RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 ARID4AP29374 1257 aaPredicted RBP6.04□□□□□ -1.44
CDRT1-201ENST00000261644 WEE1P30291 646 aa6.04□□□□□ -1.44
CDRT1-201ENST00000261644 NRLP54845 237 aa6.04□□□□□ -1.44
CDRT1-201ENST00000261644 CRTC2Q53ET0 693 aaPredicted RBP6.04□□□□□ -1.44
CDRT1-201ENST00000261644 DHX32Q7L7V1 743 aaKnown RBP6.04□□□□□ -1.44
CDRT1-201ENST00000261644 NBPF11Q86T75 865 aa6.04□□□□□ -1.44
CDRT1-201ENST00000261644 PROSER2Q86WR7 435 aaPredicted RBP6.04□□□□□ -1.44
CDRT1-201ENST00000261644 NGLY1Q96IV0 654 aa6.04□□□□□ -1.44
CDRT1-201ENST00000261644 ZFATQ9P243 1243 aa6.04□□□□□ -1.44
CDRT1-201ENST00000261644 USP21Q9UK80 565 aa6.04□□□□□ -1.44
CDRT1-201ENST00000261644 RNF112Q9ULX5 631 aa6.04□□□□□ -1.44
CDRT1-201ENST00000261644 ZBTB42B2RXF5 422 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L15C9J2P7 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L10C9JJH3 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L13C9JLJ4 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L12C9JPN9 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L11C9JVI0 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L21D6R901 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L18D6R9N7 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L22D6RA61 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L17D6RBQ6 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L19D6RCP7 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L20D6RJB6 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 USP17L24Q0WX57 530 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 DPYDQ12882 1025 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 PERM1Q5SV97 790 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 ANKMY2Q8IV38 441 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 DCAF11Q8TEB1 546 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 CHMP7Q8WUX9 453 aaPredicted RBP6.03□□□□□ -1.44
CDRT1-201ENST00000261644 WFDC12Q8WWY7 111 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 PPP1R12CQ9BZL4 782 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 IGFLR1Q9H665 355 aa6.03□□□□□ -1.44
CDRT1-201ENST00000261644 QTRT2Q9H974 415 aaKnown RBP6.03□□□□□ -1.44
CDRT1-201ENST00000261644 DLL1O00548 723 aa6.02□□□□□ -1.45
CDRT1-201ENST00000261644 HYAL3O43820 417 aaPredicted RBP6.02□□□□□ -1.45
CDRT1-201ENST00000261644 WFDC8Q8IUA0 241 aa6.02□□□□□ -1.45
CDRT1-201ENST00000261644 IFT43Q96FT9 208 aa6.02□□□□□ -1.45
CDRT1-201ENST00000261644 ARXQ96QS3 562 aa6.02□□□□□ -1.45
CDRT1-201ENST00000261644 HINFPQ9BQA5 517 aa6.02□□□□□ -1.45
CDRT1-201ENST00000261644 GTF3C3Q9Y5Q9 886 aa6.02□□□□□ -1.45
CDRT1-201ENST00000261644 MICAL2O94851 1124 aa6.01□□□□□ -1.45
CDRT1-201ENST00000261644 CPB1P15086 417 aa6.01□□□□□ -1.45
CDRT1-201ENST00000261644 NOS3P29474 1203 aa6.01□□□□□ -1.45
CDRT1-201ENST00000261644 SOX18P35713 384 aa6.01□□□□□ -1.45
CDRT1-201ENST00000261644 C11orf91Q3C1V1 193 aa6.01□□□□□ -1.45
CDRT1-201ENST00000261644 ELMSAN1Q6PJG2 1045 aa6.01□□□□□ -1.45
CDRT1-201ENST00000261644 Q6ZS46 218 aa6.01□□□□□ -1.45
CDRT1-201ENST00000261644 MAP4K3Q8IVH8 894 aa6.01□□□□□ -1.45
CDRT1-201ENST00000261644 DZIP1LQ8IYY4 767 aaKnown RBP6.01□□□□□ -1.45
CDRT1-201ENST00000261644 CACTIN-AS1Q8N1I8 211 aa6.01□□□□□ -1.45
CDRT1-201ENST00000261644 TMEM130Q8N3G9 435 aa6.01□□□□□ -1.45
CDRT1-201ENST00000261644 DEAF1O75398 565 aaPredicted RBP6□□□□□ -1.45
CDRT1-201ENST00000261644 RARAP10276 462 aa6□□□□□ -1.45
CDRT1-201ENST00000261644 ZEB1P37275 1124 aaPredicted RBP6□□□□□ -1.45
CDRT1-201ENST00000261644 DGKZQ13574 1117 aa6□□□□□ -1.45
CDRT1-201ENST00000261644 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6□□□□□ -1.45
CDRT1-201ENST00000261644 TLR7Q9NYK1 1049 aaKnown RBP6□□□□□ -1.45
CDRT1-201ENST00000261644 KLK14Q9P0G3 267 aa6□□□□□ -1.45
CDRT1-201ENST00000261644 A6NJR5 290 aa5.99□□□□□ -1.45
CDRT1-201ENST00000261644 TARSP26639 723 aaKnown RBP5.99□□□□□ -1.45
CDRT1-201ENST00000261644 IREB2P48200 963 aaKnown RBP5.99□□□□□ -1.45
CDRT1-201ENST00000261644 PRR23CQ6ZRP0 262 aa5.99□□□□□ -1.45
CDRT1-201ENST00000261644 KRTAP1-3Q8IUG1 177 aa5.99□□□□□ -1.45
CDRT1-201ENST00000261644 MEGF10Q96KG7 1140 aa5.99□□□□□ -1.45
CDRT1-201ENST00000261644 MRPL18Q9H0U6 180 aaKnown RBP5.99□□□□□ -1.45
CDRT1-201ENST00000261644 VRTNQ9H8Y1 702 aa5.99□□□□□ -1.45
CDRT1-201ENST00000261644 SUPT5HO00267 1087 aaKnown RBP5.98□□□□□ -1.45
CDRT1-201ENST00000261644 OPLAHO14841 1288 aa5.98□□□□□ -1.45
CDRT1-201ENST00000261644 PLAURQ03405 335 aa5.98□□□□□ -1.45
CDRT1-201ENST00000261644 RTCBQ9Y3I0 505 aaKnown RBP5.98□□□□□ -1.45
CDRT1-201ENST00000261644 SASH3O75995 380 aa5.97□□□□□ -1.45
CDRT1-201ENST00000261644 CLUAP1Q96AJ1 413 aa5.97□□□□□ -1.45
CDRT1-201ENST00000261644 SMG9Q9H0W8 520 aaKnown RBP5.97□□□□□ -1.45
CDRT1-201ENST00000261644 AKTIPQ9H8T0 292 aa5.97□□□□□ -1.45
CDRT1-201ENST00000261644 MYO15BQ96JP2 1530 aa5.97□□□□□ -1.45
CDRT1-201ENST00000261644 SWI5Q1ZZU3 235 aa5.96□□□□□ -1.46
CDRT1-201ENST00000261644 LCE3BQ5TA77 95 aa5.96□□□□□ -1.46
CDRT1-201ENST00000261644 KRT25Q7Z3Z0 450 aa5.96□□□□□ -1.46
CDRT1-201ENST00000261644 COL26A1Q96A83 441 aa5.96□□□□□ -1.46
CDRT1-201ENST00000261644 VTI1AQ96AJ9 217 aa5.96□□□□□ -1.46
CDRT1-201ENST00000261644 PLD4Q96BZ4 506 aa5.96□□□□□ -1.46
CDRT1-201ENST00000261644 CALR3Q96L12 384 aaKnown RBP5.96□□□□□ -1.46
CDRT1-201ENST00000261644 MUC3BQ9H195 1237 aa5.96□□□□□ -1.46
CDRT1-201ENST00000261644 LRFN2Q9ULH4 789 aa5.96□□□□□ -1.46
CDRT1-201ENST00000261644 KCNMB2Q9Y691 235 aa5.96□□□□□ -1.46
CDRT1-201ENST00000261644 LOC102724428A0A0B4J2F2 783 aa5.95□□□□□ -1.46
CDRT1-201ENST00000261644 F8W735 103 aaPredicted RBP5.95□□□□□ -1.46
CDRT1-201ENST00000261644 XYLBO75191 536 aa5.95□□□□□ -1.46
CDRT1-201ENST00000261644 PSAPP07602 524 aa5.95□□□□□ -1.46
CDRT1-201ENST00000261644 EIF2AK2P19525 551 aaKnown RBP5.95□□□□□ -1.46
CDRT1-201ENST00000261644 SIK1P57059 783 aa5.95□□□□□ -1.46
CDRT1-201ENST00000261644 TRIM26Q12899 539 aaPredicted RBP5.95□□□□□ -1.46
CDRT1-201ENST00000261644 SHROOM4Q9ULL8 1493 aa5.95□□□□□ -1.46
CDRT1-201ENST00000261644 GSC2O15499 205 aa5.94□□□□□ -1.46
CDRT1-201ENST00000261644 FSTP19883 344 aa5.94□□□□□ -1.46
CDRT1-201ENST00000261644 LMOD1P29536 600 aaPredicted RBP5.94□□□□□ -1.46
CDRT1-201ENST00000261644 MLLT1Q03111 559 aaPredicted RBP5.94□□□□□ -1.46
CDRT1-201ENST00000261644 SETDB1Q15047 1291 aa5.94□□□□□ -1.46
CDRT1-201ENST00000261644 TREML1Q86YW5 311 aa5.94□□□□□ -1.46
CDRT1-201ENST00000261644 RBSNQ9H1K0 784 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms