RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 AXIN2Q9Y2T1 843 aa22.94■■□□□ 1.26
SCARB1-201ENST00000261693 TAF5LO75529 589 aa22.94■■□□□ 1.26
SCARB1-201ENST00000261693 PIP4K2AP48426 406 aaPredicted RBP22.94■■□□□ 1.26
SCARB1-201ENST00000261693 LEO1Q8WVC0 666 aaPredicted RBP22.94■■□□□ 1.26
SCARB1-201ENST00000261693 DDX11Q96FC9 970 aa22.94■■□□□ 1.26
SCARB1-201ENST00000261693 ARHGEF25Q86VW2 580 aa22.93■■□□□ 1.26
SCARB1-201ENST00000261693 MYD88Q99836 296 aa22.93■■□□□ 1.26
SCARB1-201ENST00000261693 SCAND2PQ9GZW5 306 aaPredicted RBP22.93■■□□□ 1.26
SCARB1-201ENST00000261693 GOLGA6L6A8MZA4 724 aa22.93■■□□□ 1.26
SCARB1-201ENST00000261693 CCDC129Q6ZRS4 1044 aa22.93■■□□□ 1.26
SCARB1-201ENST00000261693 NEURL1BA8MQ27 555 aa22.92■■□□□ 1.26
SCARB1-201ENST00000261693 CBX8Q9HC52 389 aa22.92■■□□□ 1.26
SCARB1-201ENST00000261693 KIF3AQ9Y496 699 aa22.92■■□□□ 1.26
SCARB1-201ENST00000261693 ADGRL3Q9HAR2 1447 aa22.92■■□□□ 1.26
SCARB1-201ENST00000261693 FER1L4A9Z1Z3 1794 aa22.92■■□□□ 1.26
SCARB1-201ENST00000261693 NR1I2O75469 434 aa22.92■■□□□ 1.26
SCARB1-201ENST00000261693 NEXNQ0ZGT2 675 aa22.92■■□□□ 1.26
SCARB1-201ENST00000261693 XAGE3Q8WTP9 111 aa22.92■■□□□ 1.26
SCARB1-201ENST00000261693 ORAI2Q96SN7 254 aa22.92■■□□□ 1.26
SCARB1-201ENST00000261693 CCDC9Q9Y3X0 531 aaKnown RBP22.92■■□□□ 1.26
SCARB1-201ENST00000261693 COL15A1P39059 1388 aa22.92■■□□□ 1.26
SCARB1-201ENST00000261693 NCAPD2Q15021 1401 aa22.92■■□□□ 1.26
SCARB1-201ENST00000261693 GTF2F1P35269 517 aaKnown RBP eCLIP22.91■■□□□ 1.265e-7■■■□□ 18.9
SCARB1-201ENST00000261693 GCKRQ14397 625 aa22.91■■□□□ 1.26
SCARB1-201ENST00000261693 COPS6Q7L5N1 327 aa22.91■■□□□ 1.26
SCARB1-201ENST00000261693 DRC7Q8IY82 874 aa22.91■■□□□ 1.26
SCARB1-201ENST00000261693 BICD2Q8TD16 824 aa22.91■■□□□ 1.26
SCARB1-201ENST00000261693 SEC62Q99442 399 aaKnown RBP22.91■■□□□ 1.26
SCARB1-201ENST00000261693 LRRC2Q9BYS8 371 aa22.91■■□□□ 1.26
SCARB1-201ENST00000261693 DBNLQ9UJU6 430 aaKnown RBP22.91■■□□□ 1.26
SCARB1-201ENST00000261693 NPHP3Q7Z494 1330 aa22.9■■□□□ 1.26
SCARB1-201ENST00000261693 HSP90B1P14625 803 aaKnown RBP22.9■■□□□ 1.26
SCARB1-201ENST00000261693 KLHL34Q8N239 644 aa22.9■■□□□ 1.26
SCARB1-201ENST00000261693 DNAJC2Q99543 621 aaKnown RBP22.9■■□□□ 1.26
SCARB1-201ENST00000261693 HMG20BQ9P0W2 317 aa22.9■■□□□ 1.26
SCARB1-201ENST00000261693 TPM3P06753 285 aa22.9■■□□□ 1.26
SCARB1-201ENST00000261693 PGBD1Q96JS3 809 aa22.9■■□□□ 1.26
SCARB1-201ENST00000261693 NRBP1Q9UHY1 535 aa22.9■■□□□ 1.26
SCARB1-201ENST00000261693 CEBPZQ03701 1054 aaKnown RBP22.89■■□□□ 1.26
SCARB1-201ENST00000261693 TFCP2Q12800 502 aa22.89■■□□□ 1.26
SCARB1-201ENST00000261693 BRF1Q92994 677 aa22.89■■□□□ 1.26
SCARB1-201ENST00000261693 PDIA4P13667 645 aaKnown RBP22.89■■□□□ 1.25
SCARB1-201ENST00000261693 FOSBP53539 338 aa22.89■■□□□ 1.25
SCARB1-201ENST00000261693 LRMPQ12912 555 aa22.89■■□□□ 1.25
SCARB1-201ENST00000261693 ZNF790Q6PG37 636 aa22.89■■□□□ 1.25
SCARB1-201ENST00000261693 Q6ZUG5 572 aa22.89■■□□□ 1.25
SCARB1-201ENST00000261693 CCDC186Q7Z3E2 898 aa22.89■■□□□ 1.25
SCARB1-201ENST00000261693 CCDC94Q9BW85 323 aaPredicted RBP22.89■■□□□ 1.25
SCARB1-201ENST00000261693 GTF3C6Q969F1 213 aa22.88■■□□□ 1.25
SCARB1-201ENST00000261693 NEK1Q96PY6 1258 aa22.88■■□□□ 1.25
SCARB1-201ENST00000261693 TRIM5Q9C035 493 aa22.88■■□□□ 1.25
SCARB1-201ENST00000261693 ALDH8A1Q9H2A2 487 aaPredicted RBP22.88■■□□□ 1.25
SCARB1-201ENST00000261693 CLSTN2Q9H4D0 955 aa22.88■■□□□ 1.25
SCARB1-201ENST00000261693 PRDM10Q9NQV6 1147 aa22.88■■□□□ 1.25
SCARB1-201ENST00000261693 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.88■■□□□ 1.25
SCARB1-201ENST00000261693 RIOK3O14730 519 aaKnown RBP22.88■■□□□ 1.25
SCARB1-201ENST00000261693 BCL2L12Q9HB09 334 aa22.88■■□□□ 1.25
SCARB1-201ENST00000261693 DNAJC25Q9H1X3 360 aa22.87■■□□□ 1.25
SCARB1-201ENST00000261693 DDX19AQ9NUU7 478 aaKnown RBP22.87■■□□□ 1.25
SCARB1-201ENST00000261693 H3BQV1 296 aa22.87■■□□□ 1.25
SCARB1-201ENST00000261693 CHAF1AQ13111 956 aaPredicted RBP22.87■■□□□ 1.25
SCARB1-201ENST00000261693 TSGA10IPQ3SY00 556 aa22.87■■□□□ 1.25
SCARB1-201ENST00000261693 IFFO2Q5TF58 517 aa22.87■■□□□ 1.25
SCARB1-201ENST00000261693 TNNI3KQ59H18 835 aa22.86■■□□□ 1.25
SCARB1-201ENST00000261693 NFATC2IPQ8NCF5 419 aa22.86■■□□□ 1.25
SCARB1-201ENST00000261693 FPGT-TNNI3KV9GXZ4 949 aa22.86■■□□□ 1.25
SCARB1-201ENST00000261693 USPL1Q5W0Q7 1092 aa22.86■■□□□ 1.25
SCARB1-201ENST00000261693 DDX46Q7L014 1031 aaKnown RBP22.86■■□□□ 1.25
SCARB1-201ENST00000261693 JCADQ9P266 1359 aa22.86■■□□□ 1.25
SCARB1-201ENST00000261693 OVOS2A0A0G2JMS6 1433 aa22.85■■□□□ 1.25
SCARB1-201ENST00000261693 ATP5JP18859 108 aa22.85■■□□□ 1.25
SCARB1-201ENST00000261693 UBE3BQ7Z3V4 1068 aa22.85■■□□□ 1.25
SCARB1-201ENST00000261693 METTL22Q9BUU2 404 aaPredicted RBP22.85■■□□□ 1.25
SCARB1-201ENST00000261693 SIPA1L3O60292 1781 aaPredicted RBP22.85■■□□□ 1.25
SCARB1-201ENST00000261693 CYP21A2P08686 494 aa22.85■■□□□ 1.25
SCARB1-201ENST00000261693 ZNF165P49910 485 aa22.85■■□□□ 1.25
SCARB1-201ENST00000261693 FGD1P98174 961 aa22.85■■□□□ 1.25
SCARB1-201ENST00000261693 RESTQ13127 1097 aa22.85■■□□□ 1.25
SCARB1-201ENST00000261693 DBNDD2Q9BQY9 259 aa22.85■■□□□ 1.25
SCARB1-201ENST00000261693 PPFIA3O75145 1194 aa22.84■■□□□ 1.25
SCARB1-201ENST00000261693 PTPN12Q05209 780 aaKnown RBP22.84■■□□□ 1.25
SCARB1-201ENST00000261693 KRT32Q14532 448 aa22.84■■□□□ 1.25
SCARB1-201ENST00000261693 ZNF609O15014 1411 aa22.84■■□□□ 1.25
SCARB1-201ENST00000261693 ATP5J2-PTCD1G3V325 749 aa22.84■■□□□ 1.25
SCARB1-201ENST00000261693 PTCD1O75127 700 aaKnown RBP22.84■■□□□ 1.25
SCARB1-201ENST00000261693 ZC3H6P61129 1189 aaKnown RBP22.84■■□□□ 1.25
SCARB1-201ENST00000261693 SLFNL1Q499Z3 407 aa22.84■■□□□ 1.25
SCARB1-201ENST00000261693 PHRF1Q9P1Y6 1649 aaKnown RBP22.84■■□□□ 1.25
SCARB1-201ENST00000261693 ZNF75DP51815 510 aa22.83■■□□□ 1.25
SCARB1-201ENST00000261693 C5P01031 1676 aa22.83■■□□□ 1.25
SCARB1-201ENST00000261693 SCRN1Q12765 414 aa22.83■■□□□ 1.25
SCARB1-201ENST00000261693 RBM43Q6ZSC3 357 aaKnown RBP22.83■■□□□ 1.25
SCARB1-201ENST00000261693 ANKRD13DQ6ZTN6 518 aa22.83■■□□□ 1.25
SCARB1-201ENST00000261693 ZNF496Q96IT1 587 aaPredicted RBP22.83■■□□□ 1.25
SCARB1-201ENST00000261693 FTOQ9C0B1 505 aaKnown RBP eCLIP22.83■■□□□ 1.25
SCARB1-201ENST00000261693 COPRSQ9NQ92 184 aa22.83■■□□□ 1.25
SCARB1-201ENST00000261693 USP16Q9Y5T5 823 aa22.83■■□□□ 1.25
SCARB1-201ENST00000261693 RFX5P48382 616 aaPredicted RBP22.82■■□□□ 1.24
SCARB1-201ENST00000261693 RGPD5Q99666 1765 aa22.82■■□□□ 1.24
SCARB1-201ENST00000261693 PPP4R3BQ5MIZ7 849 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms