RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 RAB34Q9BZG1 259 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 ARHGAP5Q13017 1502 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 NCOA1Q15788 1441 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 SSRP1Q08945 709 aaKnown RBP8.16□□□□□ -1.1
HERC2-201ENST00000261609 VCXQ9H320 206 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 VEZTQ9HBM0 779 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.16□□□□□ -1.1
HERC2-201ENST00000261609 FANCD2Q9BXW9 1451 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 PTPRCP08575 1304 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 CCDC38Q502W7 563 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 PPP1R12CQ9BZL4 782 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 LOC102724159A0A0B4J2E5 919 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 MYO1BO43795 1136 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 PWP2Q15269 919 aaKnown RBP8.16□□□□□ -1.1
HERC2-201ENST00000261609 BOLA2Q9H3K6 86 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 HOMER2Q9NSB8 354 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 RPGRIP1LQ68CZ1 1315 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 ZNF853P0CG23 659 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 WHAMMP3Q1A5X7 153 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 RNF168Q8IYW5 571 aaPredicted RBP8.16□□□□□ -1.1
HERC2-201ENST00000261609 SELENOSQ9BQE4 189 aa8.16□□□□□ -1.1
HERC2-201ENST00000261609 NSD3Q9BZ95 1437 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 DNM1Q05193 864 aaKnown RBP8.15□□□□□ -1.1
HERC2-201ENST00000261609 JRKLQ9Y4A0 524 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 NECAB1Q8N987 351 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 CARD6Q9BX69 1037 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 TRIM21P19474 475 aaKnown RBP8.15□□□□□ -1.1
HERC2-201ENST00000261609 TTC14Q96N46 770 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 PPP1R9BQ96SB3 815 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 KCNK9Q9NPC2 374 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 BTBD11A6QL63 1104 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 CEP128Q6ZU80 1094 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 RBM42Q9BTD8 480 aaKnown RBP8.15□□□□□ -1.1
HERC2-201ENST00000261609 CIB2O75838 187 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 E2F4Q16254 413 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 TDRD12Q587J7 1177 aaKnown RBP8.15□□□□□ -1.1
HERC2-201ENST00000261609 NEK11Q8NG66 645 aa8.15□□□□□ -1.1
HERC2-201ENST00000261609 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.15□□□□□ -1.1
HERC2-201ENST00000261609 ARFGAP2Q8N6H7 521 aa8.15□□□□□ -1.11
HERC2-201ENST00000261609 SEC62Q99442 399 aaKnown RBP8.15□□□□□ -1.11
HERC2-201ENST00000261609 FRMD3A2A2Y4 597 aa8.15□□□□□ -1.11
HERC2-201ENST00000261609 RLBP1P12271 317 aa8.15□□□□□ -1.11
HERC2-201ENST00000261609 PPP1R14CQ8TAE6 165 aa8.15□□□□□ -1.11
HERC2-201ENST00000261609 ATAD2BQ9ULI0 1458 aa8.15□□□□□ -1.11
HERC2-201ENST00000261609 AKAP2Q9Y2D5 859 aa8.15□□□□□ -1.11
HERC2-201ENST00000261609 DIXDC1Q155Q3 683 aa8.15□□□□□ -1.11
HERC2-201ENST00000261609 MXRA7P84157 204 aa8.15□□□□□ -1.11
HERC2-201ENST00000261609 CETN1Q12798 172 aa8.15□□□□□ -1.11
HERC2-201ENST00000261609 AOPEPQ8N6M6 819 aa8.15□□□□□ -1.11
HERC2-201ENST00000261609 CYLC1P35663 651 aaPredicted RBP8.14□□□□□ -1.11
HERC2-201ENST00000261609 ZNF76P36508 570 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 TMEM266Q2M3C6 531 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 ZNF692Q9BU19 519 aaPredicted RBP8.14□□□□□ -1.11
HERC2-201ENST00000261609 RMND1Q9NWS8 449 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 CCDC77Q9BR77 488 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 TCHPQ9BT92 498 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 LUC7L2Q9Y383 392 aaKnown RBP8.14□□□□□ -1.11
HERC2-201ENST00000261609 EFCAB5A4FU69 1503 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 SDSP20132 328 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 AMPD3Q01432 767 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 MICAL1Q8TDZ2 1067 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 STMN2Q93045 179 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 USP16Q9Y5T5 823 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 KRT83P78385 493 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 MAP3K9P80192 1104 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 TRIM4Q9C037 500 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 CWC25Q9NXE8 425 aaPredicted RBP8.14□□□□□ -1.11
HERC2-201ENST00000261609 SMIM23A6NLE4 172 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 MYL6BP14649 208 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 CFAP58Q5T655 872 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 RAB3IL1Q8TBN0 382 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 LRP2BPQ9P2M1 347 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 BAG1Q99933 345 aaPredicted RBP8.14□□□□□ -1.11
HERC2-201ENST00000261609 CEP120Q8N960 986 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 PPFIBP2Q8ND30 876 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 AKR1B10O60218 316 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 DBN1Q16643 649 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 GUCA1BQ9UMX6 200 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 CABP4P57796 275 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 TSNAXIP1Q2TAA8 658 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 TIAM1Q13009 1591 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 KIF5AQ12840 1032 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 CATIPQ7Z7H3 387 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 RAB11FIP4Q86YS3 637 aa8.14□□□□□ -1.11
HERC2-201ENST00000261609 RNF41Q9H4P4 317 aaPredicted RBP8.14□□□□□ -1.11
HERC2-201ENST00000261609 LMOD1P29536 600 aaPredicted RBP8.13□□□□□ -1.11
HERC2-201ENST00000261609 HSP90AA4PQ58FG1 418 aa8.13□□□□□ -1.11
HERC2-201ENST00000261609 IKBKGQ9Y6K9 419 aa8.13□□□□□ -1.11
HERC2-201ENST00000261609 FGD5Q6ZNL6 1462 aa8.13□□□□□ -1.11
HERC2-201ENST00000261609 KCNG4Q8TDN1 519 aa8.13□□□□□ -1.11
HERC2-201ENST00000261609 SPG7Q9UQ90 795 aa8.13□□□□□ -1.11
HERC2-201ENST00000261609 GNAT3A8MTJ3 354 aa8.13□□□□□ -1.11
HERC2-201ENST00000261609 NOL3O60936 208 aaKnown RBP8.13□□□□□ -1.11
HERC2-201ENST00000261609 SLC8A1P32418 973 aa8.13□□□□□ -1.11
HERC2-201ENST00000261609 IDH1O75874 414 aaKnown RBP8.13□□□□□ -1.11
HERC2-201ENST00000261609 HPDP32754 393 aaPredicted RBP8.13□□□□□ -1.11
HERC2-201ENST00000261609 CEP85LQ5SZL2 805 aa8.13□□□□□ -1.11
HERC2-201ENST00000261609 FAM184BQ9ULE4 1060 aa8.13□□□□□ -1.11
HERC2-201ENST00000261609 PDE1CQ14123 709 aaPredicted RBP8.13□□□□□ -1.11
HERC2-201ENST00000261609 ZC3H6P61129 1189 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms