L-201ENST00000261963 SH2B1Q9NRF2 756 aaPredicted RBP26.92■■□□□ 1.9
MCF2L-201ENST00000261963 AFDNP55196 1824 aaKnown RBP26.92■■□□□ 1.9
MCF2L-201ENST00000261963 JCADQ9P266 1359 aa26.92■■□□□ 1.9
MCF2L-201ENST00000261963 ATP5JP18859 108 aa26.91■■□□□ 1.9
MCF2L-201ENST00000261963 LAMB4A4D0S4 1761 aa26.91■■□□□ 1.9
MCF2L-201ENST00000261963 WDR17Q8IZU2 1322 aa26.91■■□□□ 1.9
MCF2L-201ENST00000261963 HSPA2P54652 639 aa26.91■■□□□ 1.9
MCF2L-201ENST00000261963 ME3Q16798 604 aa26.9■■□□□ 1.9
MCF2L-201ENST00000261963 TAF6LQ9Y6J9 622 aa26.9■■□□□ 1.9
MCF2L-201ENST00000261963 DTNBO60941 627 aa26.9■■□□□ 1.9
MCF2L-201ENST00000261963 GTF2F1P35269 517 aaKnown RBP eCLIP26.9■■□□□ 1.9
MCF2L-201ENST00000261963 SYAP1Q96A49 352 aaPredicted RBP26.9■■□□□ 1.9
MCF2L-201ENST00000261963 GJB2P29033 226 aa26.89■■□□□ 1.9
MCF2L-201ENST00000261963 CNPY2Q9Y2B0 182 aa26.89■■□□□ 1.9
MCF2L-201ENST00000261963 F13A1P00488 732 aa26.89■■□□□ 1.89
MCF2L-201ENST00000261963 ZNF710Q8N1W2 664 aa26.89■■□□□ 1.89
MCF2L-201ENST00000261963 ZCRB1Q8TBF4 217 aaKnown RBP26.89■■□□□ 1.89
MCF2L-201ENST00000261963 PIBF1Q8WXW3 757 aa26.89■■□□□ 1.89
MCF2L-201ENST00000261963 PCDH11XQ9BZA7 1347 aa26.89■■□□□ 1.89
MCF2L-201ENST00000261963 PCDH11YQ9BZA8 1340 aa26.89■■□□□ 1.89
MCF2L-201ENST00000261963 GTPBP4Q9BZE4 634 aaKnown RBP26.88■■□□□ 1.89
MCF2L-201ENST00000261963 PRDM11Q9NQV5 511 aa26.88■■□□□ 1.89
MCF2L-201ENST00000261963 TPCN1Q9ULQ1 816 aa26.88■■□□□ 1.89
MCF2L-201ENST00000261963 TCHHQ07283 1943 aa26.88■■□□□ 1.89
MCF2L-201ENST00000261963 LMBR1LQ6UX01 489 aa26.87■■□□□ 1.89
MCF2L-201ENST00000261963 TTLL7Q6ZT98 887 aa26.87■■□□□ 1.89
MCF2L-201ENST00000261963 DBNDD2Q9BQY9 259 aa26.87■■□□□ 1.89
MCF2L-201ENST00000261963 H7C1W4 665 aa26.87■■□□□ 1.89
MCF2L-201ENST00000261963 TAF5LO75529 589 aa26.87■■□□□ 1.89
MCF2L-201ENST00000261963 FOXO4P98177 505 aa26.87■■□□□ 1.89
MCF2L-201ENST00000261963 NOLC1Q14978 699 aaKnown RBP eCLIP26.87■■□□□ 1.89
MCF2L-201ENST00000261963 TOM1L2Q6ZVM7 507 aa26.87■■□□□ 1.89
MCF2L-201ENST00000261963 MTMR6Q9Y217 621 aa26.87■■□□□ 1.89
MCF2L-201ENST00000261963 NDUFB9Q9Y6M9 179 aa26.87■■□□□ 1.89
MCF2L-201ENST00000261963 XIRP1Q702N8 1843 aaKnown RBP26.86■■□□□ 1.89
MCF2L-201ENST00000261963 PSMA5P28066 241 aa26.86■■□□□ 1.89
MCF2L-201ENST00000261963 NECAB1Q8N987 351 aa26.86■■□□□ 1.89
MCF2L-201ENST00000261963 CBX1P83916 185 aa26.85■■□□□ 1.89
MCF2L-201ENST00000261963 ERVV-2B6SEH9 535 aa26.85■■□□□ 1.89
MCF2L-201ENST00000261963 RNF20Q5VTR2 975 aa26.85■■□□□ 1.89
MCF2L-201ENST00000261963 TSC1Q92574 1164 aa26.85■■□□□ 1.89
MCF2L-201ENST00000261963 COL5A2P05997 1499 aaPredicted RBP26.84■■□□□ 1.89
MCF2L-201ENST00000261963 KCPQ6ZWJ8 1503 aa26.84■■□□□ 1.89
MCF2L-201ENST00000261963 PHF14O94880 888 aa26.84■■□□□ 1.89
MCF2L-201ENST00000261963 CHGBP05060 677 aa26.84■■□□□ 1.89
MCF2L-201ENST00000261963 TSGA10IPQ3SY00 556 aa26.84■■□□□ 1.89
MCF2L-201ENST00000261963 A1BGP04217 495 aa26.83■■□□□ 1.89
MCF2L-201ENST00000261963 RPS6KB1P23443 525 aa26.83■■□□□ 1.89
MCF2L-201ENST00000261963 NKX1-1Q15270 411 aaPredicted RBP26.83■■□□□ 1.89
MCF2L-201ENST00000261963 USPL1Q5W0Q7 1092 aa26.83■■□□□ 1.89
MCF2L-201ENST00000261963 UBR2Q8IWV8 1755 aa26.83■■□□□ 1.88
MCF2L-201ENST00000261963 UVSSAQ2YD98 709 aa26.82■■□□□ 1.88
MCF2L-201ENST00000261963 BLOC1S2Q6QNY1 142 aa26.82■■□□□ 1.88
MCF2L-201ENST00000261963 TCEANC2Q96MN5 208 aa26.82■■□□□ 1.88
MCF2L-201ENST00000261963 HAUS7Q99871 368 aa26.82■■□□□ 1.88
MCF2L-201ENST00000261963 KIF3AQ9Y496 699 aa26.82■■□□□ 1.88
MCF2L-201ENST00000261963 RFX7Q2KHR2 1363 aa26.82■■□□□ 1.88
MCF2L-201ENST00000261963 PPP4R3BQ5MIZ7 849 aa26.82■■□□□ 1.88
MCF2L-201ENST00000261963 FAM184AQ8NB25 1140 aa26.82■■□□□ 1.88
MCF2L-201ENST00000261963 ALDH8A1Q9H2A2 487 aaPredicted RBP26.82■■□□□ 1.88
MCF2L-201ENST00000261963 HMG20BQ9P0W2 317 aa26.82■■□□□ 1.88
MCF2L-201ENST00000261963 ZNF609O15014 1411 aa26.81■■□□□ 1.88
MCF2L-201ENST00000261963 SOS2Q07890 1332 aaPredicted RBP26.81■■□□□ 1.88
MCF2L-201ENST00000261963 ATG9AQ7Z3C6 839 aa26.81■■□□□ 1.88
MCF2L-201ENST00000261963 CWC25Q9NXE8 425 aaPredicted RBP26.81■■□□□ 1.88
MCF2L-201ENST00000261963 KIF20AO95235 890 aa26.81■■□□□ 1.88
MCF2L-201ENST00000261963 DNAJC2Q99543 621 aaKnown RBP26.81■■□□□ 1.88
MCF2L-201ENST00000261963 ATP6V1DQ9Y5K8 247 aa26.81■■□□□ 1.88
MCF2L-201ENST00000261963 TOB2Q14106 344 aaPredicted RBP26.8■■□□□ 1.88
MCF2L-201ENST00000261963 ZNF830Q96NB3 372 aaPredicted RBP26.8■■□□□ 1.88
MCF2L-201ENST00000261963 NUP188Q5SRE5 1749 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms