RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 LEKR1Q6ZMV7 388 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 CNKSR2Q8WXI2 1034 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 SLC26A8Q96RN1 970 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 PLEKHG2Q9H7P9 1386 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 GRM8O00222 908 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 POLR3DP05423 398 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-202ENST00000261517 BRPF1P55201 1214 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-202ENST00000261517 TAOK2Q9UL54 1235 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 PLA2R1Q13018 1463 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 ERVV-2B6SEH9 535 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 MFSD6Q6ZSS7 791 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 BBXQ8WY36 941 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-202ENST00000261517 CDK12Q9NYV4 1490 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-202ENST00000261517 MPHOSPH10O00566 681 aaKnown RBP4.98□□□□□ -1.61
VPS13C-202ENST00000261517 TMEM132AQ24JP5 1023 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 MKNK2Q9HBH9 465 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 FRMPD1Q5SYB0 1578 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 CCDC181Q5TID7 509 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 BICDL1Q6ZP65 573 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 CCDC91Q7Z6B0 441 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 FILIP1Q7Z7B0 1213 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 CRACR2BQ8N4Y2 399 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 CCDC94Q9BW85 323 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 INCENPQ9NQS7 918 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 ANKIB1Q9P2G1 1089 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 CCDC194A0A1B0GVG4 234 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 SFPQP23246 707 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 MCM4P33991 863 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 MSANTD4Q8NCY6 345 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 HELLSQ9NRZ9 838 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 CARMIL3Q8ND23 1372 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 TRIM27P14373 513 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 TRMT112Q9UI30 125 aaKnown RBP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 BICDL2A1A5D9 508 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 DLC1Q96QB1 1528 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 NF2P35240 595 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 FKBP4Q02790 459 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 TSR2Q969E8 191 aaKnown RBP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 MBD5Q9P267 1494 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 YEATS4O95619 227 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 GNA11P29992 359 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 ATP8B2P98198 1209 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 NECTIN2Q92692 538 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 GOLGA6L10A0A0M3HER8 536 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 RRS1Q15050 365 aaKnown RBP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 CCAR2Q8N163 923 aaKnown RBP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 STMN4Q9H169 189 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 CAMSAP1Q5T5Y3 1602 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 DDX54Q8TDD1 881 aaKnown RBP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 TNNI2P48788 182 aa4.97□□□□□ -1.61
VPS13C-202ENST00000261517 UTP14AQ9BVJ6 771 aaKnown RBP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 IQSEC3Q9UPP2 1182 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-202ENST00000261517 RNF123Q5XPI4 1314 aa4.96□□□□□ -1.61
VPS13C-202ENST00000261517 KIF5CO60282 957 aa4.96□□□□□ -1.61
VPS13C-202ENST00000261517 TBC1D22AQ8WUA7 517 aa4.96□□□□□ -1.61
VPS13C-202ENST00000261517 ADGRB3O60242 1522 aa4.96□□□□□ -1.61
VPS13C-202ENST00000261517 ANKRD62A6NC57 917 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 SNX16P57768 344 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 NLRP3Q96P20 1036 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.96□□□□□ -1.623e-10■■■■■ 94.2
VPS13C-202ENST00000261517 PAXBP1Q9Y5B6 917 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 ERVK-7P63135 1459 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 PTPRKQ15262 1439 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 FYB1O15117 783 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 CKAP4Q07065 602 aaKnown RBP4.96□□□□□ -1.62
VPS13C-202ENST00000261517 TPTE2Q6XPS3 522 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 KIF18AQ8NI77 898 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 TBC1D32Q96NH3 1257 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 USP32Q8NFA0 1604 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 GCOM1H8Y6P7 765 aaPredicted RBP4.96□□□□□ -1.62
VPS13C-202ENST00000261517 MYZAPP0CAP1 466 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 RFC4P35249 363 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 TRIM14Q14142 442 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 ABCC3O15438 1527 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 MCMDC2Q4G0Z9 681 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 SREK1Q8WXA9 508 aaKnown RBP4.96□□□□□ -1.62
VPS13C-202ENST00000261517 HAUS2Q9NVX0 235 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 QRICH2Q9H0J4 1663 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 ATP10DQ9P241 1426 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 RAD21O60216 631 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 MICALCLQ6ZW33 695 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 TMOD4Q9NZQ9 345 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 GLI2P10070 1586 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 SEPT7Q16181 437 aaKnown RBP4.96□□□□□ -1.62
VPS13C-202ENST00000261517 CROCCP2Q86T23 111 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 LMBR1Q8WVP7 490 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 TESK2Q96S53 571 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 SETDB2Q96T68 719 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 GRPEL1Q9HAV7 217 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 PRM3Q9NNZ6 103 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 TSGA10Q9BZW7 698 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 DENND2AQ9ULE3 1009 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 A0A1W2PP64 1363 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 KIAA0754O94854 1291 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 MYL6BP14649 208 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 ARHGAP29Q52LW3 1261 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 PRIMPOLQ96LW4 560 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 MBIPQ9NS73 344 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 AGLP35573 1532 aa4.96□□□□□ -1.62
VPS13C-202ENST00000261517 RPAP1Q9BWH6 1393 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms