RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 PCDHB15Q9Y5E8 787 aa11.21□□□□□ -0.61
CIT-201ENST00000261833 SPATA24Q86W54 205 aa11.21□□□□□ -0.62
CIT-201ENST00000261833 HYPKQ9NX55 129 aa11.21□□□□□ -0.62
CIT-201ENST00000261833 DESP17661 470 aa11.21□□□□□ -0.62
CIT-201ENST00000261833 FERMT3Q86UX7 667 aa11.21□□□□□ -0.62
CIT-201ENST00000261833 TTC12Q9H892 705 aaPredicted RBP11.21□□□□□ -0.62
CIT-201ENST00000261833 SWAP70Q9UH65 585 aa11.21□□□□□ -0.62
CIT-201ENST00000261833 URB2Q14146 1524 aaKnown RBP11.2□□□□□ -0.62
CIT-201ENST00000261833 UNC13BO14795 1591 aa11.2□□□□□ -0.62
CIT-201ENST00000261833 IBTKQ9P2D0 1353 aaPredicted RBP11.2□□□□□ -0.62
CIT-201ENST00000261833 ZNF500O60304 480 aaPredicted RBP11.2□□□□□ -0.62
CIT-201ENST00000261833 ESYT1Q9BSJ8 1104 aa11.2□□□□□ -0.62
CIT-201ENST00000261833 NUP133Q8WUM0 1156 aa11.2□□□□□ -0.62
CIT-201ENST00000261833 SYKP43405 635 aa11.2□□□□□ -0.62
CIT-201ENST00000261833 DHX37Q8IY37 1157 aaKnown RBP11.2□□□□□ -0.62
CIT-201ENST00000261833 RAB34Q9BZG1 259 aa11.2□□□□□ -0.62
CIT-201ENST00000261833 ZNF287Q9HBT7 754 aa11.2□□□□□ -0.62
CIT-201ENST00000261833 IL1RAPL2Q9NP60 686 aa11.2□□□□□ -0.62
CIT-201ENST00000261833 PTPRKQ15262 1439 aa11.2□□□□□ -0.62
CIT-201ENST00000261833 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
CIT-201ENST00000261833 DMTNQ08495 405 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 VPS18Q9P253 973 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 NLRP6P59044 892 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 IPO4Q8TEX9 1081 aaKnown RBP11.19□□□□□ -0.62
CIT-201ENST00000261833 TRERF1Q96PN7 1200 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 GRM1Q13255 1194 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 CCDC97Q96F63 343 aaPredicted RBP11.19□□□□□ -0.62
CIT-201ENST00000261833 MKRN1Q9UHC7 482 aaKnown RBP11.19□□□□□ -0.62
CIT-201ENST00000261833 SLC12A7Q9Y666 1083 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 NPC1L1Q9UHC9 1359 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 RSPH14Q9UHP6 348 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 FANCAO15360 1455 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 CTAGE15A4D2H0 777 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 CTAGE8P0CG41 777 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 CTAGE6Q86UF2 777 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 CTAGE4Q8IX94 777 aa11.19□□□□□ -0.62
CIT-201ENST00000261833 ANKRD62A6NC57 917 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 CETN2P41208 172 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 AMPD3Q01432 767 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 TTLL12Q14166 644 aaPredicted RBP11.18□□□□□ -0.62
CIT-201ENST00000261833 CCDC102BQ68D86 513 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 POTEDQ86YR6 584 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.18□□□□□ -0.62
CIT-201ENST00000261833 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 MYL6BP14649 208 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 CCDC113Q9H0I3 377 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 SEPT11Q9NVA2 429 aaKnown RBP11.18□□□□□ -0.62
CIT-201ENST00000261833 TRIM21P19474 475 aaKnown RBP11.18□□□□□ -0.62
CIT-201ENST00000261833 HLTFQ14527 1009 aaKnown RBP eCLIP11.18□□□□□ -0.62
CIT-201ENST00000261833 OTUD6BQ8N6M0 293 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 AIDAQ96BJ3 306 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 SELENOOQ9BVL4 669 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 RRS1Q15050 365 aaKnown RBP11.18□□□□□ -0.62
CIT-201ENST00000261833 SOGA3Q5TF21 947 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 RSRC1Q96IZ7 334 aaKnown RBP11.18□□□□□ -0.62
CIT-201ENST00000261833 NOS1P29475 1434 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 TAF7Q15545 349 aaPredicted RBP11.18□□□□□ -0.62
CIT-201ENST00000261833 GBP6Q6ZN66 633 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 FAM76AQ8TAV0 307 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 DNAI1Q9UI46 699 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 CAMSAP1Q5T5Y3 1602 aa11.18□□□□□ -0.62
CIT-201ENST00000261833 PPLO60437 1756 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 LARP1Q6PKG0 1096 aaKnown RBP11.17□□□□□ -0.62
CIT-201ENST00000261833 MAATS1Q7Z4T9 603 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 PTGS1P23219 599 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.17□□□□□ -0.621e-6■□□□□ 8.6
CIT-201ENST00000261833 MICALL1Q8N3F8 863 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 CPSF2Q9P2I0 782 aaKnown RBP11.17□□□□□ -0.62
CIT-201ENST00000261833 NUP153P49790 1475 aaKnown RBP11.17□□□□□ -0.62
CIT-201ENST00000261833 CCDC96Q2M329 555 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 CCDC121Q6ZUS5 278 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 ATP7AQ04656 1500 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 ZNF213O14771 459 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 RASAL2Q9UJF2 1139 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 TTC41PQ6P2S7 1318 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 CYLC1P35663 651 aaPredicted RBP11.17□□□□□ -0.62
CIT-201ENST00000261833 ZFP91Q96JP5 570 aaPredicted RBP11.17□□□□□ -0.62
CIT-201ENST00000261833 STRN4Q9NRL3 753 aa11.17□□□□□ -0.62
CIT-201ENST00000261833 BMP15O95972 392 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 DNM1Q05193 864 aaKnown RBP11.16□□□□□ -0.62
CIT-201ENST00000261833 MSH6P52701 1360 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 CCDC186Q7Z3E2 898 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 NEK1Q96PY6 1258 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 ELP1O95163 1332 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 MYO1BO43795 1136 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 TTF1Q15361 905 aaPredicted RBP11.16□□□□□ -0.62
CIT-201ENST00000261833 MTMR7Q9Y216 660 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 SSH2Q76I76 1423 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 RBM5P52756 815 aaKnown RBP eCLIP11.16□□□□□ -0.62
CIT-201ENST00000261833 PPP2R3AQ06190 1150 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
CIT-201ENST00000261833 UTP14CQ5TAP6 766 aaKnown RBP11.16□□□□□ -0.62
CIT-201ENST00000261833 C6orf163Q5TEZ5 329 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 STK11IPQ8N1F8 1099 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 AOPEPQ8N6M6 819 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 RIMS2Q9UQ26 1411 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 C10orf67Q8IYJ2 551 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 CCDC155Q8N6L0 562 aa11.16□□□□□ -0.62
CIT-201ENST00000261833 ABCA9Q8IUA7 1624 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms