RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 BRIP1Q9BX63 1249 aa19.75■□□□□ 0.75
CCDC90B-201ENST00000260054 ANKRD31Q8N7Z5 1873 aa19.74■□□□□ 0.75
CCDC90B-201ENST00000260054 SF3B3Q15393 1217 aaKnown RBP19.74■□□□□ 0.75
CCDC90B-201ENST00000260054 GTF3C3Q9Y5Q9 886 aa19.74■□□□□ 0.75
CCDC90B-201ENST00000260054 C10orf71Q711Q0 1435 aa19.73■□□□□ 0.75
CCDC90B-201ENST00000260054 SRGAP3O43295 1099 aa19.73■□□□□ 0.75
CCDC90B-201ENST00000260054 FAM161AQ3B820 660 aa19.73■□□□□ 0.75
CCDC90B-201ENST00000260054 GREM2Q9H772 168 aa19.73■□□□□ 0.75
CCDC90B-201ENST00000260054 SPON1Q9HCB6 807 aa19.73■□□□□ 0.75
CCDC90B-201ENST00000260054 CHMP3Q9Y3E7 222 aa19.73■□□□□ 0.75
CCDC90B-201ENST00000260054 KLRG2A4D1S0 409 aaPredicted RBP19.72■□□□□ 0.75
CCDC90B-201ENST00000260054 POLA2Q14181 598 aa19.71■□□□□ 0.75
CCDC90B-201ENST00000260054 CRY2Q49AN0 593 aa19.71■□□□□ 0.75
CCDC90B-201ENST00000260054 CCDC152Q4G0S7 254 aa19.71■□□□□ 0.75
CCDC90B-201ENST00000260054 SSH3Q8TE77 659 aa19.71■□□□□ 0.75
CCDC90B-201ENST00000260054 RFX5P48382 616 aaPredicted RBP19.71■□□□□ 0.75
CCDC90B-201ENST00000260054 ITGA6P23229 1130 aa19.7■□□□□ 0.74
CCDC90B-201ENST00000260054 SEC31BQ9NQW1 1179 aa19.7■□□□□ 0.74
CCDC90B-201ENST00000260054 PPP4R2Q9NY27 417 aa19.7■□□□□ 0.74
CCDC90B-201ENST00000260054 RTL9Q8NET4 1388 aa19.69■□□□□ 0.74
CCDC90B-201ENST00000260054 IGHDP01880 384 aa19.69■□□□□ 0.74
CCDC90B-201ENST00000260054 PDE6BP35913 854 aa19.69■□□□□ 0.74
CCDC90B-201ENST00000260054 HDAC1Q13547 482 aaPredicted RBP19.69■□□□□ 0.74
CCDC90B-201ENST00000260054 HMMRO75330 724 aa19.68■□□□□ 0.74
CCDC90B-201ENST00000260054 IFIT5Q13325 482 aaKnown RBP19.68■□□□□ 0.74
CCDC90B-201ENST00000260054 CCDC57Q2TAC2 916 aa19.68■□□□□ 0.74
CCDC90B-201ENST00000260054 KLHDC4Q8TBB5 520 aa19.68■□□□□ 0.74
CCDC90B-201ENST00000260054 COL4A1P02462 1669 aa19.68■□□□□ 0.74
CCDC90B-201ENST00000260054 SRGNP10124 158 aa19.68■□□□□ 0.74
CCDC90B-201ENST00000260054 PA2G4Q9UQ80 394 aaKnown RBP19.68■□□□□ 0.74
CCDC90B-201ENST00000260054 KIF13BQ9NQT8 1826 aa19.67■□□□□ 0.74
CCDC90B-201ENST00000260054 ANKRD18BA2A2Z9 1011 aa19.67■□□□□ 0.74
CCDC90B-201ENST00000260054 COL11A2P13942 1736 aaPredicted RBP19.67■□□□□ 0.74
CCDC90B-201ENST00000260054 PTPN12Q05209 780 aaKnown RBP19.67■□□□□ 0.74
CCDC90B-201ENST00000260054 ZNF594Q96JF6 807 aaPredicted RBP19.67■□□□□ 0.74
CCDC90B-201ENST00000260054 CHRNA5P30532 468 aa19.66■□□□□ 0.74
CCDC90B-201ENST00000260054 B4GALNT3Q6L9W6 998 aa19.66■□□□□ 0.74
CCDC90B-201ENST00000260054 RPGRQ92834 1020 aaKnown RBP19.66■□□□□ 0.74
CCDC90B-201ENST00000260054 CCDC136Q96JN2 1154 aa19.66■□□□□ 0.74
CCDC90B-201ENST00000260054 RWDD1Q9H446 243 aaPredicted RBP19.66■□□□□ 0.74
CCDC90B-201ENST00000260054 HOXA10P31260 410 aaPredicted RBP19.65■□□□□ 0.74
CCDC90B-201ENST00000260054 DDX46Q7L014 1031 aaKnown RBP19.65■□□□□ 0.74
CCDC90B-201ENST00000260054 C2CD5Q86YS7 1000 aa19.65■□□□□ 0.74
CCDC90B-201ENST00000260054 CELF1Q92879 486 aaKnown RBP19.65■□□□□ 0.74
CCDC90B-201ENST00000260054 COPRSQ9NQ92 184 aa19.65■□□□□ 0.74
CCDC90B-201ENST00000260054 TAF1P21675 1872 aa19.65■□□□□ 0.74
CCDC90B-201ENST00000260054 PPP1R1BQ9UD71 204 aaPredicted RBP19.65■□□□□ 0.74
CCDC90B-201ENST00000260054 SRCAPQ6ZRS2 3230 aa19.65■□□□□ 0.74
CCDC90B-201ENST00000260054 H0YIN7 160 aa19.64■□□□□ 0.73
CCDC90B-201ENST00000260054 NPR1P16066 1061 aa19.64■□□□□ 0.73
CCDC90B-201ENST00000260054 CDC5LQ99459 802 aaKnown RBP19.64■□□□□ 0.73
CCDC90B-201ENST00000260054 SIL1Q9H173 461 aa19.64■□□□□ 0.73
CCDC90B-201ENST00000260054 DCTPP1Q9H773 170 aa19.64■□□□□ 0.73
CCDC90B-201ENST00000260054 EXOC6BQ9Y2D4 811 aa19.64■□□□□ 0.73
CCDC90B-201ENST00000260054 SURF6O75683 361 aaKnown RBP19.63■□□□□ 0.73
CCDC90B-201ENST00000260054 TAF7LQ5H9L4 462 aa19.63■□□□□ 0.73
CCDC90B-201ENST00000260054 KLHL34Q8N239 644 aa19.63■□□□□ 0.73
CCDC90B-201ENST00000260054 MASTLQ96GX5 879 aa19.63■□□□□ 0.73
CCDC90B-201ENST00000260054 RBM17Q96I25 401 aaKnown RBP19.63■□□□□ 0.73
CCDC90B-201ENST00000260054 PDZRN3Q9UPQ7 1066 aa19.63■□□□□ 0.73
CCDC90B-201ENST00000260054 NOP58Q9Y2X3 529 aaKnown RBP19.63■□□□□ 0.73
CCDC90B-201ENST00000260054 CD2APQ9Y5K6 639 aa19.63■□□□□ 0.73
CCDC90B-201ENST00000260054 LRP5O75197 1615 aa19.63■□□□□ 0.73
CCDC90B-201ENST00000260054 GRAPQ13588 217 aa19.62■□□□□ 0.73
CCDC90B-201ENST00000260054 ANKRD18AQ8IVF6 992 aa19.62■□□□□ 0.73
CCDC90B-201ENST00000260054 GRAPLQ8TC17 118 aaPredicted RBP19.62■□□□□ 0.73
CCDC90B-201ENST00000260054 CRAMP1Q96RY5 1269 aa19.62■□□□□ 0.73
CCDC90B-201ENST00000260054 PUS3Q9BZE2 481 aaKnown RBP19.62■□□□□ 0.73
CCDC90B-201ENST00000260054 KIAA1551Q9HCM1 1747 aa19.62■□□□□ 0.73
CCDC90B-201ENST00000260054 A0A0G2JLW4 131 aa19.62■□□□□ 0.73
CCDC90B-201ENST00000260054 DPEP1P16444 411 aa19.62■□□□□ 0.73
CCDC90B-201ENST00000260054 RPS8P62241 208 aaKnown RBP19.62■□□□□ 0.73
CCDC90B-201ENST00000260054 KDM2BQ8NHM5 1336 aa19.62■□□□□ 0.73
CCDC90B-201ENST00000260054 KCNA3P22001 575 aa19.61■□□□□ 0.73
CCDC90B-201ENST00000260054 IGHMBP2P38935 993 aaKnown RBP19.61■□□□□ 0.73
CCDC90B-201ENST00000260054 TGFB2P61812 414 aa19.61■□□□□ 0.73
CCDC90B-201ENST00000260054 LRRC24Q50LG9 513 aa19.61■□□□□ 0.73
CCDC90B-201ENST00000260054 STYK1Q6J9G0 422 aa19.61■□□□□ 0.73
CCDC90B-201ENST00000260054 LDHAL6AQ6ZMR3 332 aa19.61■□□□□ 0.73
CCDC90B-201ENST00000260054 ZNF622Q969S3 477 aaKnown RBP eCLIP19.61■□□□□ 0.73
CCDC90B-201ENST00000260054 EYA2O00167 538 aa19.6■□□□□ 0.73
CCDC90B-201ENST00000260054 ATG9AQ7Z3C6 839 aa19.6■□□□□ 0.73
CCDC90B-201ENST00000260054 SMC5Q8IY18 1101 aa19.6■□□□□ 0.73
CCDC90B-201ENST00000260054 SLC51AQ86UW1 340 aa19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 MPHOSPH8Q99549 860 aa19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 SPEF2Q9C093 1822 aa19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 DLEC1Q9Y238 1755 aa19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 CIAO1O76071 339 aa19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 ALDH1B1P30837 517 aa19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 G3BP1Q13283 466 aaKnown RBP eCLIP19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 GCC1Q96CN9 775 aa19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 FHDC1Q9C0D6 1143 aaPredicted RBP19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 BSDC1Q9NW68 430 aaPredicted RBP19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 FBXO3Q9UK99 471 aa19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 RIPOR2Q9Y4F9 1068 aa19.59■□□□□ 0.73
CCDC90B-201ENST00000260054 APBB1O00213 710 aa19.58■□□□□ 0.72
CCDC90B-201ENST00000260054 OS9Q13438 667 aaPredicted RBP19.58■□□□□ 0.72
CCDC90B-201ENST00000260054 NLGN2Q8NFZ4 835 aa19.58■□□□□ 0.72
CCDC90B-201ENST00000260054 CNNM1Q9NRU3 951 aa19.58■□□□□ 0.72
CCDC90B-201ENST00000260054 SASH1O94885 1247 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms